Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopus_20oryzae_20[genbank_20GCA_5F000697195.1_202014-06-02] 4,566 sequences; 42,900,422 total letters Query= NC_003391.1 Length=205719 Score E Sequences producing significant alignments: (Bits) Value seq2389 379 3e-100 seq3946 159 5e-34 seq4556 125 9e-24 >seq2389 Length=30206 Score = 379 bits (420), Expect = 3e-100 Identities = 823/1225 (67%), Gaps = 10/1225 (1%) Strand=Plus/Plus Query 65718 ATTACAAACATGTTCAATGCAACAGATGCCAGATTACAAACGGCTACCTCATTAGCATCC 65777 |||||||| || || |||| ||| |||| |||||||| || || |||| | | Sbjct 12398 ATTACAAAAGTGGGTAAAGCAATAGAAGCCAAGTTACAAACAGCAACTTCATCGGGACTT 12457 Query 65778 GCATATTGTATTATCTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAATTTTGTTGA 65837 | ||||| | || || || ||||| |||||||| || ||||| || || ||||| ||| Sbjct 12458 GTATATTCGACAATTTCCGTACAAAGGTTACTACATTTAATGGTACCCAAGTTTTGCTGA 12517 Query 65838 TTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGA 65897 || |||||| | ||||| |||||||| || || || |||||| |||| |||||| | || Sbjct 12518 TTGCTCTTTCTATTACAAGCATCCTTGTAGAGCATAAATGGATTACCGGTTTCAGTTTGT 12577 Query 65898 GATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATAGATTTGTATCTCTT--TT 65955 | ||| | || || | ||| | | | ||||| ||| | | | | ||||| || Sbjct 12578 GCTTCCAAGATAGCATACCATAACTTTTGTGCCTTAATTGTC--TCTCTCGCTCTTCCTT 12635 Query 65956 CTCTTTCGTATAGTGTATACAATCGTTCGAACTCGTCTCCCCAAACATTGTCCAATCCAG 66015 | | ||| || | ||| | | ||||| || |||||||||| | ||| |||| Sbjct 12636 CGCGTTCATAGCTTTCATAAAGAGCCACAAACTCATCACCCCAAACATCTTGCAAACCAG 12695 Query 66016 GACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGA 66075 | ||||| ||||| | | ||||| ||||| | ||||| || |||| ||| |||| Sbjct 12696 GTGCTTCATTAGGACAAAAGAGAGACCAATCTCCACCGTCCTTGACACGTTGCATGAAGA 12755 Query 66076 GATCAGGAATCCAAAGAGCTATAAATAAATCTCTGGTTCTATGTTCCTCGTTTCCTGTAT 66135 |||| || | |||||| || ||| ||||| | || ||| ||| || || || | Sbjct 12756 GATCGGGTACCCAAAGGGCATAAAACAAATCACGGGCTCTGATTTCATCCTTACCAAAGT 12815 Query 66136 TCTTTTTAAGATCGAGGAACGCCATAATATCATAATGCCACGGTTCCAAGTATATGGCCA 66195 ||||| | | ||| | || | | |||||| |||||| || || | || ||||| | Sbjct 12816 TCTTTCTTAAATCTAAAAAGGTAAAGATATCAGCATGCCATGGCTCGAGATACATGGCAA 12875 Query 66196 TAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTC 66255 |||| || || ||||| || || ||||| | || | || |||||||| | || | Sbjct 12876 AGGCTCCTGGACGCTTGTTGCCGCCTTGATCGACATAACGTGCTGTGTTATTGAATACAC 12935 Query 66256 TCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCGGAGATATAGCTTCCACTTG 66315 |||||| |||| | ||| || || |||||| || |||| |||||| |||| | | Sbjct 12936 GCAACATGGGAAGCAAACCGTTCGAATAACCATTTGTACCGGCAATATAGGATCCATTGG 12995 Query 66316 CACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATC 66375 ||||||||||| ||| ||||| || || ||||| |||| || ||| || || Sbjct 12996 CACGAATATTATGAATGTTGAGACCGATACCACCTGCAGTTTTCGAAATTTGGGCACAGA 13055 Query 66376 GTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGC 66435 |||||| || ||||||||||| || || ||| ||| ||||| | || | || || Sbjct 13056 TTTTTAATGTTTCATAGATGCCTTCAATTGAATCTTCCTTCATGGTGAGCAAGAAGCAAG 13115 Query 66436 TAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACC 66495 ||||| || ||||| || || ||||| || || |||||| || || ||||| Sbjct 13116 AGGACATCTGAGGACGAGGTGTACCGGCATTGAACAAAGTAGGACTGGCATGAGTAAAGA 13175 Query 66496 ATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTATATC-CCATTGATGAATT 66554 |||| || || | | ||||| ||||| || || | ||| ||||| || | || || Sbjct 13176 ATTTCTCGGACATCAAGTTGTAAGTCTCGATTGCAGCGTCAATATCTTCACCG-TGGATA 13234 Query 66555 CCTACTGCGACACGCAT--TAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTT 66612 || | ||||||||||| ||| |||| ||||| | || || ||||| || || | Sbjct 13235 CCAATGGCGACACGCATGATAAGATGT--TGAGGACGCTCGGCGGTCTTGCCGTCAATCT 13292 Query 66613 TCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTT 66672 | | | |||||| ||| | ||| || || |||||| |||||||| || |||| | Sbjct 13293 TGAGTAGATAGGATCGTTCAAGAGTCTTGAATCCAAAAAAGTTGTATTTGAAATCTCTGT 13352 Query 66673 CGTAAATAATAACCGAGTTGAGTTTATCCTTATATTTGTTAACTACATCCATGGTAATAC 66732 | |||||||| | ||||| || || | | | ||| || | ||| | Sbjct 13353 CATAAATAATGGCTGAGTTCAGACGTTCTGCGTTGTCCTGAACAACCTTATAGGTTGTTT 13412 Query 66733 TTGAAATAATCGGAGAATGTTTCCCATTTTTAGGATTGACATAGTTGAATAAATCCTCCA 66792 || || || || || || || | | || ||||| ||||||||| | | |||||| | Sbjct 13413 CGGATATCATGGGGGAGTGCTTGCTTGTCTTGGGATTCACATAGTTGTAGAGATCCTCAA 13472 Query 66793 TCACTTCACTAAATAGtttttttGTTTCTTTGTGTAGATTTGATACGGCTATTCTAGCGG 66852 |||||| | ||||| || |||||||| ||||||| ||| | || || | ||| | Sbjct 13473 TCACTTGAGAAAATACCTTCTTTGTTTCCTTGTGTAAATTACTAATTGCAATACGAGCAG 13532 Query 66853 CTATAATGGCATAATCCGGATGTTGTGTAGTACAAGTGGCTGCTATTTCGGCTGCCAGAG 66912 | | | || || || ||||| | || || | || || |||| || || || Sbjct 13533 CCAAGAGTGCGTAGTCGGGATGACGAGTGGTCATATATGCAGCGGTTTCAGCAGCAAGGT 13592 Query 66913 TGTCCAATTCTACCGTTGTTACTCC 66937 |||| | ||| || || |||||||| Sbjct 13593 TGTCAAGTTCAACAGTAGTTACTCC 13617 Score = 168 bits (186), Expect = 9e-37 Identities = 534/821 (65%), Gaps = 19/821 (2%) Strand=Plus/Plus Query 64869 GTACGTAGATAGTACATTCCCGTTTTTAGACCGAGACTCCATCCGTAAAAATGCATACTC 64928 ||||| | ||| ||||| ||||| || | || ||| || || || |||||||| Sbjct 11482 GTACGCAAATAATACATACCCGTCTTCAATCCCTTTTGCCAACCATAGAAGTGCATACTT 11541 Query 64929 GTTAGTTTGGAATAACTCGGATCTGCTATATGGATATTCATAGATTGACTTTGATCGATG 64988 || || || | | | || || || ||| ||| |||| | |||||||||||| ||| Sbjct 11542 GTCAGCTTACCAAAGTTGGGTTCAGCAATAAAGATGTTCAAACTTTGACTTTGATCAATG 11601 Query 64989 AAGGCTCCCCTGTCTGCAGCCATTTTTATGATCGTCTTTTGTGGAATTTCCCAAATAGTT 65048 |||| || | ||| || ||||| | | || || ||| | ||||||||||| ||| Sbjct 11602 TAGGCGCCACGGTCAGCGGCCATATCAACAATTGTACGTTGAGAAATTTCCCAAACAGTC 11661 Query 65049 TTATAAA-CTCGCTTAATATCTTCTGGAAG-GTTTGTA--TTCTGAATGGATCCACCATC 65104 || || | ||| || | | || |||| || ||| || |||| ||||||||||| Sbjct 11662 TTGTAGAGCTCT-TTGAGGTGTTGAGGAATTGTGGGTACATTTTGAACAGATCCACCATC 11720 Query 65105 TGCCATAATCCTATTCTTGATCTCATCATTCCATAATTTTCTCTCGGTTAAAACTCTAAG 65164 ||||| ||| | ||||||| ||||| ||||| | | || ||| | | ||| Sbjct 11721 GGCCATGATCATGTTCTTGACTTCATCGTTCCAGATACCCATATCAACCAAATCACGAAG 11780 Query 65165 GAGATGCGGATTAACTACTTGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACT 65224 | || || || | |||| |||| || || | || | || || |||| || Sbjct 11781 TAACCAAGGGTTGACCATTTGATATTCACCCGAGAGCACACGACGGGTATAAAAGTTGGA 11840 Query 65225 GGTATACGGTTCCACAGACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCAT 65284 || || || || | ||||||| ||||| ||||||| || || || || ||||| Sbjct 11841 AGTGTAAGGCTCAAAGCACTCATTGAAACCCAACATTTGAGAGGTGGAAGCGGTAGGCAT 11900 Query 65285 AGGTGCCACCAATAAACTATTTCTAAGACCGTATGTTCTG--ATTTTATCTTTTAGAGGT 65342 ||| || | || | ||| | | || ||| | | || || || ||||| | Sbjct 11901 AGGGGCTAATAAGAGTGAATTGCGGACGCC--ATGCTTGGCTATCTTTTCCTTTAGTGAA 11958 Query 65343 TCCCAATTCCAAAGATCCGACGGTACAACNNNNNNNNNNNNNNNTTGTAGAATACCGTT- 65401 |||| | ||||||| | || || ||||| || || || Sbjct 11959 GCCCAGTCCCAAAGAGAGGTGGGAGTCACATTCCACATGTCGTATTGTAATATGCCCTTG 12018 Query 65402 ---ACTGGCGTACGATCCTACATATGTATCGTATGGTCCTTCCTTCTCAGCTAGTTCACA 65458 || || ||| ||| |||| || || || ||||| | ||| ||||| | ||| || Sbjct 12019 GATACAGGACTAC---CCT-CATAAGTTTCATAAGGTCCGTACTTTTCAGCCAATTCGCA 12074 Query 65459 ACTCGCCTCTAATGCACCGTAATAAATGGTTTCGAAGATCTTCTTATTTAGATCTTGTGC 65518 || || || ||| ||| ||| |||||||| ||||| | |||||| | || || Sbjct 12075 TGAGGCTTCCAAGGCAGCGTGATAGATGGTTTCAAAGATTTGAATATTTAATTGTTTGGC 12134 Query 65519 TTCCAGGCTA-TCAAATGGATAATTTAAGAGAATAAACGCGTCTGCTAATCCTTGAACAC 65577 ||| ||| | ||||| || ||| |||| || || | ||| ||||||||||| |||| Sbjct 12135 TTC-AGGAGAGTCAAAGGGGTAACGTAAGGCCATGAATGTGTCGGCTAATCCTTGGACAC 12193 Query 65578 CAATACCGATAGGTCTATGTCTCTTATTAGAGATTTCAGCTTCTGGAATAGGATAATAAT 65637 | | ||||||||| | ||||||||| || || |||| ||||| | ||| ||||| | Sbjct 12194 CTAAACCGATAGGACGATGTCTCTTGTTTGATCTTTCTGCTTCAATGACAGGGTAATAGT 12253 Query 65638 TAATATCTATAATTTTATTGAGATTTCTGACAATTACTTTG 65678 | ||||| ||||| || || | ||||| ||| || ||| Sbjct 12254 TGATATCGATAATCTTGTTCAAGTTTCTAGTAATCACCTTG 12294 >seq3946 Length=52427 Score = 159 bits (176), Expect = 5e-34 Identities = 304/445 (68%), Gaps = 2/445 (0%) Strand=Plus/Plus Query 35869 TTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTACCTTCTAATGATATATTTTC 35928 ||| || ||| || || ||||| ||||| || || || |||| | ||| || | || Sbjct 26031 TTGATAATCAGAAACGCGCTTTTCAAAAAAGTTGGTCTTTCCTTGCAGTGAAATCATATC 26090 Query 35929 CATGAAATCGAATGGATTGATAACATTATAAAtttttttAAATCCCAATTCAGAAATCAA 35988 ||| || || || ||||| | | |||||||||| | || || | || || | Sbjct 26091 CATAAAGTCAAACGGATTCGTTGCCATATAAATTTTATCGAACCCAAGAGCAACCATAAG 26150 Query 35989 TCTATCTGCGACAAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATAAGTTT 36048 | ||| || || ||||| || ||| ||||| | ||||||| || || | | Sbjct 26151 ACGATCAGCAACGAATTCAATGTATTGACACATCAAAGTAGAATTCATACCAATCAATGC 26210 Query 36049 AACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATAGAGACCGCGTCTGTTATAATAGA 36108 ||| || | || | || | |||||||||||||| || || || |||||||| Sbjct 26211 AACAGGTAATGCATCGGTTAAGAATTCTTGTTCAATGCCTACAGCTTCCATTATAATATC 26270 Query 36109 TATTACTGTTTCTTCACTCGGTGGAT-ACAATAAATGTTTAAACATCAAACATGCGAAAT 36167 | || || || || ||| | | || | | ||| |||||| | ||| ||||||| Sbjct 26271 CTTCACACGTTGTTGGCTAGGTTGTTTACGA-ATATGAGTAAACAAAAGACAAGCGAAAT 26329 Query 36168 CGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATTA 36227 || || ||||| ||||| | || ||| ||||| || ||| || | |||||||| | Sbjct 26330 CGGTATGAAGACCTTCGTCACGACAAATCAATTCATTACTAAAAGTCAAACCGGGCATCA 26389 Query 36228 GGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCCTTCTA 36287 ||||| || ||||||||||| || || |||||||| || |||||||| || ||||||| Sbjct 26390 AACCACGTTTCTTAAGCCAAAAAATAGAAGCAAATGAGCCGGAAAAGAATATACCTTCTA 26449 Query 36288 CTGCCGCAAAGGCAATAAGTCTCTC 36312 |||| ||||| |||| ||| | ||| Sbjct 26450 CTGCAGCAAAAGCAACAAGACGCTC 26474 Score = 154 bits (170), Expect = 2e-32 Identities = 230/324 (71%), Gaps = 7/324 (2%) Strand=Plus/Plus Query 36378 TTGTCTCTATAGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCAA 36437 |||| || |||||| || || | |||||| | | |||||| | ||| ||||||| Sbjct 26598 TTGTATCAATAGCAGAGAAAAGCATTTCTTTTTCTTCATCATCTTTTATATAGGTATCAA 26657 Query 36438 TCAAAAGACTATACATTTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAAC 36497 |||||||||| || |||| || ||||| |||||||| |||||||| || || |||| Sbjct 26658 TCAAAAGACTGTATGTTTCTGAGTGAATATTTTCAATCATGATTTGAAAGCCATAAAAAC 26717 Query 36498 ATCTAGCCTCGGTAATCTGTACTTCTGTACAAAATCGTTCTG--CTAAATTTTCATTCAC 36555 || |||| || | ||| | ||||| |||||| ||| || | ||||||||||| || Sbjct 26718 ATTTAGCTTCAGGAATTTTGACTTCATCACAAAA--GTTTTGCACCAAATTTTCATTTAC 26775 Query 36556 TATTCCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTTTGG 36615 || || ||| | ||||| || ||||| || | |||||| || || || Sbjct 26776 AATACCATCAGAGCTGGCAAAGAAAGCCAAAACGCGAGAAATAAAAAATCGCTCATTCTC 26835 Query 36616 TGTTAGTTTATT---CCAATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCA 36672 || | ||| || ||||||||| |||| || || ||| | |||||| ||||||| Sbjct 26836 AGTCATTTTGTTTTCCCAATCATTTTGATCTCTACTTAAATCTATTTCTTCAGCTGTCCA 26895 Query 36673 AAATGATGCCTCTGCCTTTTTATA 36696 ||| ||||| |||||||| ||||| Sbjct 26896 AAAAGATGCTTCTGCCTTCTTATA 26919 >seq4556 Length=51470 Score = 125 bits (138), Expect = 9e-24 Identities = 220/320 (69%), Gaps = 3/320 (1%) Strand=Plus/Plus Query 36380 GTCTCTATAGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCAATC 36439 || || |||||| |||||| | ||||| | ||||||||| || ||||||||| Sbjct 10143 GTATCGATAGCAGAAAAGAGCATTTCCTTTTCTTGGTTATCTTTAATGTAGGTATCAATC 10202 Query 36440 AAAAGACTATACATTTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAACAT 36499 || ||||| || |||| | ||||||||||||||| || || || || || |||||| Sbjct 10203 AAGAGACTGTAAGTTTCAGCATGAATGTTTTCAATCATGATCTGGAAACCATAAAAACAT 10262 Query 36500 CTAGCCTCGGTAATCTGTACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATT 36559 | || |||| ||||| ||||| |||||| || | | || || |||||||| || Sbjct 10263 TTGGCTTCGGGAATCTTGACTTCATCACAAAAGTTTTGTACCAAGTTCTCATTCACGATA 10322 Query 36560 CCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTTTGGTGTT 36619 || || | | ||||| || ||||| ||| | ||||| | ||||||| | Sbjct 10323 CCATCTGAGCCAGCAAAGAAGGCCAAGACACGAGAGATAAAGAAACGTTCGTTTTCAGAC 10382 Query 36620 AGTTTATT---CCAATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAAT 36676 | |||||| ||| |||| ||| || | || | ||||| | |||||||| Sbjct 10383 ATTTTATTTTCCCAGTCATGCTGATCCTTGCTCAAGTCAATCTCTTCTGCGGTCCAAAAG 10442 Query 36677 GATGCCTCTGCCTTTTTATA 36696 || || |||||||||||||| Sbjct 10443 GAAGCTTCTGCCTTTTTATA 10462 Score = 122 bits (134), Expect = 1e-22 Identities = 286/432 (66%), Gaps = 0/432 (0%) Strand=Plus/Plus Query 35869 TTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTACCTTCTAATGATATATTTTC 35928 ||| || ||| ||||| ||||| ||||| || || || |||| | || || | || Sbjct 9583 TTGATAATCAGAAACACGCTTTTCAAAAAAGTTGGTCTTGCCTTGAAGGGAGATCATGTC 9642 Query 35929 CATGAAATCGAATGGATTGATAACATTATAAAtttttttAAATCCCAATTCAGAAATCAA 35988 ||| || |||||||| || || |||| ||||| || | ||||| | | || | Sbjct 9643 CATAAAGTCGAATGGGTTAGTAGCATTGTAAATCTTGTCGAATCCAAGAGCGACCATGAG 9702 Query 35989 TCTATCTGCGACAAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATAAGTTT 36048 | ||| ||||| ||||| ||||| ||||| | ||||| || || | | Sbjct 9703 ACGATCAGCGACGAATTCGATATACTGACACATCAAGGTAGCGTTCATACCGATCAATGC 9762 Query 36049 AACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATAGAGACCGCGTCTGTTATAATAGA 36108 ||| || ||||| | | || ||||||||||| ||| ||| || ||| || || Sbjct 9763 AACAGGCAGAGCATCCGACAGGAATTCTTGTTCGATACCGACGGCTTCTACAATGATGTC 9822 Query 36109 TATTACTGTTTCTTCACTCGGTGGATACAATAAATGTTTAAACATCAAACATGCGAAATC 36168 | || || || ||| ||| | | | || | |||| | ||| || || || Sbjct 9823 CTTGACGCGTTGTTGACTGGGTTGTTTACGGATGTGGGTGAACAAGAGACAGGCAAAGTC 9882 Query 36169 GCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATTAG 36228 ||| ||||| || || | || || ||||| || ||| || | |||||||| | Sbjct 9883 AGTGTGAAGACCTTCATCACGACAGATCAATTCATTACTAAAGGTCAAACCGGGCATCAA 9942 Query 36229 GCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCCTTCTAC 36288 ||||| || || | |||||| ||||| || ||||| ||||||||||| || ||||| || Sbjct 9943 ACCACGTTTCTTTAACCAAAAGATGGAGGCGAATGAGCCAGAAAAGAAGATGCCTTCGAC 10002 Query 36289 TGCCGCAAAGGC 36300 || |||||||| Sbjct 10003 AGCGGCAAAGGC 10014 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 658135234787440