Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopus_20microsporus_20var._20microsporus_20[genbank_20GCA_5F00208 3745.1_202017-04-12] 560 sequences; 24,950,816 total letters Query= NC_032001.1 Length=327147 Score E Sequences producing significant alignments: (Bits) Value seq109 172 1e-37 seq165 125 1e-23 seq135 120 6e-22 seq11 114 3e-20 seq7 114 3e-20 seq106 109 1e-18 seq93 100 6e-16 seq91 100 6e-16 seq148 93.3 9e-14 seq287 86.0 1e-11 >seq109 Length=78937 Score = 172 bits (190), Expect = 1e-37 Identities = 175/228 (77%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||||||||| || ||||| |||| || | || ||| ||||| ||||| ||||| Sbjct 18293 ACCACCACGGAGACGAAGGACCAAGTGAAGAGTAGATTCCTTTTGAATGTTATAGTCGCT 18352 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 || || || ||||| || |||||||| || |||||||| | ||||||||| ||| || Sbjct 18353 TAGGGTACGACCATCTTCGAGTTGTTTACCAGCAAAGATGAGACGTTGTTGATCAGGAGG 18412 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 |||||| ||||||||||| |||||| |||||| | ||||||||||| |||| |||||| Sbjct 18413 AATACCTTCCTTGTCTTGAATCTTTTGTTTTACATTGTCGATAGTGTCAGAAGATTCGAC 18472 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 ||| | ||| || ||||| || || | ||||| || || || ||||| Sbjct 18473 TTCTAAAGTAATTGTCTTTCCAGTAAGTGTCTTGACAAAGATTTGCAT 18520 Score = 86.0 bits (94), Expect = 1e-11 Identities = 53/57 (93%), Gaps = 0/57 (0%) Strand=Plus/Plus Query 168754 TAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCG 168810 ||||||||||||||||||| | ||||||||||| | ||||||||||||||||||||| Sbjct 6716 TAGTATAGTGGTTAGTATCTCCGCCTGTCACGCGGAAGACCGGGGTTCAATTCCCCG 6772 >seq165 Length=49949 Score = 125 bits (138), Expect = 1e-23 Identities = 133/173 (77%), Gaps = 2/173 (1%) Strand=Plus/Plus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTC-AG 282930 ||||||||| || || || || | || | || ||| ||||||||||||||||| Sbjct 37827 ACCACCACGAAGACGGAGAACTAAGTGGAGAGTAGATTCCTTTTGGATGTTGTAGTCGCT 37886 Query 282931 CAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCG 282990 |||| || || || || || |||||||| ||||||||||| | ||||||||||||| | Sbjct 37887 CAAG-GTACGACCGTCTTCGAGTTGTTTACCGGCAAAGATAAGACGTTGTTGGTCAGGAG 37945 Query 282991 GAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAA 283043 ||||||| ||||||||||| |||||| || ||| | || || ||||| ||| Sbjct 37946 GAATACCTTCCTTGTCTTGAATCTTTTGCTTGACGTTGTCAATGGTGTCGGAA 37998 >seq135 Length=64565 Score = 120 bits (132), Expect = 6e-22 Identities = 436/675 (65%), Gaps = 8/675 (1%) Strand=Plus/Minus Query 316168 TCTTCACCGGAAGCATAACGCCATTGGATGTACTGATTGGGCGTCATGTCAAGATGATCC 316227 |||||||||| ||||||||||||||||| | ||||| || |||| | ||| Sbjct 20738 TCTTCACCGGTGTGGTAACGCCATTGGATGTATTCGTTGGGGGTTTTGTCCAAGTGACGT 20679 Query 316228 TCGATGTGGTGGAAAGCGTGCTGTGCCACGTAAGCAAGACGCATATTTGGATGCTTCCAA 316287 ||||||||||||||||| || || || || || |||| ||||| || ||||| |||| Sbjct 20678 TCGATGTGGTGGAAAGCATGTTGGGCGACATAGGCAATACGCAAGTTAGGATGTCTCCAG 20619 Query 316288 ACGCTACCGTTAGTAGTTTCCATCTGCCCTGTTAGCACTTTAATGAGAGTACTTTTTCCC 316347 || |||| | || || | || || | || || || | || || || Sbjct 20618 ACAGTACCAACCTCGGACTCGATTTCACCAGTCAACAACTTGATCAAGGTGGACTTACCA 20559 Query 316348 GCGCCGTTTTCACCCACGACACCGATCCTGGAGTTGAGCGATACCTGGGCATTCACGTTG 316407 || ||||| ||| | ||| | | | ||| || || || | |||| | | || Sbjct 20558 GCACCGTTGGGACCAATGACGGCAACACGAGAGGCAAGAGA-ACAT-TGCATAGA-GATG 20502 Query 316408 TCGAAGACCAGTTT---GTCCGTCCCAGGATACTTGAAACCCACCCCGCGAAGCTTCATG 316464 |||| | | || ||| | ||||| || | ||| | || | ||||| | Sbjct 20501 TCGATCAATTGCTTGCGGTCAGAACCAGGGTATTGGAAGTCGACGTTCTTCATCTTCAAG 20442 Query 316465 ATGGCACGGTCCTTCGAAGTGATACCCTCGAGAAAGCCGGGTTCGGGGAATTTCCACGTA 316524 || ||||| ||||| | ||||||| || | || || ||||| ||||| || | Sbjct 20441 ATAGCACGTTCCTTAGTCTTGATACCTTCCAAGAAACCAGGTTCAGGGAAAGAGAACTTG 20382 Query 316525 GTCTTCGTCTCGGCGAGCGTGTAGTAACTTGCAGATTCGGGACGCTTCTTCACGAATTCG 316584 | | || | | | | ||||||| |||| ||| |||||| ||||||||| Sbjct 20381 ATTTGAGTAGCTTCCAAGGAGTAGTAAGAAGCAGCACGAGGAACCTTCTTGACGAATTCG 20322 Query 316585 GACAGATTTCCTTTATACTTCTTCAGCTTCAGGTTGGGTTCGTAATGGATGATAGAAGTA 316644 |||| || || ||||| ||| ||||| |||||| ||||| || ||||| | | Sbjct 20321 GACAAGTTACCCTTATAACGCTTGAGCTTGTAGTTGGGCTCGTAGTGAATGATGTCGGAA 20262 Query 316645 CAGACAGCATCGAGGAAACCAGAATCGTGTGATACAATCACACATGAAACGCCTTTTAGG 316704 |||||| ||| | ||||||||| ||||| || ||||| | | | ||| || | Sbjct 20261 CAGACATGATCCAAGAAACCAGAGTCGTGGGAAACAATGATGGAGGTAACAGTCTTCAAA 20202 Query 316705 TTGACCAGATAGTCGATCAGCCAGCTCACATTCGAC-ACAGAAAGATGGTTGGTCGGTTC 316763 | || |||| || |||| || || ||| ||| | || ||||| ||||| Sbjct 20201 CCAAGGAGGTAGTTCTCCAACCAGGCAACGTT-GACAACATCCAAGTGATTGGTAGGTTC 20143 Query 316764 GTCAAGTAGTAGTAGCTTCGCGTCCAACAGCATAGCGCGTGCGAGAGCAAGCTTCATTTT 316823 ||| | | || | | |||| || || |||||| || || |||||||||||||| || Sbjct 20142 GTCCAACAAGAGGATATCAGCGTTCATCAACATAGCACGGGCAAGAGCAAGCTTCATCTT 20083 Query 316824 CCACCCCCCGGAAAG 316838 ||| || || || || Sbjct 20082 CCAACCACCAGAGAG 20068 >seq11 Length=236632 Score = 114 bits (126), Expect = 3e-20 Identities = 135/183 (74%), Gaps = 0/183 (0%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||| ||||| || ||||| |||| || | || |||||||||||||||||| ||| Sbjct 183 ACCGCCACGAAGACGAAGGACCAAGTGAAGAGTAGATTCTTTTTGGATGTTGTAATCACT 124 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 | || || ||||| || || || || ||||| || || | ||||||||| ||| || Sbjct 123 CAAAGTACGACCATCTTCGAGCTGCTTGCCGGCGAAAATGAGACGTTGTTGATCAGGAGG 64 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 ||||| |||||||||||||||||| || || | |||||| | || || | ||||| Sbjct 63 GATACCTTCCTTGTCTTGGATCTTTTGCTTGACATTTTCGATACTATCAGAGGACTCGAC 4 Query 283052 TTC 283054 ||| Sbjct 3 TTC 1 >seq7 Length=279440 Score = 114 bits (126), Expect = 3e-20 Identities = 147/200 (74%), Gaps = 2/200 (1%) Strand=Plus/Minus Query 315697 GCCATGGCACCGAGACTCTCGCGGTCCACAAAGTTGGTCGGCTCATCAAGAACGATGACG 315756 |||| ||||||||| || || |||| | | ||||| || || |||||||| | | | Sbjct 49943 GCCAAAGCACCGAGAGATTCACGATCCAAATAATTGGTAGGTTCGTCAAGAACAAGCATG 49884 Query 315757 TGGGGT-TGTTGCCATAGAGCGGCGCCGATAACGAGCTTTAGTTTTTGCCCACCAGACAG 315815 || ||| |||| ||| | ||| || || || || | ||| | ||||| |||||||| || Sbjct 49883 TGAGGTCTGTT-CCACATAGCAGCACCAATGACCAACTTGACCTTTTGACCACCAGAGAG 49825 Query 315816 TCCACGGATGCGAGAATGAGTGGTAAATTCTGGGTCAAGGCCAACATTAGCCATATGTTC 315875 |||||||| ||||| ||||| | ||||| || ||||||||||| | ||||| || | Sbjct 49824 ACCACGGATACGAGAGTGAGTAGCGAATTCGGGTTCAAGGCCAACTTCAGCCAAGTGCTT 49765 Query 315876 TTCCACGTTCTTCGCGGTCA 315895 ||| | | ||| || |||| Sbjct 49764 TTCGATTTCCTTGGCAGTCA 49745 Score = 109 bits (120), Expect = 1e-18 Identities = 433/676 (64%), Gaps = 8/676 (1%) Strand=Plus/Minus Query 316167 GTCTTCACCGGAAGCATAACGCCATTGGATGTACTGATTGGGCGTCATGTCAAGATGATC 316226 ||||||||| | ||||||||||||||||| | ||||| || |||| | ||| Sbjct 49467 GTCTTCACCAGTGTGGTAACGCCATTGGATGTATTCGTTGGGGGTTTTGTCCAAGTGACG 49408 Query 316227 CTCGATGTGGTGGAAAGCGTGCTGTGCCACGTAAGCAAGACGCATATTTGGATGCTTCCA 316286 |||||||| |||||||| || || || || || |||| ||||| || ||||| |||| Sbjct 49407 TTCGATGTGATGGAAAGCATGTTGAGCGACATAGGCAATACGCAAGTTAGGATGTCTCCA 49348 Query 316287 AACGCTACCGTTAGTAGTTTCCATCTGCCCTGTTAGCACTTTAATGAGAGTACTTTTTCC 316346 || |||| | || || | || || | || || || | ||| || || Sbjct 49347 GACAGTACCAACCTCGGACTCAATTTCACCAGTCAACAACTTGATCAAGGTAGACTTACC 49288 Query 316347 CGCGCCGTTTTCACCCACGACACCGATCCTGGAGTTGAGCGATACCTGGGCATTCACGTT 316406 || ||||| ||| | ||| | | | |||| || || ||| ||| | | | Sbjct 49287 AGCACCGTTGGGACCAATGACGGCAACACGGGAGGCAAGAGAACACTG--CATAGA-GAT 49231 Query 316407 GTCGAAGACCAGTTTG---TCCGTCCCAGGATACTTGAAACCCACCCCGCGAAGCTTCAT 316463 ||| | | | ||| || | |||||||||| ||| | || | |||| Sbjct 49230 GTCAATCAGTTGCTTGCGGTCAGAACCAGGATACTGGAAGTCGACATTCTTCATTTTCAA 49171 Query 316464 GATGGCACGGTCCTTCGAAGTGATACCCTCGAGAAAGCCGGGTTCGGGGAATTTCCACGT 316523 ||| ||||| ||||| | ||||||| || | || || || || ||||| | | Sbjct 49170 GATTGCACGTTCCTTAGTCTTGATACCTTCCAAGAAACCAGGCTCAGGGAAAGAGAATTT 49111 Query 316524 AGTCTTCGTCTCGGCGAGCGTGTAGTAACTTGCAGATTCGGGACGCTTCTTCACGAATTC 316583 | | || | | | | |||||| |||| ||| |||||| |||||||| Sbjct 49110 GATTTGAGTAGCTTCCAAGGAATAGTAAGAGGCAGCACGAGGAACCTTCTTGACGAATTC 49051 Query 316584 GGACAGATTTCCTTTATACTTCTTCAGCTTCAGGTTGGGTTCGTAATGGATGATAGAAGT 316643 ||||| || || ||||| ||| ||||| ||||||||||| || ||||| | Sbjct 49050 GGACAAGTTACCCTTATAACGCTTGAGCTTATAATTGGGTTCGTAGTGAATGATGTCCGA 48991 Query 316644 ACAGACAGCATCGAGGAAACCAGAATCGTGTGATACAATCACACATGAAACGCCTTTTAG 316703 ||||||| ||| | ||||||||| ||||| || ||||| | | | ||| || | Sbjct 48990 ACAGACATGATCCAAGAAACCAGAGTCGTGGGAGACAATGATGGAGGTAACAGTCTTCAA 48931 Query 316704 GTTGACCAGATAGTCGATCAGCCAGCTCACATTCGAC-ACAGAAAGATGGTTGGTCGGTT 316762 | || |||| || |||| || || ||| ||| | || ||||| |||| Sbjct 48930 ACCAAGGAGGTAGTTCTCCAACCAGGCAACGTT-GACAACATCCAAGTGATTGGTAGGTT 48872 Query 316763 CGTCAAGTAGTAGTAGCTTCGCGTCCAACAGCATAGCGCGTGCGAGAGCAAGCTTCATTT 316822 |||| | | || | | |||| || || |||||| || || |||||||||||||| | Sbjct 48871 CGTCCAACAAGAGGATATCAGCGTTCATCAACATAGCACGGGCAAGAGCAAGCTTCATCT 48812 Query 316823 TCCACCCCCCGGAAAG 316838 |||| || || || || Sbjct 48811 TCCAACCACCAGAGAG 48796 >seq106 Length=79482 Score = 109 bits (120), Expect = 1e-18 Identities = 150/208 (72%), Gaps = 4/208 (2%) Strand=Plus/Minus Query 230205 GACGCTATTCC--TTGCCGTCTTATCGGCATGAATGCTGATCTCATGGGGCAATATATCG 230262 || ||| |||| |||| ||| || ||||||||| ||| | ||| | ||||| || | Sbjct 37297 GATGCTCTTCCCGTTGC--TCTCATTGGCATGAATTCTGCCTTGATGTGTCAATACATTG 37240 Query 230263 AATTCGTAGCTGATCGTATTTTCGTGGCGCTAGGGTACGAGAAAGTGTATAACTCCAAGA 230322 ||||||| ||||||||| | | || || || |||| ||| || | || | | | | Sbjct 37239 AATTCGTTGCTGATCGTCTCATGGTTGCTCTTGGGTTCGACAAGATTTACATGGCTACTA 37180 Query 230323 ACCCCTTCGCTTTTATGGAGCTCATTTCACTCCAGGGGAAAACTAACTTCTTCGAAAAGC 230382 | || || | |||||||| | || || ||||| || || || |||||||| ||||||| Sbjct 37179 ATCCATTTGACTTTATGGACATGATCTCTCTCCAAGGCAAGACCAACTTCTTTGAAAAGC 37120 Query 230383 GTGTCAGCGATTATCAAAGGCCCGGTGT 230410 ||||| |||||||||| | | ||||| Sbjct 37119 GTGTCTCCGATTATCAACGTGCTGGTGT 37092 >seq93 Length=91516 Score = 100 bits (110), Expect = 6e-16 Identities = 90/113 (80%), Gaps = 0/113 (0%) Strand=Plus/Minus Query 282990 GGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCG 283049 || ||||| |||||||||||||||||| || ||| | |||||| | || |||| |||| Sbjct 91510 GGGATACCTTCCTTGTCTTGGATCTTTTGCTTGACGTTTTCGATACTATCAGAAGATTCG 91451 Query 283050 ACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCATTTT 283102 ||||| | ||| || ||||| || || | |||||| ||||| || |||||||| Sbjct 91450 ACTTCCAAAGTAATGGTCTTGCCGGTAAGAGTCTTTACGAAGATTTGCATTTT 91398 >seq91 Length=92626 Score = 100 bits (110), Expect = 6e-16 Identities = 127/172 (74%), Gaps = 2/172 (1%) Strand=Plus/Plus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAG- 282930 ||||||||| || || || |||| || | || ||| ||||| |||||||| ||| Sbjct 69961 ACCACCACGAAGACGGAGAACCAAGTGAAGGGTAGATTCCTTTTGAATGTTGTAATCACT 70020 Query 282931 CAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCG 282990 |||| || || || || || |||||||| ||||| || || | ||||||||| ||| | Sbjct 70021 CAAG-GTACGACCGTCTTCGAGTTGTTTACCGGCGAAAATGAGACGTTGTTGATCAGGAG 70079 Query 282991 GAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGA 283042 | ||||| ||||| |||||||||||| || || | || || ||||| || Sbjct 70080 GGATACCTTCCTTATCTTGGATCTTTTGCTTGACATTGTCAATGGTGTCAGA 70131 >seq148 Length=59013 Score = 93.3 bits (102), Expect = 9e-14 Identities = 98/129 (76%), Gaps = 0/129 (0%) Strand=Plus/Plus Query 316167 GTCTTCACCGGAAGCATAACGCCATTGGATGTACTGATTGGGCGTCATGTCAAGATGATC 316226 |||||| || | |||||||||||| || ||||| | || |||||| | || | || | Sbjct 17981 GTCTTCGCCAGTAGCATAACGCCACTGAATGTATTCGTTTGGCGTCTTATCCAAGTGTTG 18040 Query 316227 CTCGATGTGGTGGAAAGCGTGCTGTGCCACGTAAGCAAGACGCATATTTGGATGCTTCCA 316286 |||||||| ||||| || || || || ||||| |||| ||| | ||| ||||||||||| Sbjct 18041 TTCGATGTGATGGAAGGCATGTTGAGCAACGTAGGCAATACGTAAATTGGGATGCTTCCA 18100 Query 316287 AACGCTACC 316295 || |||| Sbjct 18101 TACCGTACC 18109 >seq287 Length=17202 Score = 86.0 bits (94), Expect = 1e-11 Identities = 53/57 (93%), Gaps = 0/57 (0%) Strand=Plus/Plus Query 168754 TAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCG 168810 ||||||||||||||||||| | ||||||||||| | ||||||||||||||||||||| Sbjct 6509 TAGTATAGTGGTTAGTATCTCCGCCTGTCACGCGGAAGACCGGGGTTCAATTCCCCG 6565 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1046731689646240