Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopus_20microsporus_20var._20microsporus_20[genbank_20GCA_5F00208 3745.1_202017-04-12] 560 sequences; 24,950,816 total letters Query= NC_028491.1 Length=98392 Score E Sequences producing significant alignments: (Bits) Value seq109 98.7 6e-16 seq165 93.3 3e-14 seq91 89.7 3e-13 >seq109 Length=78937 Score = 98.7 bits (108), Expect = 6e-16 Identities = 107/142 (75%), Gaps = 0/142 (0%) Strand=Plus/Plus Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGC 34548 ||||| | ||||| || ||||| ||||||||||||||||| || || || || Sbjct 18303 AGACGAAGGACCAAGTGAAGAGTAGATTCCTTTTGAATGTTATAGTCGCTTAGGGTACGA 18362 Query 34549 TCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCC 34608 | ||||| ||||||||||| ||||| || | ||| ||||| || || || | || ||| Sbjct 18363 CCATCTTCGAGTTGTTTACCAGCAAAGATGAGACGTTGTTGATCAGGAGGAATACCTTCC 18422 Query 34609 TTGTCTGTGATCTTTTGTTTTA 34630 |||||| ||||||||||||| Sbjct 18423 TTGTCTTGAATCTTTTGTTTTA 18444 >seq165 Length=49949 Score = 93.3 bits (102), Expect = 3e-14 Identities = 110/149 (74%), Gaps = 0/149 (0%) Strand=Plus/Plus Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539 || || | |||||| | || || |||||||| |||||||| ||||| || || Sbjct 37828 CCACCACGAAGACGGAGAACTAAGTGGAGAGTAGATTCCTTTTGGATGTTGTAGTCGCTC 37887 Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599 | || || ||||||| ||||||||||||||||| || | ||| |||||||| || || Sbjct 37888 AAGGTACGACCGTCTTCGAGTTGTTTACCGGCAAAGATAAGACGTTGTTGGTCAGGAGGA 37947 Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTT 34628 | || ||||||||| |||||||| || Sbjct 37948 ATACCTTCCTTGTCTTGAATCTTTTGCTT 37976 >seq91 Length=92626 Score = 89.7 bits (98), Expect = 3e-13 Identities = 109/149 (73%), Gaps = 0/149 (0%) Strand=Plus/Plus Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539 || || | |||||| | ||||| || || || |||||||||||||| ||||| Sbjct 69962 CCACCACGAAGACGGAGAACCAAGTGAAGGGTAGATTCCTTTTGAATGTTGTAATCACTC 70021 Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599 | || || ||||||| |||||||||||||| || || | ||| ||||| || || || Sbjct 70022 AAGGTACGACCGTCTTCGAGTTGTTTACCGGCGAAAATGAGACGTTGTTGATCAGGAGGG 70081 Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTT 34628 | || ||||| ||| ||||||||| || Sbjct 70082 ATACCTTCCTTATCTTGGATCTTTTGCTT 70110 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 314727451970480