Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopus_20microsporus_20var._20microsporus_20[genbank_20GCA_5F00208 3745.1_202017-04-12] 560 sequences; 24,950,816 total letters Query= NC_032111.1 Length=163005 Score E Sequences producing significant alignments: (Bits) Value seq106 215 5e-51 >seq106 Length=79482 Score = 215 bits (238), Expect = 5e-51 Identities = 467/693 (67%), Gaps = 12/693 (2%) Strand=Plus/Plus Query 23343 ATCTGCTACAAATTCAATATATTGACACATCAAATCATAGTTTATACCTATTAGTTTTAC 23402 ||| || || |||||||| |||||||||||||| || | || || || || || || Sbjct 37226 ATCAGCAACGAATTCAATGTATTGACACATCAAGGCAGAATTCATGCCAATGAGAGCAAC 37285 Query 23403 TGGAATCGCATCATATAAGAATAGTTTTTCAATGGAAACAGCATCTTTAATTATTTGAAC 23462 |||| ||||| || ||| || ||||||| ||||| || || || | | Sbjct 37286 GGGAAGAGCATCCGTCAAAAATTCTTGTTCAATGCTGACAGCTTCCAAGATGATAT---C 37342 Query 23463 AATAAC---TTCTTCACTAGGTGGATATTTTAAATACTTAAACAATAAACATGCAAAATC 23519 | || ||||| ||||| | | | | |||| || | ||| ||||| || Sbjct 37343 CTTGACGCGTTCTTGGCTAGGACGCTTACGAAGGTGGGTAAATAAAAGACAAGCAAAGTC 37402 Query 23520 ACAATGTAGGCCTTCATCCCTACTAATCAATTCATTAGAAAATGTTAATCCTGGCATTAA 23579 | ||| || |||||||| | || ||||||||||| ||||| || || ||||| || Sbjct 37403 AGTATGAAGACCTTCATCACGACAGATCAATTCATTGCTGAATGTCAAACCGGGCATCAA 37462 Query 23580 TCCTCGTTTTTTAATCCAAAATATTGCAGCAAATGATCCGGAAAAGAAAATACCCTCAAC 23639 || ||||| || | |||||| || | |||||| || || || ||||| ||||| || || Sbjct 37463 ACCACGTTTCTTGAGCCAAAAGATGGAAGCAAAGGAACCAGAGAAGAAGATACCTTCGAC 37522 Query 23640 AGCCGCAAAGGCCACAAGACGTGTACCAAATGTTGCATTATAATCAGAAATCCAtttttt 23699 ||| |||||||| ||||| || | |||| | | || | |||||||| || Sbjct 37523 AGCAGCAAAGGCAACAAGGCGCTCAGCAAAGGAACCGTTTGA---GGAAATCCACTTGAA 37579 Query 23700 tGTCCAATTAGCCTTCAATTTTACACACTCAATTGTTTCAATTGCTTTTAAGAGAAAAGT 23759 | ||||| |||||| || | ||| || || ||||| || ||||| | Sbjct 37580 GGCCCAATCAGCCTTTCTCTTGATACAAGGGATAGTGTCAATAGCAGAAAAGAGCATTTC 37639 Query 23760 TTTTTCTTCATTATCTGTTATATATGTATCAATTAGTAAACTATACATTTCAGAATGAAT 23819 ||| |||| |||||| | ||||| || ||||| | | ||| || |||| | ||||| Sbjct 37640 TTTCTCTTGGTTATCTTTGATATAAGTGTCAATCAAAAGACTGTAAGTTTCTGCGTGAAT 37699 Query 23820 ATTTTCAATAGCAATCTGAAACCCATAAAAACATCTAGCTTCAGACAATTGAACATCATT 23879 |||||||| || ||||| ||||| |||||| ||||||||| | | || |||| Sbjct 37700 GTTTTCAATCATGATTTGAAAGCCATAGAAACATTTAGCTTCAGGAATCTTGACTTCATC 37759 Query 23880 AAAAAATCTTTTAGCTAAATTTTCGTTAACAATACCATCACTAGCAGCAAAGAAAG-CAA 23938 | |||| ||| | | || ||||| |||||||| ||||| | |||||||||| | ||| Sbjct 37760 ACAAAAGTTTTGAACCAAGTTTTCATTAACAATGCCATCTGAACCAGCAAAGAAGGCCAA 37819 Query 23939 GA-AC-ATATTTTATAAAATGTCTTTCATCAGTTGATAATTTTTTCCAATCATTAATATC 23996 || || | | | | ||| || | || || | |||| |||||||| || ||| Sbjct 37820 GACACGAGAGATAAAGAAACGTTCATTTTCGGTCATTTTGTTTTCCCAATCATGAAGATC 37879 Query 23997 TTTTGATAAATCAACTTCATCAACTGTCCAAAA 24029 || ||||| | ||| ||| |||||||||| Sbjct 37880 CTTGCTCAAATCGATTTCTTCAGCTGTCCAAAA 37912 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 521484349584000