Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhizopus_20microsporus_20var._20microsporus_20[genbank_20GCA_5F00208
3745.1_202017-04-12] 560 sequences; 24,950,816 total letters
Query= NC_028091.1
Length=196300
Score E
Sequences producing significant alignments: (Bits) Value
seq70 304 2e-77
seq251 98.7 1e-15
seq36 86.0 8e-12
>seq70
Length=105670
Score = 304 bits (336), Expect = 2e-77
Identities = 1121/1732 (65%), Gaps = 42/1732 (2%)
Strand=Plus/Plus
Query 110363 CGGAGATAGTACATCCCGGTCTTGAGTCCTTGTTTCCATGCGTACATATGCATAGAAGAG 110422
|| || || ||||| || ||||| | ||| | || ||| | || | |||||| | |
Sbjct 2995 CGAAGGTAATACATGCCTGTCTTTAATCCCTTTTGCCAGCCATAAAAGTGCATACTGGTG 3054
Query 110423 AGCTTGGACATCGTTGGACTTT-CCATGAAGAGGTTCATACTTTGACTTTGGTCAATGAA 110481
||||| || ||||| | |||| |||| ||||| |||||||||||||||||| |
Sbjct 3055 AGCTTAC-CAAAGTTGGGTTCAGCCATAAAGATGTTCAAACTTTGACTTTGGTCAATATA 3113
Query 110482 GCGCCCC-CGTTGTGCCGCCATATCAATGACAT--CCTTCATCTTAATTTCCCAAACTGT 110538
||| || || | || ||||| ||||||| | | || | |||||||| || ||
Sbjct 3114 -CGCACCACGATCAGCAGCCATGTCAATGATAGTACGTTGAGAG--ATTTCCCAGACAGT 3170
Query 110539 GCGATAGAGATTCTTGATATCATCTGGGATATCTGAG-ATATTCTGGATGGAACCCCCC- 110596
||||||| || | | | ||||| ||| | | ||||| || || || ||
Sbjct 3171 CTTGTAGAGATCTTTCAAGTTTTGAGGGATG-CTGGGCACGTTCTGAATAGACCCTCCGT 3229
Query 110597 --GCCTTCACCATGAGATCCTTCATATCCTTGGACCAGAGACCAATCTTCTTGAGGTCAT 110654
||| | | |||| | ||||| ||| | | ||||||||| || | || |||
Sbjct 3230 CAGCCATGATCATG---TTCTTCACATCATCGTTCCAGAGACCCATATCGACCAGATCAC 3286
Query 110655 TGACGAGGTGCTTGTTGACAATGACAAACTCACCTGCGAGGGTTCTTCTCAGGTAGATGT 110714
|| | |||||| || | ||||||| ||| | | ||||| ||
Sbjct 3287 GGAGTAACCAAGGGTTGACCATTTGGTATTCACCTGAGAGCACACGACGGGTGTAGAAGT 3346
Query 110715 TTGTTGTGTATGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGAGGCTGTTG 110774
| | |||||| |||||||| |||||||| ||| | ||||| | |||||||| || |
Sbjct 3347 TGGATGTGTAAGGTTCAAAACATTCATTGAAACCGAGCATTTGAGAAGTGGAGGCAGTAG 3406
Query 110775 GCATTGGTGCCATCAAAAGACTGTTACGAAGACCCTTCTCCTTGATGCGTTCCTTGAGAA 110834
|||| || || | || ||| ||| || | ||| | || || |||||||||
Sbjct 3407 GCATAGGAGCAACCAGCAGAGAGTTGCGGACACCATGCTTAGCAATCTTTTCCTTGAGTG 3466
Query 110835 CATCCCAGTCGTAGTTGA-GCTTGGTTTCACCTTCCCACATGTCAAACTGAAGCACCCCT 110893
| ||||||| || | | | ||| | || |||| |||||||| | || || | ||
Sbjct 3467 CGGCCCAGTCCCAGAGGTTGGTAGGTGTGACATTCC-ACATGTCATATTGCAGGATACCC 3525
Query 110894 TGGGACGCGGGAGAACCCTCAAAGGTTTCATAGGAACCTTGGGCTTCAGCCAATTCACAG 110953
| |||| | || || ||| ||||||| || | || | ||||||||| || |||
Sbjct 3526 TTGGACACAGGGCTGCCTTCATAGGTTTCGTAAGGTCCATACTTTTCAGCCAACTCGCAG 3585
Query 110954 CTCGCCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATTCATCTCCTTGGCT 111013
|| ||||||| || || || |||||||||||||| || |||| || |||||||
Sbjct 3586 GAGGCTTCCAGGGCAGCATGGTAGATGGTTTCAAAGATTTGAATGTTCAACTGCTTGGCT 3645
Query 111014 TCATCTGAATCAAATGCGTAGCGGCACAAAATAAATACATCCGCGAGACCTTGAACACCC 111073
||| |||||| |||| || || || || || || | |||||||||||
Sbjct 3646 TCAGGTGAATCGAATGGATAACGAAGAGCCATGAAAGTGTCGGCTAAGCCTTGAACACCT 3705
Query 111074 AAACCAATAGGTCTGTGTCGCATATTAGA-CTTTCGCGCAGTCTCAACGGGATAAAAATT 111132
|||||||| |||||||||| | | || || |||||| || || ||||| ||||
Sbjct 3706 AAACCAATCGGTCTGTGTCTCTTGTTGGATCTTTCG-GCTTCGATGACAGGATAGTAATT 3764
Query 111133 TCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATTTCATGAAGTTTTTC 111192
| || |||| ||| | ||| | || | || ||| || | || || |||||||
Sbjct 3765 GATATCGATGATCTTGTTCAAGTTTCTAGTGATAACCTTGGTAACATCGTGCAGTTTTTG 3824
Query 111193 ATAATCAAAAGTGCGAGTCTCTTCATTGA---CATACTTTGGAAGGGCGATTGATGCCAA 111249
||||| | | ||||| ||||| |||| | || || || || || |||||
Sbjct 3825 GAAATCATACTTT----TCTCT--ATTGATCACATAGGTAGGCAGAGCAATGGAGGCCAA 3878
Query 111250 ATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTACATAAGTTGGA 111309
|| || ||||| ||||| | | ||| || | |||||||||||| | |||
Sbjct 3879 GTTACAGACAGCGACTTCATCAGGACTCGAGTATTCAACAATTTCTGTACACAGATTGCT 3938
Query 111310 ACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTCTTGTTGCACGCATCCTTGTAGAG 111369
| ||| ||||| ||||| || | || |||||||| |||| || |||||||| |||||
Sbjct 3939 GCACTTGATCGTACCCAAGTTTTGCTGATTACTCTTTCTGTTACAAGCATCCTTATAGAG 3998
Query 111370 CATGTAGGGCGTCCCCGTCTCCGTCTGTGATTTGAGAATAGCCTTCCA-AACATCGGCGG 111428
||| | || | || |||||||| || | || | ||| || | ||| | | | | |
Sbjct 3999 TATGAATGGATTGCCTGTCTCCGTTTGAGCTTCCAAAATGGCATACCACAGCTTTTGAGC 4058
Query 111429 CTGGTACAATGGCGTTGGCCCGTCCCTCCGCCTCGTACTTTGTGTAGAGGGCTTCAAACT 111488
|| | | | | | || | ||| || ||||| ||| ||||| || ||||||
Sbjct 4059 CTTG-ATCGTTTCTCTAGCTCTTCCTTCACGTTCGTATTTTTCATAGAGAGCAACAAACT 4117
Query 111489 CCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTCTGGACAGAAAAGAGACCATTGAC 111548
| |||||| || | || || |||| | ||||| || |||||||| | ||
Sbjct 4118 CGTCACCCCAGATTTCATGTAATCCAGGAGCCTCATTGGGACAAAACAGAGACCAATCAC 4177
Query 111549 CACCTTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGGATGAAAAGAGATCTC 111608
|||| || || |||| ||||||||| || |||||||| || | | || ||||| |
Sbjct 4178 CACCGTCTCTGACACGCTGCATGAAAAGATCAGGAATCCAGAGAGCATAGAACAGATCAC 4237
Query 111609 TACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAGGAACTCCATGATATCCG 111668
| || || || | || ||| ||| || || | || | || || |
Sbjct 4238 GAGCCCTGATTTCGTCTTTGCCAAAGTTTTTTCGCAAGTCTAAAAAGGTAAAAATGTCTG 4297
Query 111669 CGTGCCATGGCTCAAGATAGACTGCGATAGATCCCTTTCGACGC------CCAGCTTGAT 111722
| ||||| || || | || | ||||| | ||| ||||| ||| ||||||
Sbjct 4298 CATGCCAAGGTTCCAAGTACATTGCGAATGCGCCC---GGACGCTTATTACCACCTTGAT 4354
Query 111723 TTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGG-AATAATACCATCTGATTGA 111781
||||| || || || ||| || || || ||||| || || ||| || | || | |
Sbjct 4355 CGACATAACGAGCCGTATTGTTGAAAACACGTAGCATGGGCAACAAT-CCGTTGGAGTAA 4413
Query 111782 CCATTTGTCCCCCGAATACGAGATTTATTGGCTCTCACATCATGGATGTGCATCCCAATA 111841
|| || || || ||| ||| | | || | | | || |||| | ||||||
Sbjct 4414 CCGTTGGTGCCGGCAATGTATGATCCACTAGCACGAATGTTGTGAATGTTTAAGCCAATA 4473
Query 111842 CCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTCCATAGATACCGTTGATT 111901
|| || || ||| |||||||| ||||| | || || |||||||||| | |||
Sbjct 4474 CCGCCTGCTGTCTTGGAGATTTGAGCACAGATTTTGAGCGTCTCATAGATACCTTCGATC 4533
Query 111902 GAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGTCTTGGTGTACCAGCA 111961
|| || || || ||| || | ||||||| |||||||| || | ||||| || |||
Sbjct 4534 GAATCTTCTTTCATGGTGAGCAAGAAGCAAGAAGACATCTGGGGACGAGGTGTGCCTGCA 4593
Query 111962 TTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCTTGGGACATCTTGTCGTATGTCTCC 112021
|| || || || || | ||||| | || | || ||||||| || |||||||||
Sbjct 4594 TTAAATAGAGTAGGACTAGCGTGTGTAAAGTATCTTTCGGACATCAAGTTGTATGTCTCA 4653
Query 112022 AAGACAGAATCAATGTCTTCCCCGTGGATGCCGATTGCGACCCGCATGAACA 112073
| | | |||||| || || ||||| ||||| || || ||||||| ||
Sbjct 4654 ATAGCTGCATCAATATCGGTTCCATGGATACCGATCGCAACACGCATGATCA 4705
>seq251
Length=24034
Score = 98.7 bits (108), Expect = 1e-15
Identities = 235/350 (67%), Gaps = 19/350 (5%)
Strand=Plus/Minus
Query 182513 GATGAGACCCTTGATGTGAGAACCATCATTATCGGCATCTGTCATAATCATAAGACGACC 182572
||| |||||||| ||||| ||||| |||| ||| ||||||||| ||||| | ||| ||
Sbjct 13485 GATCAGACCCTTAATGTGTGAACCGTCATGATCTTGATCTGTCATGATCATCAAACGGCC 13426
Query 182573 ATAGCGAAGTTCAGAAACATCTTGGTAGTCTTTTCCTTGTTGAAGACCAAGGATCTTCTT 182632
||| || | ||| |||| || || | ||| || || ||||| ||||| || |||
Sbjct 13425 ATATCGCAACTCATCAACACTTTCATACTTTTTACCATGCTGAAGGCCAAGAATAGCCTT 13366
Query 182633 GAGATCATTGAACTCCTGGTTTGATGTAAGCTGTGCCACCGAAGCGTCCCGAACATTCTT 182692
|| | |||| || | ||| | || | || ||| |||| ||||| |||
Sbjct 13365 GATGTTTTTGATTTCTTCATTTTTCATGAGTTCAGCATTAGAAACGTCACGAACGTTCA- 13307
Query 182693 ACA-TTTACCGCGAAGTGGGAACACACCGTAGTGATCACGACCAACGACAGAGAGACC-C 182750
||| ||| || || | ||||| ||||| |||| |||||||| || || || | || |
Sbjct 13306 ACAGTTTGCCACGGATGGGGAATACACCATAGTAGTCACGACCCACTACTGACATGCCAC 13247
Query 182751 GCAACCGCGAGGGTTTTCGCCGAATCACCCTCCGTGACAATGAGAGTACA---------C 182801
||| | || | || || |||||||| || |||| || ||||| || |
Sbjct 13246 TCAAAA-CAAGCGACTTAGCTGAATCACCTTCTGTGATGATCAGAGTGCAGCGCTTGTTC 13188
Query 182802 TTTCCAGATTGTGCCGTACCCGCCTTGTTCGCGTCATCCAACTTGGGAAT 182851
||||||| | | ||| || ||| || || ||||||||||||||
Sbjct 13187 TTTCCAG---GAAC---ACCGGCAAAGTTTGCATCTTCCAACTTGGGAAT 13144
>seq36
Length=159061
Score = 86.0 bits (94), Expect = 8e-12
Identities = 109/150 (73%), Gaps = 0/150 (0%)
Strand=Plus/Minus
Query 170027 GCAAAGCATAACAGCGAACAAGATTGTTGGGTCATAATCAAGGACATTGTTTATGACCTC 170086
||||||||||||| | | || |||||||| | |||| | | || | || ||
Sbjct 41692 GCAAAGCATAACAAGCCAGATGACTGTTGGGTTGTTGTCAATGGCCAAGTCTTGGATGTC 41633
Query 170087 ACAAAATTCCTTCCAGATCACCCCGGTGGTAAGAAGGCGATCATGCTCTTTGCTGGCAAA 170146
||| | |||||||| ||||| || ||||| |||||||| ||| || ||| ||||||
Sbjct 41632 ACAGACTTCCTTCCTGATCATCCTGGTGGAAAGAAGGCTATCTTGATCTATGCTGGTCGT 41573
Query 170147 GATGCAACTGAAGAGTTTGATATGCTTCAT 170176
|||||||| |||||||| | ||| | |||
Sbjct 41572 GATGCAACAGAAGAGTTCAACATGATGCAT 41543
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 628027603776000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |