Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopus_20microsporus_20var._20microsporus_20[genbank_20GCA_5F00208 3745.1_202017-04-12] 560 sequences; 24,950,816 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq70 221 1e-52 seq106 114 2e-20 seq53 105 8e-18 seq251 100 4e-16 seq60 87.8 2e-12 >seq70 Length=105670 Score = 221 bits (244), Expect = 1e-52 Identities = 879/1374 (64%), Gaps = 26/1374 (2%) Strand=Plus/Plus Query 118182 TAGATATTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAG 118241 |||| |||| ||||| || ||||| || |||||| ||| | ||||| | |||||| Sbjct 3340 TAGAAGTTGGATGTGTAAGGTTCAAAACATTCATTGAAACCGAGCATTTGAGAAGTGGAG 3399 Query 118242 GCTGTGGGCATGGGTGCCATGAGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGTTCC 118301 || || ||||| || || | || || ||| |||| ||| | | ||| |||| Sbjct 3400 GCAGTAGGCATAGGAGCAACCAGCAGAGAGTTGCGGACACCATGCTTAGCAATCTTTTCC 3459 Query 118302 TTGAGAGCGTCCCAGTCGTAG---TTG--AGCTTTGTCTCCCCCTGCCACATATCAAACT 118356 ||||| ||| ||||||| || ||| || | || | | |||||| ||| | | Sbjct 3460 TTGAGTGCGGCCCAGTCCCAGAGGTTGGTAGGTGTGACA-----TTCCACATGTCATATT 3514 Query 118357 GGAGGATACCTTGGGACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCG 118416 | |||||||| | |||| | || || ||| | || || || || || | || | Sbjct 3515 GCAGGATACCCTTGGACACAGGGCTGCCTTCATAGGTTTCGTAAGGTCCATACTTTTCAG 3574 Query 118417 CCAATTCGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTTTCAAAAATGCGAGCATTCA 118476 |||| ||| || || || ||||| || || || || |||||||| || || |||| Sbjct 3575 CCAACTCGCAGGAGGCTTCCAGGGCAGCATGGTAGATGGTTTCAAAGATTTGAATGTTCA 3634 Query 118477 TTGCCTTGGCCTCGTCGGAATCAAACGCGAGTCGGCACAAA-ATAAATACATCCGCGAGA 118535 |||||| || ||||| || | || | | | || || || || | Sbjct 3635 ACTGCTTGGCTTCAGGTGAATCGAATG-GATAACGAAGAGCCATGAAAGTGTCGGCTAAG 3693 Query 118536 CCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGA-CTTCCGAGCGGTCTCCAC 118594 ||||| ||||| | ||||| || | |||||| | || || ||| || || || Sbjct 3694 CCTTGAACACCTAAACCAATCGGTCTGTGTCTCTTGTTGGATCTTTCG-GCTTCGATGAC 3752 Query 118595 GGGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTC 118654 ||||| |||| ||||||| | | | || | ||| | |||| |||||| || | || Sbjct 3753 AGGATAGTAATTGATATCGATGATCTTGTTCAAGTTTCTAGTGATAACCTTGGTAACATC 3812 Query 118655 ATGAAGCTTTTCGTAATCAAAACTGCGAGTCTCTTCATTGA---CATACTTAGGAAGGGC 118711 || || |||| | ||||| | | ||||| ||||| |||| |||| || || Sbjct 3813 GTGCAGTTTTTGGAAATCATACTTT----TCTCT--ATTGATCACATAGGTAGGCAGAGC 3866 Query 118712 GATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGT 118771 || || |||| ||||| |||| | ||||| | | ||| || | |||||| || Sbjct 3867 AATGGAGGCCAAGTTACAGACAGCGACTTCATCAGGACTCGAGTATTCAACAATTTCTGT 3926 Query 118772 GCACAAGTTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGC 118831 |||| || | ||| || || |||||||| | ||||| |||| ||||||| || Sbjct 3927 ACACAGATTGCTGCACTTGATCGTACCCAAGTTTTGCTGATTACTCTTTCTGTTACAAGC 3986 Query 118832 ATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCA 118891 |||||| || || ||| |||| | || ||||||||||| | | | ||| || | ||| Sbjct 3987 ATCCTTATAGAGTATGAATGGATTGCCTGTCTCCGTTTGAGCTTCCAAAATGGCATACCA 4046 Query 118892 GACATCGGCAGCTGGCACAGTGGCGTTGGCTCGCCCCTCTTCCTCGTACTTTGTGTAGAG 118951 | | ||| | || | | |||| || || ||||| ||| ||||| Sbjct 4047 CAGCTTTTGAGCCTTGATCGTTTCTCTAGCTCTTCCTTCACGTTCGTATTTTTCATAGAG 4106 Query 118952 GGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCCCTGGTGCCTTATCTGGGCAGAAGAG 119011 || ||||||| |||||| | || | || || |||| || || || || || Sbjct 4107 AGCAACAAACTCGTCACCCCAGATTTCATGTAATCCAGGAGCCTCATTGGGACAAAACAG 4166 Query 119012 AGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAGCGCCGA 119071 |||||| | |||||| || || |||| |||||| || || || |||||||| || | Sbjct 4167 AGACCAATCACCACCGTCTCTGACACGCTGCATGAAAAGATCAGGAATCCAGAGAGCATA 4226 Query 119072 GAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAAGTC 119131 ||| ||||| ||| | ||| || | || || ||||| || |||||| Sbjct 4227 GAACAGATCACGAGCCCTGATTTCGTCTTTGCCAAAGTTTTTTCGCAAGTCTAAAAAGGT 4286 Query 119132 CATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCCCTTACG---ACGACC 119188 | || || || ||||| ||||||| ||||| |||| || ||| ||| | ||| Sbjct 4287 AAAAATGTCTGCATGCCAAGGTTCCAAGTACATTGCGAATGCGCCCGGACGCTTATTACC 4346 Query 119189 AGCCTGGTTTACATACCTCGCAGTGGCGTTAAATACACGAAGCATTGGAATGATACCATC 119248 | | || | ||||| | || || ||| || ||||| ||||| || | | || | Sbjct 4347 ACCTTGATCGACATAACGAGCCGTATTGTTGAAAACACGTAGCATGGGCAACAATCCGTT 4406 Query 119249 GGATTGGCCATTTGTCCCCCGAATACGAGACTTATTGGCTCTGACATCGTGGATGTGCAT 119308 ||| | || || || || ||| || | | || | | | ||| |||| | Sbjct 4407 GGAGTAACCGTTGGTGCCGGCAATGTATGATCCACTAGCACGAATGTTGTGAATGTTTAA 4466 Query 119309 ACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGACTGCCGTAGATCCC 119368 |||||||| ||||| ||| |||||||| || || |||| | | ||||| || Sbjct 4467 GCCAATACCGCCTGCTGTCTTGGAGATTTGAGCACAGATTTTGAGCGTCTCATAGATACC 4526 Query 119369 ATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTGAGGCCTGGGTGT 119428 |||||||| || | || | | || | |||||| ||||| || || | ||||| Sbjct 4527 TTCGATCGAATCTTCTTTCATGGTGAGCAAGAAGCAAGAAGACATCTGGGGACGAGGTGT 4586 Query 119429 ACCAGCGTTGAAGAGAGTTGGTGTCGCGTGGATGAACATACCTTGGGACATCTTGTCGTA 119488 || || || || ||||| || | ||||| | || | || ||||||| || ||| Sbjct 4587 GCCTGCATTAAATAGAGTAGGACTAGCGTGTGTAAAGTATCTTTCGGACATCAAGTTGTA 4646 Query 119489 GGTCTCCAAGACGGCGGGAATGTCTTCCCCGTGAATACCGATCGAGACCCGCAT 119542 ||||| | | || ||| || || || |||||||||| || ||||| Sbjct 4647 TGTCTCAATAGCTGCATCAATATCGGTTCCATGGATACCGATCGCAACACGCAT 4700 >seq106 Length=79482 Score = 114 bits (126), Expect = 2e-20 Identities = 184/262 (70%), Gaps = 7/262 (3%) Strand=Plus/Plus Query 130028 TGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAGACCC 130087 || ||||| || ||||| |||| | |||||| ||| || ||| ||||| | ||| Sbjct 37407 TGAAGACCTTCATCACGACAGATCAATTCATTGCTGAATGTCAAACCGGGCATCAAACCA 37466 Query 130088 CGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCACACAC 130147 || ||||| | ||| || || | | ||| || |||||||||||||| || || ||| Sbjct 37467 CGTTTCTTGAGCCAAAAGATGGAAGCAAAGGAACCAGAGAAGAAGATACCTTCGACAGCA 37526 Query 130148 GCGAACGCAAAGAGACGCTCAGCAAAGGAGCGGGACTTTGTATCAAACCACTTCATCGCC 130207 || || |||| || |||||||||||||| | | |||| || |||||| | ||| Sbjct 37527 GCAAAGGCAACAAGGCGCTCAGCAAAGGAACCG---TTTGAGGAAATCCACTTGAAGGCC 37583 Query 130208 CACTGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGCTTCAAAGAGTTCCTTCTTT 130267 || | |||||| ||| |||||| |||| || | || || |||||| | || || Sbjct 37584 CAATCAGCCTTTCTCTTGATACAAGGGATAGTGTCAATAGCAGAAAAGAG--CATTTCTT 37641 Query 130268 TCTGATGG--ATCTTTGATGTA 130287 ||| ||| ||||||||| || Sbjct 37642 TCTCTTGGTTATCTTTGATATA 37663 >seq53 Length=125223 Score = 105 bits (116), Expect = 8e-18 Identities = 307/464 (66%), Gaps = 24/464 (5%) Strand=Plus/Minus Query 117843 TAGTACATCCCCGTCTTGAGCCCCTGCTTCCAGGCATACATATGCATTGAGGACAACTTG 117902 |||||||| || ||||| || |||| |||||||||||| | ||||| || | ||| ||| Sbjct 93109 TAGTACATGCCAGTCTTTAGTCCCTTCTTCCAGGCATAAAAGTGCATAGAAGTCAATTTG 93050 Query 117903 GAGAGGGTTGGACTTTC--CA-TGAAGAGGTTCATACTTTGGGATTGATCGATGAAGCGT 117959 | | |||| ||| || | || | |||||| ||| |||||||| || ||| | Sbjct 93049 CCAAAGTTTGG---TTCGGCAGTAAATAAATTCATAGATTGAGATTGATCAATAAAGGCT 92993 Query 117960 CCCCGATCCGCCGCCATATCAATCACATCCTTCATCTTG--ATTTCCCACACAGTCCTGT 118017 || | ||| || ||||| ||||| || ||| | || || |||||||| ||| ||| Sbjct 92992 CCTCTATCAGCGGCCATGTCAAT--AATAGTTCTTTGTGAAATCTCCCACACGGTCTTGT 92935 Query 118018 AGAGGTTCTTAATATCATCTGGGATATCCACGATATTTTGGATGGATCCACCCGCCTT-- 118075 | || || || | |||||| || || ||| || | | ||||| | ||||| | Sbjct 92934 ATAGTTTTTTGAGATCATCAGGAAT-GCCAGGA---ATACGCTGGATACTACCGCCATGA 92879 Query 118076 --GACCATGAGATCCTTCA---TATCCTTTGACCAGAGACCAATCTTTTTGAGATCCTCC 118130 || ||| | | ||| | |||| || ||| | | | | | ||||||| | | Sbjct 92878 GCGATCATCATGTTCTTGATGTTATCATT---CCATAAATCGAGTTCAATGAGATCATTC 92822 Query 118131 ACGAGATGCTTATTGACAACAACAAACTCACCCGCGAGGGTGCGTCTCAGATAGATATTG 118190 | | ||||| ||||| | || ||||| | || | | ||| |||||| Sbjct 92821 AATAAATGCTGGTTGACTATTTGGAATTCACCGCTTTGAACACGACGCGTATAAATATTG 92762 Query 118191 GTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAGGCTGTGGGC 118250 | ||||| ||||| ||||| || || |||||||| ||||| ||| || || ||| Sbjct 92761 CTAGTGTAAGGCTCGAAGCATTCGTTATTACCCAATATTTGACTAGTGCTAGCAGTAGGC 92702 Query 118251 ATGGGTGCCATGAGAAGGCTGTTACGGAGACCCTTTTCCCTAAT 118294 || || || | ||||| |||||||| ||| | || ||| || Sbjct 92701 ATAGGAGCAACAAGAAGAGAGTTACGGACACCATATTTCCTGAT 92658 >seq251 Length=24034 Score = 100 bits (110), Expect = 4e-16 Identities = 200/294 (68%), Gaps = 2/294 (1%) Strand=Plus/Minus Query 179767 TTGAGGATGAGACCCTTAATGTGTGAACCATCGTTATCCGCATCCGTCATAATCATAAGC 179826 |||| ||| |||||||||||||||||||| || | ||| ||| ||||| ||||| | Sbjct 13490 TTGATGATCAGACCCTTAATGTGTGAACCGTCATGATCTTGATCTGTCATGATCATCAAA 13431 Query 179827 CGACCATAGCGAAGCTCGGAAACATCTTGATAATCCTTACCTTGTTGAAGACCCAAGATC 179886 || ||||| || | ||| |||| || ||| | ||||| || ||||| || | || Sbjct 13430 CGGCCATATCGCAACTCATCAACACTTTCATACTTTTTACCATGCTGAAGGCCAAGAATA 13371 Query 179887 TTCTTGAGATCATTGAACTCTTGGTTTGATGTGAGTTGCGCCACTGAAGCATCTCGGACA 179946 ||||| | |||| |||| ||| |||||| || ||| | || || || Sbjct 13370 GCCTTGATGTTTTTGATTTCTTCATTTTTCATGAGTTCAGCATTAGAAACGTCACGAAC- 13312 Query 179947 TTTTTACA-CTTCCCACGGAGAGGGAACACACCGTAGTGATCACGACCAACCACAGAGAG 180005 || ||| || ||||||| ||||| ||||| |||| |||||||| || || || | Sbjct 13311 GTTCAACAGTTTGCCACGGATGGGGAATACACCATAGTAGTCACGACCCACTACTGACAT 13252 Query 180006 ACCAGCAACTGCGAGGGTCTTCGCGGAATCACCCTCCGTCACGATGAGCGTACA 180059 ||| | | || | ||| || |||||||| || || | ||| || || || Sbjct 13251 GCCACTCAAAACAAGCGACTTAGCTGAATCACCTTCTGTGATGATCAGAGTGCA 13198 >seq60 Length=120286 Score = 87.8 bits (96), Expect = 2e-12 Identities = 262/399 (66%), Gaps = 8/399 (2%) Strand=Plus/Minus Query 11802 TATCAAGCATCTTCCTCGGAGATGTTTGGTAAAGTTAGGGAATCCCCACAAAATGAGGAG 11861 |||||||| ||| |||| || | | ||||||||| ||| | || ||||| || Sbjct 116541 TATCAAGCTTCTACCTCTGAACTCTATGGTAAAGTAGTTGAAACACCCCAAAAGGAAACA 116482 Query 11862 ACGCCCTTCTATCCACGATCCGTCTATGGCGTCTC-AAAGGTTGCGGCACATTGGCTCGT 11920 || ||||||||||| || ||| ||||| || | ||| || ||| ||||| | Sbjct 116481 ACACCCTTCTATCCCCGTTCCCCTTATGGTGTAGCCAAACTTTATGGCT-ATTGGATTAC 116423 Query 11921 GAAGAATTACCGAGAATCCTATGGTCTCTTTGCGTGCTCTGGTATTCTCTTCAACCACGA 11980 | || ||||| ||||| || | ||||| || |||||||||||||||||| || Sbjct 116422 GGTCAACTACCGTGAATCATACAACATGTTTGCCTGTAATGGTATTCTCTTCAACCATGA 116363 Query 11981 GTCACCCCGTCGTGGCCCGGATTTCGTGACAAAGAAGATCACCGATG--GTATCAAACA- 12037 ||||| |||||||| | |||||| || ||||| || || || | ||| Sbjct 116362 ATCACCTCGTCGTGGTCGTACTTTCGTTACCCGAAAGATTACTCGTGCTGTTGCGGACAT 116303 Query 12038 AATCGTGGCGGGTGAGAGGGAGTTCATTGAATTGGGGAACCTCAACGCCGAGAGGGACTG 12097 | ||| || | |||| | || | | || || | | || || | || || Sbjct 116302 CCACTTGGGACGTCA---AGAGTGCCTTTATCTCGGTAATATTGATGCTAAGCGTGATTG 116246 Query 12098 GGGACATGCCAAGGACTATGTTGAAGCCATGTGGCTCGTACTTCAACAAGAAGAGGCGGA 12157 ||||||||| || ||||| |||| ||||||||| | || || ||||| || | | Sbjct 116245 GGGACATGCTCGTGATTATGTCGAAGGTATGTGGCTCATGCTGCAGCAAGATCAGCCTCA 116186 Query 12158 CGAATATGTCGTCGCGACGGGGGAGACACACTCCGTCAG 12196 || | ||| | || || || || |||||| | ||||| Sbjct 116185 AGATTTCGTCTTGGCTACTGGTGAAACACACACAGTCAG 116147 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618430870953600