Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopus_20oryzae_20[genbank_20GCA_5F000697195.1_202014-06-02] 4,566 sequences; 42,900,422 total letters Query= NC_002169.1 Length=135611 Score E Sequences producing significant alignments: (Bits) Value seq2614 134 1e-26 seq1352 125 6e-24 seq4556 114 1e-20 seq3863 109 5e-19 seq2553 100 2e-16 seq2484 86.0 5e-12 >seq2614 Length=127402 Score = 134 bits (148), Expect = 1e-26 Identities = 155/209 (74%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589 |||||||||| || || || ||||||||||||||||| |||| ||| || ||| ||| Sbjct 59165 ACCAAGTGGAGAGTGGATTCCTTTTGAATGTTGTAATCACTCAAAGTACGACCATCTTCG 59106 Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTA 118649 ||||| || ||||| |||| | ||| |||||||| ||||| || || ||||||||| | Sbjct 59105 AGCTGCTTACCAGCAAAGATCAAACGTTGCTGATCAGGAGGAATACCTTCCTTGTCTTGA 59046 Query 118650 ATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTG 118709 || ||||| || || | || | | || | ||||| || | ||| | ||||| Sbjct 59045 ATCTTTTGCTTGACGTTCTCAATACTATCAGAAGATTCGACTTCCAAGGTAATGGTTTTA 58986 Query 118710 CCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 || || || ||||| || ||||||||||| Sbjct 58985 CCAGTAAGGGTTTTGACGAAAATCTGCAT 58957 Score = 104 bits (114), Expect = 2e-17 Identities = 149/210 (71%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589 |||||||||| || || || |||||||||||||| || | || || ||| ||| Sbjct 58937 ACCAAGTGGAGAGTGGATTCCTTTTGAATGTTGTAGTCTGAAAGGGTACGACCATCTTCG 58878 Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTA 118649 || ||||| ||||| | |||||||| || || || ||||| || || ||||||||| Sbjct 58877 AGTTGTTTACCAGCAAAAATGAGACGTTGTTGGTCTGGAGGAATACCTTCCTTGTCTTGG 58818 Query 118650 ATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTG 118709 || ||||| || || | ||||| | | || | ||||| || | || | || || Sbjct 58817 ATCTTTTGCTTTACATTTTCGATGCTATCAGAAGATTCGACTTCTAAAGTGATAGTCTTT 58758 Query 118710 CCGGTCAGAGTTTTTACAAAAATCTGCATG 118739 || || || || |||||||| || |||||| Sbjct 58757 CCTGTAAGGGTCTTTACAAAGATTTGCATG 58728 Score = 93.3 bits (102), Expect = 4e-14 Identities = 146/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589 |||||||| | || || ||||||||||||||||| || | || || ||| || Sbjct 59393 ACCAAGTGAAGAGTGGATTCTTTTTGAATGTTGTAGTCTGAAAGGGTACGGCCATCTTCT 59334 Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTA 118649 | ||||| ||||| |||| | ||| || || || ||||| || || ||||||||| | Sbjct 59333 AATTGTTTACCAGCAAAGATCAAACGTTGTTGGTCAGGAGGAATCCCTTCCTTGTCTTGA 59274 Query 118650 ATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTG 118709 || ||||| || || | ||| | | || | ||| || || | || | ||||| Sbjct 59273 ATCTTTTGCTTTACATTTTCAATACTATCAGAAGACTCAACTTCTAAAGTGATGGTTTTA 59214 Query 118710 CCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 || || || ||||| || ||||||||||| Sbjct 59213 CCAGTAAGGGTTTTGACGAAAATCTGCAT 59185 >seq1352 Length=65141 Score = 125 bits (138), Expect = 6e-24 Identities = 153/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589 |||||||||| || || || ||||| |||||||| || |||| |||||| || || Sbjct 15542 ACCAAGTGGAGAGTGGATTCCTTTTGGATGTTGTAGTCACTCAAAGTGCGACCGTCTTCC 15601 Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTA 118649 | ||||| |||||| | |||||||| |||||||| ||||| ||||||||||| ||| | Sbjct 15602 AATTGTTTACCAGCGAAAATGAGACGTTGCTGATCAGGAGGAATGCCCTCCTTATCTTGA 15661 Query 118650 ATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTG 118709 || ||||| || || | || | | | || | |||||| || | || | || || Sbjct 15662 ATCTTTTGCTTGACATTCTCAATGCTATCAGAAGACTCGACTTCCAAAGTGATGGTCTTA 15721 Query 118710 CCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 || |||| ||| || || ||||| ||||| Sbjct 15722 CCAGTCAAAGTCTTGACGAAAATTTGCAT 15750 Score = 125 bits (138), Expect = 6e-24 Identities = 153/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589 |||||||||| || || || ||||| |||||||| || |||| |||||| || || Sbjct 15998 ACCAAGTGGAGAGTGGATTCCTTTTGGATGTTGTAGTCACTCAAAGTGCGACCGTCTTCC 16057 Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTA 118649 | ||||| |||||| | |||||||| |||||||| ||||| ||||||||||| ||| | Sbjct 16058 AATTGTTTACCAGCGAAAATGAGACGTTGCTGATCAGGAGGAATGCCCTCCTTATCTTGA 16117 Query 118650 ATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTG 118709 || ||||| || || | || | | | || | |||||| || | || | || || Sbjct 16118 ATCTTTTGCTTGACATTCTCAATGCTATCAGAAGACTCGACTTCCAAAGTGATGGTCTTA 16177 Query 118710 CCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 || |||| ||| || || ||||| ||||| Sbjct 16178 CCAGTCAAAGTCTTGACGAAAATTTGCAT 16206 Score = 125 bits (138), Expect = 6e-24 Identities = 153/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589 |||||||||| ||||| || |||||||||||||| || | ||||| ||| || Sbjct 16226 ACCAAGTGGAGAGTAGATTCCTTTTGAATGTTGTAGTCTGAAAGGGTGCGGCCATCTTCA 16285 Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTA 118649 ||||| || ||||| |||| | ||| || ||||| ||||| || || ||||||||| Sbjct 16286 AGCTGCTTACCAGCAAAGATCAAACGTTGTTGATCAGGAGGGATACCTTCCTTGTCTTGG 16345 Query 118650 ATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTG 118709 |||||||| || || | ||||| | | || | | |||||||| | || | || ||| Sbjct 16346 ATTTTTTGCTTGACGTTTTCGATGCTATCAGAGGATTCGACCTCCAAAGTGATGGTCTTG 16405 Query 118710 CCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 || || || ||||| ||||| || ||||| Sbjct 16406 CCAGTAAGTGTTTTAACAAAGATTTGCAT 16434 Score = 116 bits (128), Expect = 3e-21 Identities = 151/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589 |||||||||| ||||| || ||||||||||| || || | ||||| ||| || Sbjct 15314 ACCAAGTGGAGAGTAGATTCCTTTTGAATGTTATAGTCTGAAAGGGTGCGGCCATCTTCA 15373 Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTA 118649 ||||| || ||||| |||| | |||||| ||||| ||||| ||||||||||||||| | Sbjct 15374 AGCTGCTTACCAGCAAAGATCAAACGCTGTTGATCAGGAGGAATGCCCTCCTTGTCTTGA 15433 Query 118650 ATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTG 118709 || ||||| || || | || | | || | ||| || || | || | ||||| Sbjct 15434 ATCTTTTGCTTGACATTCTCAATACTATCAGAAGACTCAACTTCCAAAGTGATGGTTTTA 15493 Query 118710 CCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 || |||| ||| || |||||||| ||||| Sbjct 15494 CCAGTCAAAGTCTTGACAAAAATTTGCAT 15522 Score = 116 bits (128), Expect = 3e-21 Identities = 151/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589 |||||||||| ||||| || ||||||||||| || || | ||||| ||| || Sbjct 15770 ACCAAGTGGAGAGTAGATTCCTTTTGAATGTTATAGTCTGAAAGGGTGCGGCCATCTTCA 15829 Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTA 118649 ||||| || ||||| |||| | |||||| ||||| ||||| ||||||||||||||| | Sbjct 15830 AGCTGCTTACCAGCAAAGATCAAACGCTGTTGATCAGGAGGAATGCCCTCCTTGTCTTGA 15889 Query 118650 ATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTG 118709 || ||||| || || | || | | || | ||| || || | || | ||||| Sbjct 15890 ATCTTTTGCTTGACATTCTCAATACTATCAGAAGACTCAACTTCCAAAGTGATGGTTTTA 15949 Query 118710 CCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 || |||| ||| || |||||||| ||||| Sbjct 15950 CCAGTCAAAGTCTTGACAAAAATTTGCAT 15978 >seq4556 Length=51470 Score = 114 bits (126), Expect = 1e-20 Identities = 297/447 (66%), Gaps = 17/447 (4%) Strand=Plus/Minus Query 44849 TTGGCCGAACGATTGGTCGCATTCGCCATTGTCGAAGGAGTGTTCTTTTCGGGGAGTTTT 44908 || || ||||| ||||||| || ||| ||||||||| | |||||||| || || Sbjct 10032 TTTGCTGAACGTCTGGTCGCCTTTGCCGCTGTCGAAGGCATCTTCTTTTCTGGCTCATTC 9973 Query 44909 GCGGCGATATTTTACATGAAAACCAAGGGAGTGATGCCCGGACTGACGTTTAGCAACGAA 44968 || | || |||| | || | || |||||||||| |||| ||||| || ||| Sbjct 9972 GCCTCCATCTTTTGGTTAAAGAAACGTGGTTTGATGCCCGGTTTGACCTTTAGTAATGAA 9913 Query 44969 TTGATTTCGAGAGACGAAGGTCTGCACACCAACTTTGCCTGCCTCTACTATAATACGAGA 45028 ||||| | | || |||||||| ||||| |||||||||| |||| | | | | | Sbjct 9912 TTGATCTGTCGTGATGAAGGTCTTCACACTGACTTTGCCTGTCTCTTGTTCAC--CCACA 9855 Query 45029 GTCGATCAAAAGTTGGACGC-GCCCAC----CGTCAACGACATGTTCTCCGAAGCCGTGG 45083 || | || | || | | | || |||||| ||||| | |||||||| | Sbjct 9854 TCCG-TAAACA-----ACCCAGTCAACAACGCGTCAAGGACATCATTGTAGAAGCCGTCG 9801 Query 45084 CCATCGAGATGGAATTTTTTGCTGAGGCTCTGCCCGAATCGTTGGTGGGAATGAACGCGA 45143 ||||| ||||| | | || |||||||| | | ||| | || |||||||| | Sbjct 9800 GTATCGAACAAGAATTCCTGTCGGATGCTCTGCCTGTTGCATTGATCGGTATGAACGCTA 9741 Query 45144 ATATGATGAGAAAGTACATTGAGTTTGTCGCCGATCGTCTTCTCGTCCAGTTAAAGTATC 45203 ||||| | |||| || || || ||||| |||||||| | ||| | | | || Sbjct 9740 CCTTGATGTGTCAGTATATCGAATTCGTCGCTGATCGTCTCATGGTC--GCTCTTGGATT 9683 Query 45204 C--CAAGATGTACTATACTGAGAACCCATTCGAGTTTATGAACAATATTTCGTTGGAGGG 45261 | |||||| ||| || || ||||||||||| |||||| ||| || || | | || Sbjct 9682 CGACAAGATTTACAATGCTACTAACCCATTCGACTTTATGGACATGATCTCCCTTCAAGG 9623 Query 45262 CAAAACTAAtttttttGAGAAACGCGT 45288 ||| || || |||||||| || || || Sbjct 9622 CAAGACCAACTTTTTTGAAAAGCGTGT 9596 >seq3863 Length=144211 Score = 109 bits (120), Expect = 5e-19 Identities = 117/155 (75%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589 |||||||| | ||||| || |||||||||||||| || |||| ||||| ||| || Sbjct 119968 ACCAAGTGAAGAGTAGATTCCTTTTGAATGTTGTAGTCACTCAAGGTGCGACCATCTTCC 120027 Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTA 118649 | ||||| || ||| | |||||||| || ||||| ||||| || || ||||||||| | Sbjct 120028 AATTGTTTACCGGCGAAAATGAGACGTTGTTGATCAGGAGGAATACCTTCCTTGTCTTGA 120087 Query 118650 ATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCT 118684 || ||||| || || | || | |||||| | ||| Sbjct 120088 ATCTTTTGCTTGACATTGTCAATGGTGTCAGAGCT 120122 >seq2553 Length=14598 Score = 100 bits (110), Expect = 2e-16 Identities = 115/155 (74%), Gaps = 0/155 (0%) Strand=Plus/Minus Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589 |||||||| | || || || |||||||||||||| ||||||| ||| || || || Sbjct 8203 ACCAAGTGAAGGGTGGATTCCTTTTGAATGTTGTAGTCGCTCAAAGTACGACCGTCTTCT 8144 Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTA 118649 | ||||| || ||| | |||||||| || || || ||||| || || ||||||||| | Sbjct 8143 AATTGTTTACCGGCGAAAATGAGACGTTGTTGGTCAGGAGGAATACCTTCCTTGTCTTGA 8084 Query 118650 ATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCT 118684 || ||||| || || | || | |||||| | ||| Sbjct 8083 ATCTTTTGCTTGACATTGTCAATGGTGTCAGAGCT 8049 >seq2484 Length=156414 Score = 86.0 bits (94), Expect = 5e-12 Identities = 147/209 (70%), Gaps = 6/209 (3%) Strand=Plus/Plus Query 132908 GGGTTTTGTGCGCAAATAATACATGCCCGTTTTCAGTTTTTTCTCCCACGCGTAAAAGTG 132967 ||| ||||| | |||||| | |||||| ||||||| |||| ||| || ||||| || Sbjct 17664 GGGGTTTGTTCTCAAATATTGCATGCCTGTTTTCAAACCCTTCTTCCAAGCATAAAAATG 17723 Query 132968 TATGCTCGACA--CCACCGAGTAAGTGGGTTCGGCGACAAATAAATTCAGCGATTGACTC 133025 || || | | |||| ||| | ||||| || ||| | ||| || |||||| Sbjct 17724 CATAGAAGAAAGACGACCG--TAATTAGGTTCAGCAGAAAACAGATTAAGAGATTGAGAT 17781 Query 133026 TGATCTATGAAAGGAGCACGGTCGGCGGCCATGTTTATTAT-ACACTTTGATTTGATCTC 133084 || |||||||||||||||||||| || || | | || | |||| ||| ||| || Sbjct 17782 TGGTCTATGAAAGGAGCACGGTCTGCAGCTAGATCAATAGTAACACGCTGA-GGGATTTC 17840 Query 133085 CCATGCCGTCTTGAAGAGATTCTTGACAT 133113 |||||| |||||| | | ||||||| || Sbjct 17841 CCATGCGGTCTTGTACAATTTCTTGAGAT 17869 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433806258151672