Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopus_20microsporus_20var._20microsporus_20[genbank_20GCA_5F00208 3745.1_202017-04-12] 560 sequences; 24,950,816 total letters Query= NC_028108.1 Length=171454 Score E Sequences producing significant alignments: (Bits) Value seq70 123 3e-23 >seq70 Length=105670 Score = 123 bits (136), Expect = 3e-23 Identities = 249/365 (68%), Gaps = 6/365 (2%) Strand=Plus/Plus Query 79477 ATGTCGGCGTGCCACGGCTCCAGATAGATGGCGAACGAACCCTTGCGCTTGCCGCCGCCC 79536 ||||| || ||||| || |||| || || ||||| | ||| ||||| || || Sbjct 4291 ATGTCTGCATGCCAAGGTTCCAAGTACATTGCGAATGCGCCCGGACGCTTATTACCACCT 4350 Query 79537 TGGTTGACGTACCGGGCCGTGTTGTTGAAAACTCGGAGCATGGGCACGATGCCGTCGGCG 79596 || | ||| || || ||||| ||||||||||| || |||||||||| | |||| || | Sbjct 4351 TGATCGACATAACGAGCCGTATTGTTGAAAACACGTAGCATGGGCAACAATCCGTTGGAG 4410 Query 79597 ACGCCGTTCGTCCCGTTGATTCGTGTACCGCTCGCCCGAATGTTCGAGCA-GTGGATTCC 79655 ||||| || ||| || || || || || |||||||| | | | || | || Sbjct 4411 TAACCGTTGGTGCCGGCAATGTATGATCCACTAGCACGAATGTT-GTGAATGTTTAAGCC 4469 Query 79656 GATGCCCCCGGACCACTTGGAGATGTGCGCGCACTCCTTGAGCGTCTCGTAGATGCCCTC 79715 || || || | ||||||||| || || || ||||||||||| ||||| || || Sbjct 4470 AATACCGCCTGCTGTCTTGGAGATTTGAGCACAGATTTTGAGCGTCTCATAGATACCTTC 4529 Query 79716 GATCGAGTCGTCCTTCATAGCGACCAGGAAGCAGCTCGACATCTGTGG--GTTGTTCGTA 79773 |||||| || || ||||| | || || |||||| |||||||| || | || || Sbjct 4530 GATCGAATCTTCTTTCATGGTGAGCAAGAAGCAAGAAGACATCTGGGGACGAGGT--GTG 4587 Query 79774 CCGGCGTTGAAGAGGGTCGGCGTCGCGTGCGTGAAGAACTTTTGGCTCATCAGATCGTAC 79833 || || || || || || || | ||||| || ||| | ||| | ||||| | ||| Sbjct 4588 CCTGCATTAAATAGAGTAGGACTAGCGTGTGTAAAGTATCTTTCGGACATCAAGTTGTAT 4647 Query 79834 GTCTC 79838 ||||| Sbjct 4648 GTCTC 4652 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 548520960326400