Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopus_20oryzae_20[genbank_20GCA_5F000697195.1_202014-06-02] 4,566 sequences; 42,900,422 total letters Query= NC_001611.1 Length=185578 Score E Sequences producing significant alignments: (Bits) Value seq2389 379 2e-100 seq3946 149 7e-31 seq4556 120 4e-22 >seq2389 Length=30206 Score = 379 bits (420), Expect = 2e-100 Identities = 760/1120 (68%), Gaps = 10/1120 (1%) Strand=Plus/Plus Query 53687 ATTACAAACATGTTCAATGCAATAGATGCCAGATTACAAACGGCTACCTCATTAGCATCC 53746 |||||||| || || |||||||| |||| |||||||| || || |||| | | Sbjct 12398 ATTACAAAAGTGGGTAAAGCAATAGAAGCCAAGTTACAAACAGCAACTTCATCGGGACTT 12457 Query 53747 GCATATTGTATTATCTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAATTTTGTTGA 53806 | ||||| | || || || ||||| |||||||| || ||||| || || ||||| ||| Sbjct 12458 GTATATTCGACAATTTCCGTACAAAGGTTACTACATTTAATGGTACCCAAGTTTTGCTGA 12517 Query 53807 TTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGCGTACCAGTTTCAATCTGG 53866 || |||||| | ||||| |||||||| || || || ||||| |||| |||||| | || Sbjct 12518 TTGCTCTTTCTATTACAAGCATCCTTGTAGAGCATAAATGGATTACCGGTTTCAGTTTGT 12577 Query 53867 GATTCTATAATCGCTTTCCAGACGACACGAGCCTTTATTATAGATTTGTATCTCTT--TT 53924 | ||| | || || | ||| | | ||||| ||| | | | | ||||| || Sbjct 12578 GCTTCCAAGATAGCATACCATAACTTTTGTGCCTTAATTGTC--TCTCTCGCTCTTCCTT 12635 Query 53925 CTCTTTCGTATAGTGTATACAATCGTTCAAACTCGTCTCCCCAAACATTGTCCAATCCAG 53984 | | ||| || | ||| | ||||||| || |||||||||| | ||| |||| Sbjct 12636 CGCGTTCATAGCTTTCATAAAGAGCCACAAACTCATCACCCCAAACATCTTGCAAACCAG 12695 Query 53985 GACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGA 54044 | ||||| ||||| | | ||||| ||||| | ||||| || |||| ||| |||| Sbjct 12696 GTGCTTCATTAGGACAAAAGAGAGACCAATCTCCACCGTCCTTGACACGTTGCATGAAGA 12755 Query 54045 GATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTAT 54104 |||| || | |||||| || ||| | ||| | || ||| ||| || || || | Sbjct 12756 GATCGGGTACCCAAAGGGCATAAAACAAATCACGGGCTCTGATTTCATCCTTACCAAAGT 12815 Query 54105 TCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGTCA 54164 ||||| | | ||| | || | | ||||||| |||||| || || | || |||| | Sbjct 12816 TCTTTCTTAAATCTAAAAAGGTAAAGATATCAGCATGCCATGGCTCGAGATACATGGCAA 12875 Query 54165 TAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTC 54224 |||| || || ||||| || || ||||| | || | || |||||||| | || | Sbjct 12876 AGGCTCCTGGACGCTTGTTGCCGCCTTGATCGACATAACGTGCTGTGTTATTGAATACAC 12935 Query 54225 TCAACATTGGAATAATACCATTGGATGCACCATTGGTCCCGGAGATATAGCTTCCACTGG 54284 |||||| |||| | ||| || || |||||| || |||| |||||| |||| ||| Sbjct 12936 GCAACATGGGAAGCAAACCGTTCGAATAACCATTTGTACCGGCAATATAGGATCCATTGG 12995 Query 54285 CACGAATATTACTAATTGATAGACCTATCCCCCCTGCCATTTTAGAGATTAATGCGCATC 54344 ||||||||||| ||| ||||| || || ||||| |||| || ||| || || Sbjct 12996 CACGAATATTATGAATGTTGAGACCGATACCACCTGCAGTTTTCGAAATTTGGGCACAGA 13055 Query 54345 GTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGC 54404 |||||| || ||||||||||| || || ||| ||| ||||| | || | || || Sbjct 13056 TTTTTAATGTTTCATAGATGCCTTCAATTGAATCTTCCTTCATGGTGAGCAAGAAGCAAG 13115 Query 54405 TAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACC 54464 ||||| || ||||| || || ||||| || || |||||| || || ||||| Sbjct 13116 AGGACATCTGAGGACGAGGTGTACCGGCATTGAACAAAGTAGGACTGGCATGAGTAAAGA 13175 Query 54465 ATTTTTCAGAAAGTAGATTGTACGTCTCGATAGCTGAGTCTATATC-CCATTGATGAATT 54523 |||| || || | | ||||| |||||||| || | ||| ||||| || | || || Sbjct 13176 ATTTCTCGGACATCAAGTTGTAAGTCTCGATTGCAGCGTCAATATCTTCACCG-TGGATA 13234 Query 54524 CCTACTGCGACACGCAT--TAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTT 54581 || | ||||||||||| ||| |||| ||||| | || || ||||| || || | Sbjct 13235 CCAATGGCGACACGCATGATAAGATGT--TGAGGACGCTCGGCGGTCTTGCCGTCAATCT 13292 Query 54582 TCAGCAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTT 54641 | || | |||||| ||| | ||| || || |||||| |||||||| || |||| | Sbjct 13293 TGAGTAGATAGGATCGTTCAAGAGTCTTGAATCCAAAAAAGTTGTATTTGAAATCTCTGT 13352 Query 54642 CGTAAATAATAACTGAGTTGAGTTTATCCTTATATTTGTTAACTACATCCATGGTAATAC 54701 | |||||||| ||||||| || || | | | ||| || | ||| | Sbjct 13353 CATAAATAATGGCTGAGTTCAGACGTTCTGCGTTGTCCTGAACAACCTTATAGGTTGTTT 13412 Query 54702 TTGAAATAATCGGAGAATGTTTCCCATTTTTAGGATTGACATAGTTAAATAAATCCTTCA 54761 || || || || || || || | | || ||||| |||||||| | | ||||| | Sbjct 13413 CGGATATCATGGGGGAGTGCTTGCTTGTCTTGGGATTCACATAGTTGTAGAGATCCTCAA 13472 Query 54762 TCACTTCACTAAATAGtttttttGTTTCTTTGTGTAGATT 54801 |||||| | ||||| || |||||||| ||||||| ||| Sbjct 13473 TCACTTGAGAAAATACCTTCTTTGTTTCCTTGTGTAAATT 13512 Score = 178 bits (196), Expect = 2e-39 Identities = 536/821 (65%), Gaps = 19/821 (2%) Strand=Plus/Plus Query 52838 GTACGTAGATAGTACATTCCCGTTTTTAGACCGAGACTCCATCCGTAAAAATGCATACTT 52897 ||||| | ||| ||||| ||||| || | || ||| || || || ||||||||| Sbjct 11482 GTACGCAAATAATACATACCCGTCTTCAATCCCTTTTGCCAACCATAGAAGTGCATACTT 11541 Query 52898 GTTAGTTTGGAATAACTCGGATCTGCTATATGGATATTCATAGATTGACTTTGATCGATG 52957 || || || | | | || || || ||| ||| |||| | |||||||||||| ||| Sbjct 11542 GTCAGCTTACCAAAGTTGGGTTCAGCAATAAAGATGTTCAAACTTTGACTTTGATCAATG 11601 Query 52958 AAGGCTCCCCTGTCTGCAGCCATTTTTATGATCGTCTTTTGTGGAATTTCCCAAATAGTT 53017 |||| || | ||| || ||||| | | || || ||| | ||||||||||| ||| Sbjct 11602 TAGGCGCCACGGTCAGCGGCCATATCAACAATTGTACGTTGAGAAATTTCCCAAACAGTC 11661 Query 53018 TTATAAA-CTCGCTTAATATCTTCTGGAAG-GTTTGTA--TTCTGAATAGATCCACCATC 53073 || || | ||| || | | || |||| || ||| || |||| |||||||||||| Sbjct 11662 TTGTAGAGCTCT-TTGAGGTGTTGAGGAATTGTGGGTACATTTTGAACAGATCCACCATC 11720 Query 53074 TACCATAATCCTATTCTTGATCTCATCATTCCATAATTTTCTCTCGGTTAAAACTCTAAG 53133 |||| ||| | ||||||| ||||| ||||| | | || ||| | | ||| Sbjct 11721 GGCCATGATCATGTTCTTGACTTCATCGTTCCAGATACCCATATCAACCAAATCACGAAG 11780 Query 53134 GAGATGCGGATTAACTACTTGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACT 53193 | || || || | |||| |||| || || | || | || || |||| || Sbjct 11781 TAACCAAGGGTTGACCATTTGATATTCACCCGAGAGCACACGACGGGTATAAAAGTTGGA 11840 Query 53194 GGTATACGGTTCCACAGACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCAT 53253 || || || || | ||||||| ||||| ||||||| || || || || ||||| Sbjct 11841 AGTGTAAGGCTCAAAGCACTCATTGAAACCCAACATTTGAGAGGTGGAAGCGGTAGGCAT 11900 Query 53254 AGGTGCCACCAATAAACTATTTCTAAGACCGTATGTTCTG--ATTTTATCTTTTAGAGGT 53311 ||| || | || | ||| | | || ||| | | || || || ||||| | Sbjct 11901 AGGGGCTAATAAGAGTGAATTGCGGACGCC--ATGCTTGGCTATCTTTTCCTTTAGTGAA 11958 Query 53312 TCCCAATTCCAAAGATCCGACGGTACAACNNNNNNNNNNNNNNNTTGTAGAATACCGTT- 53370 |||| | ||||||| | || || ||||| || || || Sbjct 11959 GCCCAGTCCCAAAGAGAGGTGGGAGTCACATTCCACATGTCGTATTGTAATATGCCCTTG 12018 Query 53371 ---ACTGGCGTACGATCCTACATATGTATCGTATGGTCCTTCCTTCTCAGCTAGTTCACA 53427 || || ||| ||| |||| || || || ||||| | ||| ||||| | ||| || Sbjct 12019 GATACAGGACTAC---CCT-CATAAGTTTCATAAGGTCCGTACTTTTCAGCCAATTCGCA 12074 Query 53428 ACTCGCCTCTAATGCACCGTAATAAATGGTTTCGAAGATCTTCTTATTTAGATCTTGTGC 53487 || || || ||| ||| ||| |||||||| ||||| | |||||| | || || Sbjct 12075 TGAGGCTTCCAAGGCAGCGTGATAGATGGTTTCAAAGATTTGAATATTTAATTGTTTGGC 12134 Query 53488 TTCCAGGCTA-TCAAATGGATAATTTAAGAGAATAAACGCGTCTGCTAATCCTTGAACAC 53546 ||| ||| | ||||| || ||| |||| || || | ||| ||||||||||| |||| Sbjct 12135 TTC-AGGAGAGTCAAAGGGGTAACGTAAGGCCATGAATGTGTCGGCTAATCCTTGGACAC 12193 Query 53547 CAATACCGATAGGTCTATGTCTCTTATTAGAGATTTCAGCTTCTGGAATAGGATAATAAT 53606 | | ||||||||| | ||||||||| || || |||| ||||| | ||| ||||| | Sbjct 12194 CTAAACCGATAGGACGATGTCTCTTGTTTGATCTTTCTGCTTCAATGACAGGGTAATAGT 12253 Query 53607 TAATATCTATAATTTTATTGAGGTTTCTGACAATTACTTTG 53647 | ||||| ||||| || || | |||||| ||| || ||| Sbjct 12254 TGATATCGATAATCTTGTTCAAGTTTCTAGTAATCACCTTG 12294 >seq3946 Length=52427 Score = 149 bits (164), Expect = 7e-31 Identities = 229/324 (71%), Gaps = 7/324 (2%) Strand=Plus/Plus Query 24355 TTGTCTCTATAGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCAA 24414 |||| || |||||| || || | |||||| | | |||||| | ||| ||||||| Sbjct 26598 TTGTATCAATAGCAGAGAAAAGCATTTCTTTTTCTTCATCATCTTTTATATAGGTATCAA 26657 Query 24415 TCAAAAGACTATACATTTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAAC 24474 |||||||||| || |||| || ||||| |||||||| |||||||| || || |||| Sbjct 26658 TCAAAAGACTGTATGTTTCTGAGTGAATATTTTCAATCATGATTTGAAAGCCATAAAAAC 26717 Query 24475 ATCTAGCCTCGGTAATCTGTACTTCTATACAAAATCGTTCTG--CTAAATTTTCATTCAC 24532 || |||| || | ||| | ||||| |||||| ||| || | ||||||||||| || Sbjct 26718 ATTTAGCTTCAGGAATTTTGACTTCATCACAAAA--GTTTTGCACCAAATTTTCATTTAC 26775 Query 24533 TATTCCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCTGG 24592 || || ||| | ||||| || ||||| || | |||||| || || | Sbjct 26776 AATACCATCAGAGCTGGCAAAGAAAGCCAAAACGCGAGAAATAAAAAATCGCTCATTCTC 26835 Query 24593 TGTTAGTTTATT---CCAATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCA 24649 || | ||| || ||||||||| |||| || || ||| | |||||| ||||||| Sbjct 26836 AGTCATTTTGTTTTCCCAATCATTTTGATCTCTACTTAAATCTATTTCTTCAGCTGTCCA 26895 Query 24650 AAATGATGCCTCTGCCTTTTTATA 24673 ||| ||||| |||||||| ||||| Sbjct 26896 AAAAGATGCTTCTGCCTTCTTATA 26919 Score = 145 bits (160), Expect = 9e-30 Identities = 297/439 (68%), Gaps = 2/439 (0%) Strand=Plus/Plus Query 23846 TTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTACCTTCTAATGATATATTTTC 23905 ||| || ||| || || ||||| ||||| || || || |||| | ||| || | || Sbjct 26031 TTGATAATCAGAAACGCGCTTTTCAAAAAAGTTGGTCTTTCCTTGCAGTGAAATCATATC 26090 Query 23906 CATGAAATCGGATGGATTGGTAACATTATAGATTCTTTTAAATCCCAATTCAGAAATCAA 23965 ||| || || | ||||| || | |||| ||| | | || || | || || | Sbjct 26091 CATAAAGTCAAACGGATTCGTTGCCATATAAATTTTATCGAACCCAAGAGCAACCATAAG 26150 Query 23966 TCTATCTGCGACAAACTCCATATATGTTTTCATCATTTCACAATTCATTCCTATAAGTTT 24025 | ||| || || || || || ||| ||||| | ||||||| || || | | Sbjct 26151 ACGATCAGCAACGAATTCAATGTATTGACACATCAAAGTAGAATTCATACCAATCAATGC 26210 Query 24026 AACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATAGAGACCGCGTCTGTTATAATAGA 24085 ||| || | || | || | |||||||||||||| || || || |||||||| Sbjct 26211 AACAGGTAATGCATCGGTTAAGAATTCTTGTTCAATGCCTACAGCTTCCATTATAATATC 26270 Query 24086 TCTTACTGTTTCTTCACTCGGTGGAT-ACAATAAATGTTTAAACATCAAACATGCGAAAT 24144 | || || || || ||| | | || | | ||| |||||| | ||| ||||||| Sbjct 26271 CTTCACACGTTGTTGGCTAGGTTGTTTACGA-ATATGAGTAAACAAAAGACAAGCGAAAT 26329 Query 24145 CGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATTA 24204 || || ||||| ||||| | || ||| ||||| || ||| || | |||||||| | Sbjct 26330 CGGTATGAAGACCTTCGTCACGACAAATCAATTCATTACTAAAAGTCAAACCGGGCATCA 26389 Query 24205 GGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCCTTCTA 24264 ||||| || ||||||||||| || || |||||||| || |||||||| || ||||||| Sbjct 26390 AACCACGTTTCTTAAGCCAAAAAATAGAAGCAAATGAGCCGGAAAAGAATATACCTTCTA 26449 Query 24265 CTGCCGCAAAGGCAATAAG 24283 |||| ||||| |||| ||| Sbjct 26450 CTGCAGCAAAAGCAACAAG 26468 >seq4556 Length=51470 Score = 120 bits (132), Expect = 4e-22 Identities = 219/320 (68%), Gaps = 3/320 (1%) Strand=Plus/Plus Query 24357 GTCTCTATAGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCAATC 24416 || || |||||| |||||| | ||||| | ||||||||| || ||||||||| Sbjct 10143 GTATCGATAGCAGAAAAGAGCATTTCCTTTTCTTGGTTATCTTTAATGTAGGTATCAATC 10202 Query 24417 AAAAGACTATACATTTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAACAT 24476 || ||||| || |||| | ||||||||||||||| || || || || || |||||| Sbjct 10203 AAGAGACTGTAAGTTTCAGCATGAATGTTTTCAATCATGATCTGGAAACCATAAAAACAT 10262 Query 24477 CTAGCCTCGGTAATCTGTACTTCTATACAAAATCGTTCTGCTAAATTTTCATTCACTATT 24536 | || |||| ||||| ||||| |||||| || | | || || |||||||| || Sbjct 10263 TTGGCTTCGGGAATCTTGACTTCATCACAAAAGTTTTGTACCAAGTTCTCATTCACGATA 10322 Query 24537 CCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCTGGTGTT 24596 || || | | ||||| || ||||| ||| | ||||| | ||||| | | Sbjct 10323 CCATCTGAGCCAGCAAAGAAGGCCAAGACACGAGAGATAAAGAAACGTTCGTTTTCAGAC 10382 Query 24597 AGTTTATT---CCAATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAAT 24653 | |||||| ||| |||| ||| || | || | ||||| | |||||||| Sbjct 10383 ATTTTATTTTCCCAGTCATGCTGATCCTTGCTCAAGTCAATCTCTTCTGCGGTCCAAAAG 10442 Query 24654 GATGCCTCTGCCTTTTTATA 24673 || || |||||||||||||| Sbjct 10443 GAAGCTTCTGCCTTTTTATA 10462 Score = 111 bits (122), Expect = 2e-19 Identities = 286/433 (66%), Gaps = 2/433 (0%) Strand=Plus/Plus Query 23846 TTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTACCTTCTAATGATATATTTTC 23905 ||| || ||| ||||| ||||| ||||| || || || |||| | || || | || Sbjct 9583 TTGATAATCAGAAACACGCTTTTCAAAAAAGTTGGTCTTGCCTTGAAGGGAGATCATGTC 9642 Query 23906 CATGAAATCGGATGGATTGGTAACATTATAGATTCTTTTAAATCCCAATTCAGAAATCAA 23965 ||| || ||| |||| || ||| |||| || || | | ||||| | | || | Sbjct 9643 CATAAAGTCGAATGGGTTAGTAGCATTGTAAATCTTGTCGAATCCAAGAGCGACCATGAG 9702 Query 23966 TCTATCTGCGACAAACTCCATATATGTTTTCATCATTTCACAATTCATTCCTATAAGTTT 24025 | ||| ||||| || || ||||| ||||| | ||||| || || | | Sbjct 9703 ACGATCAGCGACGAATTCGATATACTGACACATCAAGGTAGCGTTCATACCGATCAATGC 9762 Query 24026 AACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATAGAGACCGCGTCTGTTATAATAGA 24085 ||| || ||||| | | || ||||||||||| ||| ||| || ||| || || | Sbjct 9763 AACAGGCAGAGCATCCGACAGGAATTCTTGTTCGATACCGACGGCTTCTACAATGAT-GT 9821 Query 24086 TCTT-ACTGTTTCTTCACTCGGTGGATACAATAAATGTTTAAACATCAAACATGCGAAAT 24144 ||| || || || ||| ||| | | | || | |||| | ||| || || | Sbjct 9822 CCTTGACGCGTTGTTGACTGGGTTGTTTACGGATGTGGGTGAACAAGAGACAGGCAAAGT 9881 Query 24145 CGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATTA 24204 | ||| ||||| || || | || || ||||| || ||| || | |||||||| | Sbjct 9882 CAGTGTGAAGACCTTCATCACGACAGATCAATTCATTACTAAAGGTCAAACCGGGCATCA 9941 Query 24205 GGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCCTTCTA 24264 ||||| || || | |||||| ||||| || ||||| ||||||||||| || ||||| | Sbjct 9942 AACCACGTTTCTTTAACCAAAAGATGGAGGCGAATGAGCCAGAAAAGAAGATGCCTTCGA 10001 Query 24265 CTGCCGCAAAGGC 24277 | || |||||||| Sbjct 10002 CAGCGGCAAAGGC 10014 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 593687713339680