Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopus_20microsporus_20var._20microsporus_20[genbank_20GCA_5F00208 3745.1_202017-04-12] 560 sequences; 24,950,816 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq70 365 6e-96 seq106 304 2e-77 seq53 163 4e-35 >seq70 Length=105670 Score = 365 bits (404), Expect = 6e-96 Identities = 1346/2094 (64%), Gaps = 26/2094 (1%) Strand=Plus/Plus Query 76811 TGTACGTAGATAGTACATACCAGTTTTTAGACCCAGACTCCATCCGTAGAAATGCATGCT 76870 |||||| || || ||||| || || |||| ||| ||| || || || ||||| || Sbjct 2991 TGTACGAAGGTAATACATGCCTGTCTTTAATCCCTTTTGCCAGCCATAAAAGTGCATACT 3050 Query 76871 TGTCAGTTTGGAATAACTAGGATCGGCTATATGAATATTCATCGACTGACTTTGATCGAT 76930 || || || | | | || || || ||| || |||| |||||||| || || Sbjct 3051 GGTGAGCTTACCAAAGTTGGGTTCAGCCATAAAGATGTTCAAACTTTGACTTTGGTCAAT 3110 Query 76931 GAAAGCTCCTCTATCAGCCGCCATTTTTATAATGGTCTTTTGAGGAATTTCCCAAATAGT 76990 | || || | |||||| ||||| | || || || ||||| |||||||| | ||| Sbjct 3111 ATACGCACCACGATCAGCAGCCATGTCAATGATAGTACGTTGAGAGATTTCCCAGACAGT 3170 Query 76991 TTTGAAAACTTGTTTGATATCATCTGGAAGGTTTGTA---TTTTGAATGGAACCACCATC 77047 ||| | | | ||| | | | || | | | | || ||||| || || || || Sbjct 3171 CTTGTAGAGATCTTTCAAGTTTTGAGGGATGCTGGGCACGTTCTGAATAGACCCTCCGTC 3230 Query 77048 TGATATAATTGTATTCTTTATATCATCATTCCACAATTTCCTCTCTGTTAAAACTCTAAG 77107 | || || | ||||| | |||||| ||||| | | | || | | | | || Sbjct 3231 AGCCATGATCATGTTCTTCACATCATCGTTCCAGAGACCCATATCGACCAGATCACGGAG 3290 Query 77108 GAGATGAGGATTAACTATTTGAAATTCTCCAGACAATACTCTACGAGTGTAAATATTACT 77167 | ||| || || ||||| |||| || || | || | ||| ||||| | || Sbjct 3291 TAACCAAGGGTTGACCATTTGGTATTCACCTGAGAGCACACGACGGGTGTAGAAGTTGGA 3350 Query 77168 GGTATATGGTTCCACAGATTCATTGTTTCCCAAAATTTGAGCAGTAGAAGCAGTTGGCAT 77227 || || ||||| | | |||||||| || | ||||||| ||| || ||||| ||||| Sbjct 3351 TGTGTAAGGTTCAAAACATTCATTGAAACCGAGCATTTGAGAAGTGGAGGCAGTAGGCAT 3410 Query 77228 AGGTGCCACCAATAAACTATTTCTGAGACCATGTGTTCTGATTTTATCTTTTAGATATTT 77287 ||| || |||| | | || | || |||||| | || || || || || Sbjct 3411 AGGAGCAACCAGCAGAGAGTTGCGGACACCATGCTTAGCAATCTTTTCCTTGAGTGCGGC 3470 Query 77288 CCAATCCCAAAGATCTGAAGGTACAACATCCCAAAGATCGTATTGTAGAATTCCGTTACT 77347 ||| ||||| || | | |||| |||| ||| | || ||||| || || || || Sbjct 3471 CCAGTCCCAGAGGTTGGTAGGTGTGACATTCCACATGTCATATTGCAGGATACCCTTGGA 3530 Query 77348 AGCATATGATCCATTATATGTTTCATAAGGTCCTTCTGTTTCAGCTAGTTCACAACTCGC 77407 || || | ||| ||||| |||||||| | ||||||| | || || || Sbjct 3531 CACAGGGCTGCCTTCATAGGTTTCGTAAGGTCCATACTTTTCAGCCAACTCGCAGGAGGC 3590 Query 77408 TTCCAATGCTCCGTAATAAATTGTTTCGAAAATCTTCTTATTGAGAT-CTTGTGCTTCAA 77466 ||||| || | | || || ||||| || || | | || | | |||| |||||| Sbjct 3591 TTCCAGGGCAGCATGGTAGATGGTTTCAAAGATTTGAATGTTCAACTGCTTG-GCTTCAG 3649 Query 77467 TACTATCAAACGGATAATGTAAAAGAATAAAGGCATCTGCTAATCCCTGAACTCCAATAC 77526 ||| || |||||| | | | || || | || ||||| || ||||| || | || Sbjct 3650 GTGAATCGAATGGATAACGAAGAGCCATGAAAGTGTCGGCTAAGCCTTGAACACCTAAAC 3709 Query 77527 CAATAGGTCTATGTCTCTTATTGGAAATTTTAGCTTCTGGAATAGGATAATAATTAATGT 77586 |||| ||||| |||||||| ||||| ||| ||||| | |||||| ||||| || | Sbjct 3710 CAATCGGTCTGTGTCTCTTGTTGGATCTTTCGGCTTCGATGACAGGATAGTAATTGATAT 3769 Query 77587 CTATAATTTTATTGAGATTTCTAACAACTACTTTAACCACGTCCTTTAGTTTAAGAAAAT 77646 | || || || || | |||||| | || || || || | ||||| | |||| Sbjct 3770 CGATGATCTTGTTCAAGTTTCTAGTGATAACCTTGGTAACATCGTGCAGTTTTTGGAAAT 3829 Query 77647 CAAATCTTCCATCTAT--AACAAACATGTT--CAAAGCTATAGATGCTAGATTACAAACT 77702 || | || | ||||| | || | | || || ||| || || || | ||||| || Sbjct 3830 CATACTTTTC-TCTATTGATCACATAGGTAGGCAGAGCAATGGAGGCCAAGTTACAGACA 3888 Query 77703 GCTACCTCATTAGCGTTGGCATATTGTATTATCTCGGTACATAGATTACTACATTTGATA 77762 || || |||| || | | |||| | || || ||||| ||||| || || ||||| Sbjct 3889 GCGACTTCATCAGGACTCGAGTATTCAACAATTTCTGTACACAGATTGCTGCACTTGATC 3948 Query 77763 GTGCCCAGATTTTGTTGGTTGCTCTTTTTATTGCATGAGTCCTTATAAAGAATAAACGGA 77822 || |||| ||||| || || |||||| | || || | |||||||| || || || ||| Sbjct 3949 GTACCCAAGTTTTGCTGATTACTCTTTCTGTTACAAGCATCCTTATAGAGTATGAATGGA 4008 Query 77823 GTCCCGGTTTCAATCTGTGATTCGATAATAGATTTCCAGACGACTCTAGCTTTTATCATA 77882 | || || || | || | ||| | ||| | | ||| | | ||| || ||| | Sbjct 4009 TTGCCTGTCTCCGTTTGAGCTTCCAAAATGGCATACCACAGCTTTTGAGCCTTGATCGTT 4068 Query 77883 GATTTGTATCGCCTC--TCTCTTTCATATTGAGTATATAGCCGTTCAAATTCATCTCCCC 77940 | | || | | || || | ||| |||| ||| || |||| || || |||| Sbjct 4069 --TCTCTAGCTCTTCCTTCACGTTCGTATTTTTCATAGAGAGCAACAAACTCGTCACCCC 4126 Query 77941 AAACATCATCCAATCCAGGGCATTCATTTGGGCACATCAATGACCAGTCACCATCTTCCT 78000 | | |||| |||||||| ||||| || || | || ||||| |||||| | || Sbjct 4127 AGATTTCATGTAATCCAGGAGCCTCATTGGGACAAAACAGAGACCAATCACCACCGTCTC 4186 Query 78001 TAACTCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTAT 78060 | || || | ||| || |||||||| ||||| |||||| || ||||| || | || Sbjct 4187 TGACACGCTGCATGAAAAGATCAGGAATCCAGAGAGCATAGAACAGATCACGAGCCCTGA 4246 Query 78061 GTTCTTCATTTCCTGTATTCTTTTTAAGATCGAGAAACTCCATAATATCAGAATGCCATG 78120 ||| || || || || ||| | || | ||| | ||| || | |||||| | Sbjct 4247 TTTCGTCTTTGCCAAAGTTTTTTCGCAAGTCTAAAAAGGTAAAAATGTCTGCATGCCAAG 4306 Query 78121 GTTCTAGATATATTGCCATAACTCCAGGTCGTTTATTACCTCCCTGATCTATATATCTGG 78180 |||| | || ||||| | | || || || |||||||| || ||||| | ||| | | Sbjct 4307 GTTCCAAGTACATTGCGAATGCGCCCGGACGCTTATTACCACCTTGATCGACATAACGAG 4366 Query 78181 CGGTGTTATTATAAACTCTCAACATTGG-AATAATACCGTTAGATGTTCCATTTGTTCCA 78239 | || || || |||| | | ||| || || ||| ||||| || || || || || Sbjct 4367 CCGTATTGTTGAAAACACGTAGCATGGGCAACAAT-CCGTTGGAGTAACCGTTGGTGCCG 4425 Query 78240 GAAATATAACTTCCACTTGCGCGAATATTACTAATGGATATCCCTATTCCTCCTGCCATC 78299 | ||| || |||||| || ||||| || |||| || || || || ||||| || Sbjct 4426 GCAATGTATGATCCACTAGCACGAATGTTGTGAATGTTTAAGCCAATACCGCCTGCTGTC 4485 Query 78300 TTAGATATTAGAGCGCAACGTTTCAATGTATCGTAGATACCCTCTATACTGTCATCCATC 78359 || || ||| |||| || ||| | || || |||||||| || || || || || Sbjct 4486 TTGGAGATTTGAGCACAGATTTTGAGCGTCTCATAGATACCTTCGATCGAATCTTCTTTC 4545 Query 78360 ATGTTAAGAAGAAAACAGCTAGACATTTGATGATGAACAGTTCCTGCATTAAATAATGTC 78419 ||| | || | || || |||||| || || || || ||||||||||||| || Sbjct 4546 ATGGTGAGCAAGAAGCAAGAAGACATCTGGGGACGAGGTGTGCCTGCATTAAATAGAGTA 4605 Query 78420 GGAGATGCATGCGTAAACCATTTTTCAGAAAGTAGATTGTATGTTTCAATAGCTGATTCT 78479 ||| || || ||||| || |||| || | | |||||||| |||||||||| || Sbjct 4606 GGACTAGCGTGTGTAAAGTATCTTTCGGACATCAAGTTGTATGTCTCAATAGCTGCATCA 4665 Query 78480 ATGTCCCATTGATGAATTCCTACCGCTACACGCATCAACATATGCTGAGGTCTTTCAACC 78539 || || | ||| || || | ||| |||||||| | || ||||||||| | ||| | Sbjct 4666 ATATCGGTTCCATGGATACCGATCGCAACACGCATGATCAAATGCTGAGGACGTTCGGCA 4725 Query 78540 GTCTTATTATTTATTTTCAACAAGTATGATTTTTCCAAAGTTTTAAAACCAAAATAGTTG 78599 |||| | || || | | ||| || || | |||||| |||||||| ||||| Sbjct 4726 ATCTTGCCGTCAATCTTGAGAAGGTAAGAACGCTCGAGAGTTTTGAAACCAAAGAAGTTG 4785 Query 78600 TA--TGAAAAGTCTCTCTCGTAAATAATAACAGAATTTA---GTTTATCTTTGTATTTGG 78654 || ||||| || | || || || || |||| || | | | | | || | || Sbjct 4786 TACTTGAAA--TCACGGTCATAGATGATGGCAGAGTTCAAGCGGTCAGCGTTATCCATGA 4843 Query 78655 TAACAATATCCATGACAGTAGTTGAAATAATAGGAGATCGTACACCATTTTTAGGATTAA 78714 ||| | | | | || || || || || || || || || | || ||||| | Sbjct 4844 CAACTTTGTACGTTTCATTA---GAGATCATGGGTGAGTGTTTGCCTGTCTTGGGATTCA 4900 Query 78715 CATAGTTAAATAAATCTTCCATTACATCACTAAATAGtttttttGTTTCCTTGTGTAGAT 78774 |||| || | || ||||| ||||| | | ||| | ||||| ||||||||||| |||| Sbjct 4901 CATAATTGTACAAGTCTTCAATTACTTGAGAAAAGACCTTTTTGGTTTCCTTGTGAAGAT 4960 Query 78775 TAGATACAGCTATTCTTGCAGCTAGAATAGCATAATCAGGATGTTGTGTAGTACAAGTGG 78834 |||| | || || | ||||| | | ||||||||||||||| | || || | | Sbjct 4961 TAGAAATGGCAATGCGCGCAGCCAACAGAGCATAATCAGGATGGCGAGTGGTCATATAAG 5020 Query 78835 CTGCTATTTCTGCCGCTAAAATATCTAACTCTATAGTTGTGACCCCATTATATA 78888 | ||| ||||||| || | |||| | || | |||||| || || | |||| Sbjct 5021 CAGCTGTTTCTGCAGCAAGGTTATCGAGTTCGACAGTTGTAACACCTTGGTATA 5074 >seq106 Length=79482 Score = 304 bits (336), Expect = 2e-77 Identities = 576/839 (69%), Gaps = 19/839 (2%) Strand=Plus/Plus Query 47852 TTGATATTCACCCACACGTTTCTCGAAAAAATTAGTTTTGCCTTCCAATGATATATTTTC 47911 |||||| || ||||| || || || || || || ||||||| | || || | || Sbjct 37103 TTGATAATCGGAGACACGCTTTTCAAAGAAGTTGGTCTTGCCTTGGAGAGAGATCATGTC 37162 Query 47912 CATAAAATCAAATGGATTAACTGCATTATAAAtttttttAAATCCTAATTCTGAAATCAG 47971 |||||| |||||||||||| || | ||||| || | || || | | || || Sbjct 37163 CATAAAGTCAAATGGATTAGTAGCCATGTAAATCTTGTCGAACCCAAGAGCAACCATGAG 37222 Query 47972 TCTATCTGCAACGAATTCTATATATCTTTTCATCATTTCACAATTCATTCCTATAAGTTT 48031 | ||| ||||||||||| || ||| ||||| || ||||||| || || || Sbjct 37223 ACGATCAGCAACGAATTCAATGTATTGACACATCAAGGCAGAATTCATGCCAATGAGAGC 37282 Query 48032 AACTGGTAGAGCCTCCGTAAGAAACTCTTGTTCGATAGTGACAGCATCCACTAT--TATC 48089 ||| || ||||| ||||| | ||| |||||||| || ||||||| |||| || |||| Sbjct 37283 AACGGGAAGAGCATCCGTCAAAAATTCTTGTTCAATGCTGACAGCTTCCAAGATGATATC 37342 Query 48090 GATGTTACCGTTTCCTCACTTGGTGGAT-ACAACAAATGTTTAAACATTAAACATGCAAA 48148 || || ||| | || || | | || | | || |||| | | ||| ||||| Sbjct 37343 CTTG--ACGCGTTCTTGGCTAGGACGCTTACGA-AGGTGGGTAAATAAAAGACAAGCAAA 37399 Query 48149 ATCACAATGAAGACCTTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGACCGGGCAT 48208 ||| ||||||||||||||| | || || ||||| || ||||| | ||||||||| Sbjct 37400 GTCAGTATGAAGACCTTCATCACGACAGATCAATTCATTGCTGAATGTCAAACCGGGCAT 37459 Query 48209 TAGTCCACGTTTTTTGAGCCAAAATATTGCCGCGAAAGATCCAGAAAAGAATATGCCTTC 48268 | |||||||| ||||||||||| || | || || || ||||| ||||| || ||||| Sbjct 37460 CAAACCACGTTTCTTGAGCCAAAAGATGGAAGCAAAGGAACCAGAGAAGAAGATACCTTC 37519 Query 48269 TACGGCCGCAAATGCGGTAAGTCTCTCTCCGTAACTGGCTTCGTT---GTGTATCCACCG 48325 || || ||||| || ||| | ||| | | || |||| | |||||| Sbjct 37520 GACAGCAGCAAAGGCAACAAGGCGCTCAGCAAA---GGAACCGTTTGAGGAAATCCAC-- 37574 Query 48326 TTGT--GCCCAATCAGCCTTCTTCTTTACACAAGGCATTGTTTCTATAGCATTAAAGAGA 48383 ||| |||||||||||||| |||| | |||||| || || || |||||| |||||| Sbjct 37575 TTGAAGGCCCAATCAGCCTTTCTCTTGATACAAGGGATAGTGTCAATAGCAGAAAAGAGC 37634 Query 48384 AAGtttttttCATTGCTATCTTTAACGTAAGTATCTATTAAAAGACTATACATTTCGGAG 48443 | | ||| || | | ||||||| | ||||| || || |||||||| || |||| | | Sbjct 37635 ATTTCTTTCTCTTGGTTATCTTTGATATAAGTGTCAATCAAAAGACTGTAAGTTTCTGCG 37694 Query 48444 TGAATATTTTCAATTGCCATCTGAAATCCGTAAAAACATCTCGCTTCTGTGATCTGTACC 48503 ||||| |||||||| || ||||| || || |||||| | ||||| | |||| || Sbjct 37695 TGAATGTTTTCAATCATGATTTGAAAGCCATAGAAACATTTAGCTTCAGGAATCTTGACT 37754 Query 48504 TCCGTACAAAATCGTTCAGCCAAATTCTCATTTACTATTCCATCACTAGCAGCAAAAAAT 48563 || |||||| || | |||| || ||||| || || ||||| | ||||||| || Sbjct 37755 TCATCACAAAAGTTTTGAACCAAGTTTTCATTAACAATGCCATCTGAACCAGCAAAGAAG 37814 Query 48564 GCTAATACATGTTTAATAAAATATTTTTCGTTGGAAGTCAGTTTATT---CCAGTCATTG 48620 || || ||| | ||||| | ||| || |||| ||| || ||| |||| Sbjct 37815 GCCAAGACACGAGAGATAAAGAAACGTTCATTTTCGGTCATTTTGTTTTCCCAATCATGA 37874 Query 48621 ATATCTTTTGATATATCTACTTCTTCAGCTGTCCAAAATGATGCCTCTGCTTTTTTATA 48679 | ||| || | ||| | |||||||||||||||||| || || || ||||||||||| Sbjct 37875 AGATCCTTGCTCAAATCGATTTCTTCAGCTGTCCAAAAGGAAGCTTCAGCTTTTTTATA 37933 >seq53 Length=125223 Score = 163 bits (180), Expect = 4e-35 Identities = 465/714 (65%), Gaps = 3/714 (0%) Strand=Plus/Minus Query 76820 ATAGTACATACCAGTTTTTAGACCCAGACTCCATCCGTAGAAATGCATGCTTGTCAGTTT 76879 ||||||||| ||||| ||||| ||| |||| | || || ||||| |||| ||| Sbjct 93110 ATAGTACATGCCAGTCTTTAGTCCCTTCTTCCAGGCATAAAAGTGCATAGAAGTCAATTT 93051 Query 76880 GGAATAACTAGGATCGGCTATATGAATATTCATCGACTGACTTTGATCGATGAAAGCTCC 76939 | | | | || ||||| || | |||||| || ||| |||||| || || ||||| Sbjct 93050 GCCAAAGTTTGGTTCGGCAGTAAATAAATTCATAGATTGAGATTGATCAATAAAGGCTCC 92991 Query 76940 TCTATCAGCCGCCATTTTTATAATGGTCTTTTGAGGAATTTCCCAAATAGTTTTGAAAAC 76999 ||||||||| ||||| | ||||| || |||| | ||| ||||| | || ||| | | Sbjct 92990 TCTATCAGCGGCCATGTCAATAATAGTTCTTTGTGAAATCTCCCACACGGTCTTGTATAG 92931 Query 77000 TTGTTTGATATCATCTGGAAGGTTTG---TATTTTGAATGGAACCACCATCTGATATAAT 77056 || ||||| |||||| |||| | | || || || ||| |||| | || || Sbjct 92930 TTTTTTGAGATCATCAGGAATGCCAGGAATACGCTGGATACTACCGCCATGAGCGATCAT 92871 Query 77057 TGTATTCTTTATATCATCATTCCACAATTTCCTCTCTGTTAAAACTCTAAGGAGATGAGG 77116 | ||||| || | ||||||||| || | || | | | | | | | ||| | Sbjct 92870 CATGTTCTTGATGTTATCATTCCATAAATCGAGTTCAATGAGATCATTCAATAAATGCTG 92811 Query 77117 ATTAACTATTTGAAATTCTCCAGACAATACTCTACGAGTGTAAATATTACTGGTATATGG 77176 || |||||||| ||||| || || | ||| || |||||||| || || || || Sbjct 92810 GTTGACTATTTGGAATTCACCGCTTTGAACACGACGCGTATAAATATTGCTAGTGTAAGG 92751 Query 77177 TTCCACAGATTCATTGTTTCCCAAAATTTGAGCAGTAGAAGCAGTTGGCATAGGTGCCAC 77236 || | |||| || || ||||| |||||| ||| |||||| |||||||| || || Sbjct 92750 CTCGAAGCATTCGTTATTACCCAATATTTGACTAGTGCTAGCAGTAGGCATAGGAGCAAC 92691 Query 77237 CAATAAACTATTTCTGAGACCATGTGTTCTGATTTTATCTTTTAGATATTTCCAATCCCA 77296 | | | || | || ||||| | | ||||| || || | | | |||||||| Sbjct 92690 AAGAAGAGAGTTACGGACACCATATTTCCTGATATTGGCTCTCAAAGTATTCCAATCGAG 92631 Query 77297 AAGATCTGAAGGTACAACATCCCAAAGATCGTATTGTAGAATTCCGTTACTAGCATATGA 77356 | | || || | |||| ||| | ||||| ||| ||||| || | ||| || || Sbjct 92630 ATGTTCCGAGCCTTTGACATTCCATAAATCGTGTTGAAGAATACCTTGACTTACAGGCGA 92571 Query 77357 TCCATTATATGTTTCATAAGGTCCTTCTGTTTCAGCTAGTTCACAACTCGCTTCCAATGC 77416 || | || || ||||| ||||| | | || || || ||||| ||||| | || Sbjct 92570 GCCTTCGTAAGTCTCATAGGGTCCCTGTTCTTTGGCAAGCTCACATGAAGCTTCTAGAGC 92511 Query 77417 TCCGTAATAAATTGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCAATACTATCAAA 77476 | |||| ||| |||||||||| | | || | | |||||| | |||||| Sbjct 92510 AGCAAAATAGATTCTTTCGAAAATATCTCTGTTCAATTGAGCAGCTTCAGGAGAATCAAA 92451 Query 77477 CGGATAATGTAAAAGAATAAAGGCATCTGCTAATCCCTGAACTCCAATACCAAT 77530 ||||| | | | ||||| ||||| || | || ||||| || | ||| || Sbjct 92450 GGGATAGCGCATCAAGATAAACGCATCAGCAAGCCCTTGAACGCCGAGACCGAT 92397 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694663937318400