Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopus_20microsporus_20var._20microsporus_20[genbank_20GCA_5F00208 3745.1_202017-04-12] 560 sequences; 24,950,816 total letters Query= NC_027778.1 Length=124244 Score E Sequences producing significant alignments: (Bits) Value seq106 230 2e-55 seq59 104 2e-17 >seq106 Length=79482 Score = 230 bits (254), Expect = 2e-55 Identities = 587/880 (67%), Gaps = 30/880 (3%) Strand=Plus/Minus Query 43730 ATATGGCAAATGTACAAAAAAGCACAGGCGTCATTTTGGACAGCAGAAGAAGTTGATTTG 43789 || |||||| | || |||||||| | || || ||||||||||| |||||| | |||||| Sbjct 37945 ATCTGGCAATTCTATAAAAAAGCTGAAGCTTCCTTTTGGACAGCTGAAGAAATCGATTTG 37886 Query 43790 ACTAAAGA-CTTAGCACATTGGATTG---CATTAAAACCAC--AAGAAAAACAT---TTT 43840 | || || ||| ||| ||||| | |||| || || | ||| | ||| Sbjct 37885 AGCAAGGATCTT----CAT--GATTGGGAAAACAAAATGACCGAAAATGAACGTTTCTTT 37832 Query 43841 ATATCTTTGGTTTTGGCGTTTTTTGCTGCGAGCGACGGGATAGTCAATGAAAATTTGGTT 43900 || ||| || ||||| || ||||||| || || || || |||||||| |||||| Sbjct 37831 ATCTCTCGTGTCTTGGCCTTCTTTGCTGGTTCAGATGGCATTGTTAATGAAAACTTGGTT 37772 Query 43901 -AGTCGGTTTGCGCAAGAAGTTCAATTACCAGAAGCACGATGTTTTTATGGGTTTCAAAT 43959 | |||| | | ||||| | | || ||||| |||||| ||||| |||||||| Sbjct 37771 CAAAACTTTTGTG-ATGAAGTCAAGATTCCTGAAGCTAAATGTTTCTATGGCTTTCAAAT 37713 Query 43960 TGCCATAGAAAATATTCATTCGGAAATGTACAGTCTTCTGATAGATACGTACATCAAAGA 44019 || ||||| ||||| | |||| ||||||||| |||| || || || |||||||| Sbjct 37712 CATGATTGAAAACATTCACGCAGAAACTTACAGTCTTTTGATTGACACTTATATCAAAGA 37653 Query 44020 TGGGCACGAGAAGCATCGATTGTTTAATGCGATAGAAACAGTACCTGCGATTAAACATAA 44079 | || ||||| | | ||| ||| || || || | ||| || || || Sbjct 37652 TAACCAAGAGAAAGAAATGCTCTTTTCTGCTATTGACACTATCCCTTGTATCAAGAGAAA 37593 Query 44080 AGCAGACTGGGCCCTTAAATGGATAAATTCAAATGATTCTTTTGGAGAACGACTTGTCGC 44139 || || |||||| | || ||||| ||||| | ||| |||| || || ||||| || Sbjct 37592 GGCTGATTGGGCCTTCAAGTGGATTTCCTCAAACGGTTCCTTTGCTGAGCGCCTTGTTGC 37533 Query 44140 GTTTGCAGTTGTGGAAGGCATTTTCTTTTCAGGATCGTTTGCGGCCATATTTTGGTTAAA 44199 ||||| | ||| ||||| || ||||| || || || ||||| |||| |||||| | || Sbjct 37532 CTTTGCTGCTGTCGAAGGTATCTTCTTCTCTGGTTCCTTTGCTTCCATCTTTTGGCTCAA 37473 Query 44200 GAAACGAGGTTTGATGCCTGGGTTGACGTTTTCAAATGAGTTAATAAGTCGTGATGAAGG 44259 |||||| ||||||||||| || ||||| || ||||| || || ||||||||||||| Sbjct 37472 GAAACGTGGTTTGATGCCCGGTTTGACATTCAGCAATGAATTGATCTGTCGTGATGAAGG 37413 Query 44260 CTTACATTGCGATTTTGCTTGCTTGTTACTTGGATATCTAGGAGACGATAAGCCTTC-AT 44318 | ||| || |||||||| | ||| || | || | ||||| | | | Sbjct 37412 TCTTCATACTGACTTTGCTTGTCTTTTATTTACCCACCTTCG------TAAGCGTCCTAG 37359 Query 44319 GTAAGA--CAATTACAGATATTGTTGTAGAGGCAGTAAAGATAGAACAAGAATTTATGAC 44376 |||| | | ||||| | | || || || | || |||||||||||| |||| Sbjct 37358 CCAAGAACGCGTCAAGGATATCATCTTGGAAGCTGTCAGCATTGAACAAGAATTTTTGAC 37299 Query 44377 AACAGCATTACCTGTAAATTTAATAGGAATGAATGAACTTTTGATGAACCAATATATTGA 44436 || | || || | | || || |||||| |||||| ||||| ||||| Sbjct 37298 GGATGCTCTTCCCGTTGCTCTCATTGGCATGAATTCTGCCTTGATGTGTCAATACATTGA 37239 Query 44437 ATACATTGCAGATCGTTTACTTTTGGAACTGGGTTGCGATAAACACTATATTG-TACAAA 44495 || | |||| |||||| | | | | || || | ||| || || || | ||| | Sbjct 37238 ATTCGTTGCTGATCGTCTCATGGTTGCTCTTGGGTTCGACAAGATTTACATGGCTAC-TA 37180 Query 44496 ACCCGTTTGATTTTATGGAAAATATTTCGTTGGAAGGCAAAACAAACTTTTTTGAAAAAC 44555 | || ||||| |||||||| | || || | ||||||| || ||||| |||||||| | Sbjct 37179 ATCCATTTGACTTTATGGACATGATCTCTCTCCAAGGCAAGACCAACTTCTTTGAAAAGC 37120 Query 44556 GCGTTGGAGAATATCAGCGAATGGGCGTCATGATAACAAG 44595 | || || ||||| || || |||||| |||||| Sbjct 37119 GTGTCTCCGATTATCAACGTGCTGGTGTCATG--AACAAG 37082 >seq59 Length=120760 Score = 104 bits (114), Expect = 2e-17 Identities = 274/418 (66%), Gaps = 29/418 (7%) Strand=Plus/Minus Query 40862 TGAAGGTGATCTTGGTCCTGTTTATGGATTTCAGTCGCGACATTTTGGAGCAAAATATGA 40921 ||||||||| ||||| || ||||| |||||||| | | |||| ||||| || || || | Sbjct 8981 TGAAGGTGACCTTGGACCAGTTTACGGATTTCAATGGAGACACTTTGGCGCCAAGTACGT 8922 Query 40922 C-ACTATGTACTCTGATTATACCAATAAAGGAATGGATCAATTACAGTGCGTTATAGATA 40980 ||| || || |||||||||| |||| | ||||||||||| || || |||| Sbjct 8921 TGACTGTG-ACACTGATTATACAGGACAAGGCGTTGATCAATTACAACAAGTGATTGATA 8863 Query 40981 CGATTAAATCCGATCCC---GATAGCCGACGTATAATATTGTGCGCGTGGAACCCAACGG 41037 | || ||| | ||||| ||| || || || || | | || |||||||| | | Sbjct 8862 CTATAAAAAACAATCCCACTGATCGCAGA---ATCATTCTATCAGCATGGAACCCTGCAG 8806 Query 41038 ACGTACATTTGATGGCATTGCCACCTTGTCATTTGTTATGTCAGTTTTACGTTTGCA--- 41094 | | | | | ||||| || |||||||||||| || ||||||||||| || | | Sbjct 8805 ATATTCCTATCATGGCTTTACCACCTTGTCATGCCTTTTGTCAGTTTTATGTATCTAACC 8746 Query 41095 ---------ATGGTG---------AACTGTCATGTCAATTGTATCAAAGATCAGGTGACA 41136 |||| | | | || ||| | |||||| | || | || | Sbjct 8745 CACCTCAGGATGGCGGGCGTGCCAAGTTATCCTGTGTGCTCTATCAACGTTCTTGCGATA 8686 Query 41137 TGGGACTAGGGGTCCCGTTTAACATAGCGAGTTATGCTCTGCTCACGTATATGATTGCAC 41196 ||||||| || || || || || || || |||||| || | || |||||||||| Sbjct 8685 TGGGACTGGGTGTTCCTTTCAATATTGCTTCTTATGCACTTTTGACACGCATGATTGCAC 8626 Query 41197 ACGTTACCAATTTAAAACCTGGTGAATTTGTTCACACGTTAGGAGATGGACATATTTA 41254 | || || || | ||||||||||||| | || || | || ||| |||| |||| Sbjct 8625 ATGTAACAGATCTTGAACCTGGTGAATTCATACATACAATGGGCGATACACATGTTTA 8568 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397453287362800