Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopus_20microsporus_20var._20microsporus_20[genbank_20GCA_5F00208 3745.1_202017-04-12] 560 sequences; 24,950,816 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq70 304 2e-77 seq251 98.7 1e-15 seq36 86.0 8e-12 >seq70 Length=105670 Score = 304 bits (336), Expect = 2e-77 Identities = 1121/1732 (65%), Gaps = 42/1732 (2%) Strand=Plus/Plus Query 110363 CGGAGATAGTACATCCCGGTCTTGAGTCCTTGTTTCCATGCGTACATATGCATAGAAGAG 110422 || || || ||||| || ||||| | ||| | || ||| | || | |||||| | | Sbjct 2995 CGAAGGTAATACATGCCTGTCTTTAATCCCTTTTGCCAGCCATAAAAGTGCATACTGGTG 3054 Query 110423 AGCTTGGACATCGTTGGACTTT-CCATGAAGAGGTTCATACTTTGACTTTGGTCAATGAA 110481 ||||| || ||||| | |||| |||| ||||| |||||||||||||||||| | Sbjct 3055 AGCTTAC-CAAAGTTGGGTTCAGCCATAAAGATGTTCAAACTTTGACTTTGGTCAATATA 3113 Query 110482 GCGCCCC-CGTTGTGCCGCCATATCAATGACAT--CCTTCATCTTAATTTCCCAAACTGT 110538 ||| || || | || ||||| ||||||| | | || | |||||||| || || Sbjct 3114 -CGCACCACGATCAGCAGCCATGTCAATGATAGTACGTTGAGAG--ATTTCCCAGACAGT 3170 Query 110539 GCGATAGAGATTCTTGATATCATCTGGGATATCTGAG-ATATTCTGGATGGAACCCCCC- 110596 ||||||| || | | | ||||| ||| | | ||||| || || || || Sbjct 3171 CTTGTAGAGATCTTTCAAGTTTTGAGGGATG-CTGGGCACGTTCTGAATAGACCCTCCGT 3229 Query 110597 --GCCTTCACCATGAGATCCTTCATATCCTTGGACCAGAGACCAATCTTCTTGAGGTCAT 110654 ||| | | |||| | ||||| ||| | | ||||||||| || | || ||| Sbjct 3230 CAGCCATGATCATG---TTCTTCACATCATCGTTCCAGAGACCCATATCGACCAGATCAC 3286 Query 110655 TGACGAGGTGCTTGTTGACAATGACAAACTCACCTGCGAGGGTTCTTCTCAGGTAGATGT 110714 || | |||||| || | ||||||| ||| | | ||||| || Sbjct 3287 GGAGTAACCAAGGGTTGACCATTTGGTATTCACCTGAGAGCACACGACGGGTGTAGAAGT 3346 Query 110715 TTGTTGTGTATGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGAGGCTGTTG 110774 | | |||||| |||||||| |||||||| ||| | ||||| | |||||||| || | Sbjct 3347 TGGATGTGTAAGGTTCAAAACATTCATTGAAACCGAGCATTTGAGAAGTGGAGGCAGTAG 3406 Query 110775 GCATTGGTGCCATCAAAAGACTGTTACGAAGACCCTTCTCCTTGATGCGTTCCTTGAGAA 110834 |||| || || | || ||| ||| || | ||| | || || ||||||||| Sbjct 3407 GCATAGGAGCAACCAGCAGAGAGTTGCGGACACCATGCTTAGCAATCTTTTCCTTGAGTG 3466 Query 110835 CATCCCAGTCGTAGTTGA-GCTTGGTTTCACCTTCCCACATGTCAAACTGAAGCACCCCT 110893 | ||||||| || | | | ||| | || |||| |||||||| | || || | || Sbjct 3467 CGGCCCAGTCCCAGAGGTTGGTAGGTGTGACATTCC-ACATGTCATATTGCAGGATACCC 3525 Query 110894 TGGGACGCGGGAGAACCCTCAAAGGTTTCATAGGAACCTTGGGCTTCAGCCAATTCACAG 110953 | |||| | || || ||| ||||||| || | || | ||||||||| || ||| Sbjct 3526 TTGGACACAGGGCTGCCTTCATAGGTTTCGTAAGGTCCATACTTTTCAGCCAACTCGCAG 3585 Query 110954 CTCGCCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATTCATCTCCTTGGCT 111013 || ||||||| || || || |||||||||||||| || |||| || ||||||| Sbjct 3586 GAGGCTTCCAGGGCAGCATGGTAGATGGTTTCAAAGATTTGAATGTTCAACTGCTTGGCT 3645 Query 111014 TCATCTGAATCAAATGCGTAGCGGCACAAAATAAATACATCCGCGAGACCTTGAACACCC 111073 ||| |||||| |||| || || || || || || | ||||||||||| Sbjct 3646 TCAGGTGAATCGAATGGATAACGAAGAGCCATGAAAGTGTCGGCTAAGCCTTGAACACCT 3705 Query 111074 AAACCAATAGGTCTGTGTCGCATATTAGA-CTTTCGCGCAGTCTCAACGGGATAAAAATT 111132 |||||||| |||||||||| | | || || |||||| || || ||||| |||| Sbjct 3706 AAACCAATCGGTCTGTGTCTCTTGTTGGATCTTTCG-GCTTCGATGACAGGATAGTAATT 3764 Query 111133 TCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATTTCATGAAGTTTTTC 111192 | || |||| ||| | ||| | || | || ||| || | || || ||||||| Sbjct 3765 GATATCGATGATCTTGTTCAAGTTTCTAGTGATAACCTTGGTAACATCGTGCAGTTTTTG 3824 Query 111193 ATAATCAAAAGTGCGAGTCTCTTCATTGA---CATACTTTGGAAGGGCGATTGATGCCAA 111249 ||||| | | ||||| ||||| |||| | || || || || || ||||| Sbjct 3825 GAAATCATACTTT----TCTCT--ATTGATCACATAGGTAGGCAGAGCAATGGAGGCCAA 3878 Query 111250 ATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTACATAAGTTGGA 111309 || || ||||| ||||| | | ||| || | |||||||||||| | ||| Sbjct 3879 GTTACAGACAGCGACTTCATCAGGACTCGAGTATTCAACAATTTCTGTACACAGATTGCT 3938 Query 111310 ACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTCTTGTTGCACGCATCCTTGTAGAG 111369 | ||| ||||| ||||| || | || |||||||| |||| || |||||||| ||||| Sbjct 3939 GCACTTGATCGTACCCAAGTTTTGCTGATTACTCTTTCTGTTACAAGCATCCTTATAGAG 3998 Query 111370 CATGTAGGGCGTCCCCGTCTCCGTCTGTGATTTGAGAATAGCCTTCCA-AACATCGGCGG 111428 ||| | || | || |||||||| || | || | ||| || | ||| | | | | | Sbjct 3999 TATGAATGGATTGCCTGTCTCCGTTTGAGCTTCCAAAATGGCATACCACAGCTTTTGAGC 4058 Query 111429 CTGGTACAATGGCGTTGGCCCGTCCCTCCGCCTCGTACTTTGTGTAGAGGGCTTCAAACT 111488 || | | | | | || | ||| || ||||| ||| ||||| || |||||| Sbjct 4059 CTTG-ATCGTTTCTCTAGCTCTTCCTTCACGTTCGTATTTTTCATAGAGAGCAACAAACT 4117 Query 111489 CCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTCTGGACAGAAAAGAGACCATTGAC 111548 | |||||| || | || || |||| | ||||| || |||||||| | || Sbjct 4118 CGTCACCCCAGATTTCATGTAATCCAGGAGCCTCATTGGGACAAAACAGAGACCAATCAC 4177 Query 111549 CACCTTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGGATGAAAAGAGATCTC 111608 |||| || || |||| ||||||||| || |||||||| || | | || ||||| | Sbjct 4178 CACCGTCTCTGACACGCTGCATGAAAAGATCAGGAATCCAGAGAGCATAGAACAGATCAC 4237 Query 111609 TACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAGGAACTCCATGATATCCG 111668 | || || || | || ||| ||| || || | || | || || | Sbjct 4238 GAGCCCTGATTTCGTCTTTGCCAAAGTTTTTTCGCAAGTCTAAAAAGGTAAAAATGTCTG 4297 Query 111669 CGTGCCATGGCTCAAGATAGACTGCGATAGATCCCTTTCGACGC------CCAGCTTGAT 111722 | ||||| || || | || | ||||| | ||| ||||| ||| |||||| Sbjct 4298 CATGCCAAGGTTCCAAGTACATTGCGAATGCGCCC---GGACGCTTATTACCACCTTGAT 4354 Query 111723 TTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGG-AATAATACCATCTGATTGA 111781 ||||| || || || ||| || || || ||||| || || ||| || | || | | Sbjct 4355 CGACATAACGAGCCGTATTGTTGAAAACACGTAGCATGGGCAACAAT-CCGTTGGAGTAA 4413 Query 111782 CCATTTGTCCCCCGAATACGAGATTTATTGGCTCTCACATCATGGATGTGCATCCCAATA 111841 || || || || ||| ||| | | || | | | || |||| | |||||| Sbjct 4414 CCGTTGGTGCCGGCAATGTATGATCCACTAGCACGAATGTTGTGAATGTTTAAGCCAATA 4473 Query 111842 CCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTCCATAGATACCGTTGATT 111901 || || || ||| |||||||| ||||| | || || |||||||||| | ||| Sbjct 4474 CCGCCTGCTGTCTTGGAGATTTGAGCACAGATTTTGAGCGTCTCATAGATACCTTCGATC 4533 Query 111902 GAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGTCTTGGTGTACCAGCA 111961 || || || || ||| || | ||||||| |||||||| || | ||||| || ||| Sbjct 4534 GAATCTTCTTTCATGGTGAGCAAGAAGCAAGAAGACATCTGGGGACGAGGTGTGCCTGCA 4593 Query 111962 TTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCTTGGGACATCTTGTCGTATGTCTCC 112021 || || || || || | ||||| | || | || ||||||| || ||||||||| Sbjct 4594 TTAAATAGAGTAGGACTAGCGTGTGTAAAGTATCTTTCGGACATCAAGTTGTATGTCTCA 4653 Query 112022 AAGACAGAATCAATGTCTTCCCCGTGGATGCCGATTGCGACCCGCATGAACA 112073 | | | |||||| || || ||||| ||||| || || ||||||| || Sbjct 4654 ATAGCTGCATCAATATCGGTTCCATGGATACCGATCGCAACACGCATGATCA 4705 >seq251 Length=24034 Score = 98.7 bits (108), Expect = 1e-15 Identities = 235/350 (67%), Gaps = 19/350 (5%) Strand=Plus/Minus Query 182513 GATGAGACCCTTGATGTGAGAACCATCATTATCGGCATCTGTCATAATCATAAGACGACC 182572 ||| |||||||| ||||| ||||| |||| ||| ||||||||| ||||| | ||| || Sbjct 13485 GATCAGACCCTTAATGTGTGAACCGTCATGATCTTGATCTGTCATGATCATCAAACGGCC 13426 Query 182573 ATAGCGAAGTTCAGAAACATCTTGGTAGTCTTTTCCTTGTTGAAGACCAAGGATCTTCTT 182632 ||| || | ||| |||| || || | ||| || || ||||| ||||| || ||| Sbjct 13425 ATATCGCAACTCATCAACACTTTCATACTTTTTACCATGCTGAAGGCCAAGAATAGCCTT 13366 Query 182633 GAGATCATTGAACTCCTGGTTTGATGTAAGCTGTGCCACCGAAGCGTCCCGAACATTCTT 182692 || | |||| || | ||| | || | || ||| |||| ||||| ||| Sbjct 13365 GATGTTTTTGATTTCTTCATTTTTCATGAGTTCAGCATTAGAAACGTCACGAACGTTCA- 13307 Query 182693 ACA-TTTACCGCGAAGTGGGAACACACCGTAGTGATCACGACCAACGACAGAGAGACC-C 182750 ||| ||| || || | ||||| ||||| |||| |||||||| || || || | || | Sbjct 13306 ACAGTTTGCCACGGATGGGGAATACACCATAGTAGTCACGACCCACTACTGACATGCCAC 13247 Query 182751 GCAACCGCGAGGGTTTTCGCCGAATCACCCTCCGTGACAATGAGAGTACA---------C 182801 ||| | || | || || |||||||| || |||| || ||||| || | Sbjct 13246 TCAAAA-CAAGCGACTTAGCTGAATCACCTTCTGTGATGATCAGAGTGCAGCGCTTGTTC 13188 Query 182802 TTTCCAGATTGTGCCGTACCCGCCTTGTTCGCGTCATCCAACTTGGGAAT 182851 ||||||| | | ||| || ||| || || |||||||||||||| Sbjct 13187 TTTCCAG---GAAC---ACCGGCAAAGTTTGCATCTTCCAACTTGGGAAT 13144 >seq36 Length=159061 Score = 86.0 bits (94), Expect = 8e-12 Identities = 109/150 (73%), Gaps = 0/150 (0%) Strand=Plus/Minus Query 170027 GCAAAGCATAACAGCGAACAAGATTGTTGGGTCATAATCAAGGACATTGTTTATGACCTC 170086 ||||||||||||| | | || |||||||| | |||| | | || | || || Sbjct 41692 GCAAAGCATAACAAGCCAGATGACTGTTGGGTTGTTGTCAATGGCCAAGTCTTGGATGTC 41633 Query 170087 ACAAAATTCCTTCCAGATCACCCCGGTGGTAAGAAGGCGATCATGCTCTTTGCTGGCAAA 170146 ||| | |||||||| ||||| || ||||| |||||||| ||| || ||| |||||| Sbjct 41632 ACAGACTTCCTTCCTGATCATCCTGGTGGAAAGAAGGCTATCTTGATCTATGCTGGTCGT 41573 Query 170147 GATGCAACTGAAGAGTTTGATATGCTTCAT 170176 |||||||| |||||||| | ||| | ||| Sbjct 41572 GATGCAACAGAAGAGTTCAACATGATGCAT 41543 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628027603776000