Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopus_20microsporus_20var._20microsporus_20[genbank_20GCA_5F00208 3745.1_202017-04-12] 560 sequences; 24,950,816 total letters Query= NC_030656.1 Length=133492 Score E Sequences producing significant alignments: (Bits) Value seq106 230 2e-55 >seq106 Length=79482 Score = 230 bits (254), Expect = 2e-55 Identities = 560/838 (67%), Gaps = 14/838 (2%) Strand=Plus/Plus Query 4259 TTGGTATTCGGATACTCGCTTTTCGAAGAAATTAGTTTTGCCTTCTAACGAAATATTTTC 4318 ||| || ||||| || |||||||| ||||| || || ||||||| | || || | || Sbjct 37103 TTGATAATCGGAGACACGCTTTTCAAAGAAGTTGGTCTTGCCTTGGAGAGAGATCATGTC 37162 Query 4319 CATAAAATCAAACGGATTAGTTGCGTTGTAATGTTTTTCACACTTTAGAGCTACAAGCAA 4378 |||||| ||||| |||||||| || ||||| || || || ||||| || | | Sbjct 37163 CATAAAGTCAAATGGATTAGTAGCCATGTAAATCTTGTCGAACCCAAGAGCAACCATGAG 37222 Query 4379 TCGGTCAGCTACAAATTCTATATACTGGCTCATGAGTTCGCAGTTAATTCCAATTAATCT 4438 || ||||| || ||||| || || || | ||| | | | || || ||||| | Sbjct 37223 ACGATCAGCAACGAATTCAATGTATTGACACATCAAGGCAGAATTCATGCCAATGAGAGC 37282 Query 4439 CACAGGTAGCGCGTATGTCAAAAACTCTTGTTCTATAGTTACGGCTTCTGTGATTATATC 4498 || || || || | |||||||| |||||||| || | || ||||| ||| ||||| Sbjct 37283 AACGGGAAGAGCATCCGTCAAAAATTCTTGTTCAATGCTGACAGCTTCCAAGATGATATC 37342 Query 4499 TTTTATTTTATCTTTAGATGGTTTATTTACTAAG-TATCCAAACAATAAACACGCAAAAT 4557 || | |||| | | | |||| ||| | ||| || | ||| ||||| | Sbjct 37343 CTTGACGCGTTCTTG-GCTAGGACGCTTACGAAGGTGGGTAAATAAAAGACAAGCAAAGT 37401 Query 4558 CACAATGCAAACCTTCGTCTCTGCTAATCAGTTCGTTAGAAAACGTTAATCCGGGCATTA 4617 || ||| | |||||| || | | |||| ||| || || || || |||||||| | Sbjct 37402 CAGTATGAAGACCTTCATCACGACAGATCAATTCATTGCTGAATGTCAAACCGGGCATCA 37461 Query 4618 AACCTCTCTTTTTAAGCCAAAATATAGCGGCAAATGACCCAGAAAAGAATATGCCTTCTA 4677 |||| | || || |||||||| || | ||||| || ||||| ||||| || ||||| | Sbjct 37462 AACCACGTTTCTTGAGCCAAAAGATGGAAGCAAAGGAACCAGAGAAGAAGATACCTTCGA 37521 Query 4678 CGGCGGCAAACGCTACTAATCGGGACCCGAACGAGCTGGCTTTGTCTTTAATCCATTTTA 4737 | || ||||| || || | || | || || | | |||| |||||| || | Sbjct 37522 CAGCAGCAAAGGCAACAAGGCGCTCAGCAAAGGAACCG--TTTGAGGA-AATCCACTTGA 37578 Query 4738 ATGCCCAGTTAGCTTTTTTCTTAACGCACGGAATTGTGTATATAGCGTTAAATAATTTAC 4797 | ||||| | ||| ||| |||| | || || || |||| ||||| ||| | | Sbjct 37579 AGGCCCAATCAGCCTTTCTCTTGATACAAGGGATAGTGTCAATAGCAGAAAAGAGCAT-- 37636 Query 4798 TTTTTTCAAATGGGT--CTTGAATATAAGTGTCTATTAGTAGGCTATACATTTCAGAATG 4855 || |||| ||| | ||| ||||||||||| || | || || || |||| | || Sbjct 37637 TTCTTTCTCTTGGTTATCTTTGATATAAGTGTCAATCAAAAGACTGTAAGTTTCTGCGTG 37696 Query 4856 TATATTTTCTATAGCAATCTGAAATCCGTAAAAGCATCTAGCTTCTGTTA-CTTGAACTT 4914 || ||||| || || ||||| || || || ||| ||||||| | | |||| |||| Sbjct 37697 AATGTTTTCAATCATGATTTGAAAGCCATAGAAACATTTAGCTTCAGGAATCTTG-ACTT 37755 Query 4915 CGTTACAAAATCTTTCTACTAAGTTTTCGTTTACTATACCGTCACTGGCTGCAAAAAACG 4974 | | |||||| ||| || |||||||| || || || || || | ||||| || | Sbjct 37756 CATCACAAAAGTTTTGAACCAAGTTTTCATTAACAATGCCATCTGAACCAGCAAAGAAGG 37815 Query 4975 CCAAAACATGAGATATAAAGTACTGTTC---GTCAGGCTTAAGTTTTTTCCAGTGGGGCA 5031 |||| ||| |||| |||||| | |||| || | | | |||| ||| | | | Sbjct 37816 CCAAGACACGAGAGATAAAGAAACGTTCATTTTCGGTCATTTTGTTTTCCCAATCATGAA 37875 Query 5032 AATCTTTAGTTAAATCAACTTCTTCAACAGTCCAAAACGACGCTTCCGCTTTTTTGTA 5089 ||| || | ||||| | ||||||| | |||||||| || ||||| |||||||| || Sbjct 37876 GATCCTTGCTCAAATCGATTTCTTCAGCTGTCCAAAAGGAAGCTTCAGCTTTTTTATA 37933 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427046685386480