Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopus_20microsporus_20var._20microsporus_20[genbank_20GCA_5F00208 3745.1_202017-04-12] 560 sequences; 24,950,816 total letters Query= NC_029255.1 Length=129563 Score E Sequences producing significant alignments: (Bits) Value seq59 109 5e-19 >seq59 Length=120760 Score = 109 bits (120), Expect = 5e-19 Identities = 181/259 (70%), Gaps = 12/259 (5%) Strand=Plus/Plus Query 118358 TGTAGTTTTCCAAAATAAAATCTTCAAACTTAAAGTCTTCTATATTTTTGATATCCTT-- 118415 ||||||| || || | ||||||||||||||| || || || ||| | || | ||| Sbjct 8437 TGTAGTTCTCTAATACAAAATCTTCAAACTTGAAATCATCGATAGT----ATCTACTTTA 8492 Query 118416 --GTTTATGGATAGTGTGGGAAACGGGAGAGGCTCCCTTGTGAGTTGGAGTTTCAGTGGC 118473 ||| || || || || || || || || | | | ||| | || |||| Sbjct 8493 CGGTTGATTTTTAAAGTAGGGAAAGGCTTGGGTTCACGTTGAACTTGTTGCTTGAGTGCG 8552 Query 118474 TCAATGTGATTCATATAGACATGAGCATCCCCAATTGTATGTATGAATTCACCAGGTGTA 118533 |||| |||| || ||| ||||| | ||| || |||||||||||||||||||||||| | Sbjct 8553 TCAAGATGATCCACATAAACATGTGTATCGCCCATTGTATGTATGAATTCACCAGGTTCA 8612 Query 118534 AGCCCTGTCAGGTGAGCAATCATGTATGTCAACAAACTG--TAGCTGGCTACATTAAAAG 118591 || |||| | || ||||||||| ||||| ||| || || || | ||| |||| Sbjct 8613 AGATCTGTTACATGTGCAATCATGCGTGTCA--AAAGTGCATAAGAAGCAATATTGAAAG 8670 Query 118592 GAACACCCAGACCCATGTC 118610 |||||||||| ||||| || Sbjct 8671 GAACACCCAGTCCCATATC 8689 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 414473971195840