Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopus_20oryzae_20[genbank_20GCA_5F000697195.1_202014-06-02] 4,566 sequences; 42,900,422 total letters Query= NC_001348.1 Length=124884 Score E Sequences producing significant alignments: (Bits) Value seq2418 120 2e-22 >seq2418 Length=25572 Score = 120 bits (132), Expect = 2e-22 Identities = 296/450 (66%), Gaps = 23/450 (5%) Strand=Plus/Minus Query 18789 GGGGACCTTGGCCCCATTTACGGCTTCCAGTGGAGACATTTTGGAGCGGAATATAAAGAC 18848 || || ||||| || | || || |||||||||||||| |||||||| | || || Sbjct 14333 GGTGATCTTGGTCCAGTCTATGGGTTCCAGTGGAGACACTTTGGAGCCAAGTACGTTGAT 14274 Query 18849 TGTCAATCAAACTATTTACAGCAAGGAATCGATCAGCTGCAAACTGTTATAGATACAATT 18908 ||| | | ||||| ||||| || |||||| | || || |||||||| ||| Sbjct 14273 TGTGATACTGACTATAGTGGTCAAGGCATTGATCAGTTACAGCAAGTGATAGATACCATT 14214 Query 18909 AAAACAAACCCAGAAAGCCGACGAATGATTATATCGTCTTGGAATCCAAAGGATATCCCC 18968 |||| || ||| | ||||||| ||| | || |||||||||| ||||| || Sbjct 14213 AAAAATAATCCAACAGATAGACGAATTATTCTCTCTGCTTGGAATCCTGCAGATATTCCT 14154 Query 18969 TTAATGGTACTACCTCCATGTCACACGTTATGTCAGTTTTACGT------------TGCA 19016 |||||| ||||||| ||||| | || ||||||||||| || | || Sbjct 14153 ATAATGGCTTTACCTCCTTGTCATGCTTTTTGTCAGTTTTATGTTTCCAATCCGCCTTCA 14094 Query 19017 AACGGTG---------AATTATCCTGCCAAGTATACCAGAGATCGGGGGATATGGGCCTT 19067 | |||| || |||| || | || ||| |||| | |||||||| | Sbjct 14093 GATGGTGGACGTGCTAAACTATCTTGTGTGCTTTATCAGCGATCTTGCGATATGGGGTTA 14034 Query 19068 GGGGTACCGTTCAACATTGCTGGATATGCACTTCTTACCTACATAGTAGCGCATGTTACA 19127 || ||||| || || |||||| ||||| || | || ||| | || || || ||| Sbjct 14033 GGTGTACCTTTTAATATTGCTTCCTATGCGCTCTTGACTCGCATGATTGCACACGTAACA 13974 Query 19128 GGACTTAAAACC-GGAGATTTAATTCATACAATGGGGGATGCACATATTTACTTGAATCA 19186 || || | || ||||| || || ||||| ||||| ||| ||||| ||||| | |||| Sbjct 13973 -GATTTGGATCCTGGAGAATTTATACATACTATGGGTGATACACATGTTTACATTGATCA 13915 Query 19187 TATAGATGCTTTAAAAGTGCAGCTAGCTCG 19216 | ||||| || ||| ||| |||| || Sbjct 13914 CTTGGATGCATTGAAACAGCAAGTAGCACG 13885 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 399481768351470