Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopus_20oryzae_20[genbank_20GCA_5F000697195.1_202014-06-02] 4,566 sequences; 42,900,422 total letters Query= NC_001987.1 Length=108409 Score E Sequences producing significant alignments: (Bits) Value seq2418 215 4e-51 >seq2418 Length=25572 Score = 215 bits (238), Expect = 4e-51 Identities = 488/731 (67%), Gaps = 41/731 (6%) Strand=Plus/Plus Query 96930 AGGGTTATAGTTTTCCAGAATAATGTCATTTGCTTTAAAATCATCAATAGATGCAATCTT 96989 ||| ||||| ||||||| | || || | ||| || ||||| ||||| |||| || Sbjct 13788 AGGATTATAATTTTCCAATACAAAATCTTCAAATTTGAAGTCATCTATAGAGTCAATTTT 13847 Query 96990 TCTGGCAAACTTTAGTGTTGGGAAAGGCCTGGGAGTTCGCGTA--AGCTGCTCTGTGAGA 97047 | | | ||||||||||||||| ||| || |||||| | |||| | | | Sbjct 13848 ACGATTGATCCTTAGTGTTGGGAAAGACCTAGGC--TCGCGTGCTACTTGCTGTTTCAAT 13905 Query 97048 GCATCAATGTGATTCACATAAATGTGAGCATCTCCTAAAGTGTGAATAAATTCTCCAGGA 97107 ||||| | ||||| | |||| || | ||| || | ||| || ||||||||||||||| Sbjct 13906 GCATCCAAGTGATCAATGTAAACATGTGTATCACCCATAGTATGTATAAATTCTCCAGGA 13965 Query 97108 ACTAAATCAGTGACATGGGCGATCATACAAGTTAATAGAGAATAGCTAGCAATGTTAAAA 97167 | ||||| || || || || ||||| | ||| || || | |||| |||||| |||||| Sbjct 13966 TCCAAATCTGTTACGTGTGCAATCATGCGAGTCAAGAGCGCATAGGAAGCAATATTAAAA 14025 Query 97168 GGCACCCCTAGTCCCATATCAGCTGATCTTTGATATAACTGACAGGAAAGCTT------T 97221 || || |||| |||||||| |||| ||||| | | ||| || || || | Sbjct 14026 GGTACACCTAACCCCATATCGCAAGATCGCTGATAAAGCACACAAGATAGTTTAGCACGT 14085 Query 97222 CCATCAC---------------ACACATAAAACTGACTCAATACATGACAGGGGGGCAAC 97266 ||| || | ||||||||||||| || ||||||| || || || Sbjct 14086 CCACCATCTGAAGGCGGATTGGAAACATAAAACTGACAAAAAGCATGACAAGGAGGTAAA 14145 Query 97267 GCCATTTTTGGAACATCTAAGACATTCCAAGCACACATCAACATTCTTCTATCGGTTGGG 97326 |||||| | |||| |||| |||||||||| | | | |||| |||||| ||||| Sbjct 14146 GCCATTATAGGAATATCTGCAGGATTCCAAGCAGAGAGAATAATTCGTCTATCTGTTGGA 14205 Query 97327 TTTGTGTGTATGGTATTAATTATCTGCTTTAATTGATCAACGCCTTCTCCACCATAATTG 97386 || | | ||||||| || | |||| ||| ||||||| ||||| |||| ||| | Sbjct 14206 TTATTTTTAATGGTATCTATCACTTGCTGTAACTGATCAATGCCTTGACCACTATA---G 14262 Query 97387 TGCTTAAGACCTTGA---TATTCTGCTCCAAAATGCCTCCATTGGAATCCATAAACAGGT 97443 | || || | | || | |||||||| || ||||| ||||| ||||| || || Sbjct 14263 TCAGTATCACAATCAACGTACTTGGCTCCAAAGTGTCTCCACTGGAACCCATAGACTGGA 14322 Query 97444 CCAAGGTCTCCTTCTTCTCTATCACAGAAACCAAGCTTATCTAAATAGGACCT----AGA 97499 ||||| || |||||| | || | | ||| |||||||| |||| || ||| Sbjct 14323 CCAAGATCACCTTCTCGGCGATGAGTAAGACCCAGCTTATC----AAGGAACTCACGAGA 14378 Query 97500 TCCATTTGCATCCCAAATGTGCACA-CCAGATGCTGCAAGCTCTTTGCTGTCAGTAGATC 97558 || || ||||||| || | ||| | | | |||| | ||| || |||| | Sbjct 14379 GCCGTTGCCATCCCAGATCTTGACATTGCGCTCATTCAAG-TGTTTTGAGTTAGTATCGC 14437 Query 97559 CTCTGATAAACCACAACAATTCTTCCACAACACCTCTCCAAAATACTCTCTTAGTTGTTA 97618 | |||||||||| | | |||||| | |||||||| | ||||| | ||| || || | Sbjct 14438 CCTTGATAAACCAAAGAAGTTCTTCGAGCACACCTCTAAAGAATACACGCTTTGTGGTGA 14497 Query 97619 AGAGAGGAAAA 97629 |||||||||| Sbjct 14498 GGAGAGGAAAA 14508 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 346764702120620