Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopus_20oryzae_20[genbank_20GCA_5F000697195.1_202014-06-02] 4,566 sequences; 42,900,422 total letters Query= NC_001350.1 Length=112930 Score E Sequences producing significant alignments: (Bits) Value seq2418 208 6e-49 >seq2418 Length=25572 Score = 208 bits (230), Expect = 6e-49 Identities = 508/766 (66%), Gaps = 29/766 (4%) Strand=Plus/Plus Query 101524 TTATTTTTCTTAAACAGCCATATGCATTTTAATTATAGGGTGTGGGTTATAGTTTTCTAA 101583 ||||| || ||||||| ||| | ||| | |||| | | | || ||||| ||||| || Sbjct 13746 TTATTATTTCTAAACAGACATTTTCATGTCAATTTTGCTGAGAGGATTATAATTTTCCAA 13805 Query 101584 TATAATGTCATCTGCTTTAAAGTCATCAATGCATGAAACATTTCTAGCAAATCTAAGTGT 101643 || || || || ||| |||||||| || | || || | | | || ||||| Sbjct 13806 TACAAAATCTTCAAATTTGAAGTCATCTATAGAGTCAATTTTACGATTGATCCTTAGTGT 13865 Query 101644 TGGAAACGGTCTAGGAGTTCGCGT-CAACT-GCATTTTAAGAGCATCAATGTGATCTACA 101701 ||| || | ||||| |||||| | ||| || ||| | ||||| | |||||| | Sbjct 13866 TGGGAAAGACCTAGGC--TCGCGTGCTACTTGCTGTTTCAATGCATCCAAGTGATCAATG 13923 Query 101702 TAGATGTGAGCATCTCCTATAGTATGGATAAACTCTCCAGGCACTAGATTAGTGACATGA 101761 || | || | ||| || |||||||| ||||| |||||||| | | || || || || Sbjct 13924 TAAACATGTGTATCACCCATAGTATGTATAAATTCTCCAGGATCCAAATCTGTTACGTGT 13983 Query 101762 GCAATCATGCAAGTTAAAAGAGAATAGCTAGCAATGTTAAATGGCACTCCTAACCCCATA 101821 |||||||||| ||| || || | |||| |||||| ||||| || || |||||||||||| Sbjct 13984 GCAATCATGCGAGTCAAGAGCGCATAGGAAGCAATATTAAAAGGTACACCTAACCCCATA 14043 Query 101822 TCAGCTGATCTTTGATACAGTTGACAGGAAAGCTT------TCCATCA------------ 101863 || |||| ||||| || ||| || || || |||| || Sbjct 14044 TCGCAAGATCGCTGATAAAGCACACAAGATAGTTTAGCACGTCCACCATCTGAAGGCGGA 14103 Query 101864 ---CAGACATAAAATTGACTTAATACATGACAAGGCGGCAACACCATTTTAGGAATGTCT 101920 | |||||||| |||| || |||||||||| || || ||||| ||||||| ||| Sbjct 14104 TTGGAAACATAAAACTGACAAAAAGCATGACAAGGAGGTAAAGCCATTATAGGAATATCT 14163 Query 101921 GAAACATTCCAAGCACACATTAACATCCTTCTATCTGTAGGGTTTGTTTTTATAGTATCA 101980 | | |||||||||| | | | || | ||||||||| || || |||| || ||||| Sbjct 14164 GCAGGATTCCAAGCAGAGAGAATAATTCGTCTATCTGTTGGATTATTTTTAATGGTATCT 14223 Query 101981 ATCAACTGTTTTAATTGGTCAACTCCTTCTCCTTTATAATCGCGCCCAACACCTTTATAT 102040 |||| || | ||| || |||| |||| || |||| || || | | || Sbjct 14224 ATCACTTGCTGTAACTGATCAATGCCTTGACCACTATAGTCAGTATCACAATCAACGTAC 14283 Query 102041 TCTGCTCCGAAATGCCTCCACTGAAATCCATACACAGGTCCAAGATCTCCTTCATCTCTG 102100 | ||||| || || |||||||| || ||||| || || |||||||| ||||| | Sbjct 14284 TTGGCTCCAAAGTGTCTCCACTGGAACCCATAGACTGGACCAAGATCACCTTCTCGGCGA 14343 Query 102101 TCATAAAAACCAAGTTTATCTAAAAATGATCTAGATCCATTCGCATCCCAAATGTGCACG 102160 | | || ||| || ||||| | || | ||| || || ||||||| || | || Sbjct 14344 TGAGTAAGACCCAGCTTATCAAGGAACTCACGAGAGCCGTTGCCATCCCAGATCTTGAC- 14402 Query 102161 CCAGCTGCTGAT--AGCTCTTTGCTGTCAGTAGATCCTCTGATAAACCACAACAGTTCTT 102218 || ||| || | | ||| || |||| || |||||||||| | ||||||| Sbjct 14403 ATTGC-GCTCATTCAAGTGTTTTGAGTTAGTATCGCCCTTGATAAACCAAAGAAGTTCTT 14461 Query 102219 CAACAACACCTCTCCAAAATACTCTCTTAGTAGTTAAAAGTGGAAA 102264 | | |||||||| | ||||| | ||| || || | || ||||| Sbjct 14462 CGAGCACACCTCTAAAGAATACACGCTTTGTGGTGAGGAGAGGAAA 14507 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 361231097048066