Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopus_20oryzae_20[genbank_20GCA_5F000697195.1_202014-06-02] 4,566 sequences; 42,900,422 total letters Query= NC_003494.1 Length=111362 Score E Sequences producing significant alignments: (Bits) Value seq3946 87.8 1e-12 >seq3946 Length=52427 Score = 87.8 bits (96), Expect = 1e-12 Identities = 117/163 (72%), Gaps = 0/163 (0%) Strand=Plus/Minus Query 22741 CGTCTCTTGGCCTTTGCGGCTGTTGAAGGCGTCATGTTTTCTGGGTCATTTGCGGCCATA 22800 ||||| | || ||||| || || ||||| | | ||||| || |||||||| | || Sbjct 26471 CGTCTTGTTGCTTTTGCTGCAGTAGAAGGTATATTCTTTTCCGGCTCATTTGCTTCTATT 26412 Query 22801 TTCTGGCTGAAGAAACGTTCGCTCATGCCAGGGTTGGCGTTTTCCAACGAGTTGATTAGC 22860 || ||||| ||||||||| | ||||| || ||| | ||| || || |||||| | Sbjct 26411 TTTTGGCTTAAGAAACGTGGTTTGATGCCCGGTTTGACTTTTAGTAATGAATTGATTTGT 26352 Query 22861 CGTGACGAAGGTCTACACTGTGACTTTGCTTGTATGCTGTTTA 22903 |||||||||||||| || || || |||||| | |||||| Sbjct 26351 CGTGACGAAGGTCTTCATACCGATTTCGCTTGTCTTTTGTTTA 26309 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 356213776268098