Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopus_20oryzae_20[genbank_20GCA_5F000697195.1_202014-06-02] 4,566 sequences; 42,900,422 total letters Query= NC_004105.1 Length=209771 Score E Sequences producing significant alignments: (Bits) Value seq2389 372 4e-98 seq3946 187 3e-42 seq4556 129 8e-25 >seq2389 Length=30206 Score = 372 bits (412), Expect = 4e-98 Identities = 752/1107 (68%), Gaps = 14/1107 (1%) Strand=Plus/Plus Query 71695 AAGGCAACAGATGCCAGATTACAAACGGCTACCTCATTAGCATCGGCATATTGTATAATT 71754 || |||| ||| |||| |||||||| || || |||| | | | ||||| | |||| Sbjct 12413 AAAGCAATAGAAGCCAAGTTACAAACAGCAACTTCATCGGGACTTGTATATTCGACAATT 12472 Query 71755 TCAGTGCAAAGATTACTACACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTA 71814 || || ||||| |||||||| || ||||| || || ||||| ||||| |||||| | ||| Sbjct 12473 TCCGTACAAAGGTTACTACATTTAATGGTACCCAAGTTTTGCTGATTGCTCTTTCTATTA 12532 Query 71815 CACGCATCCTTATAAAGAATAAACGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCT 71874 || |||||||| || || ||||| ||| |||| |||||| | || | ||| | || || Sbjct 12533 CAAGCATCCTTGTAGAGCATAAATGGATTACCGGTTTCAGTTTGTGCTTCCAAGATAGCA 12592 Query 71875 TTCCAGACGACTCGAGCCTTTATTATAT-TCTTGTATCTCTT--TTCTCTTTCGTATTGT 71931 | ||| | | | ||||| ||| | | ||| | ||||| ||| | ||| || | Sbjct 12593 TACCATAACTTTTGTGCCTTAATTGTCTCTCTCG---CTCTTCCTTCGCGTTCATAGCTT 12649 Query 71932 GTATATAATCGTTCGAACTCGTCTCCCCAAGCATTGTCTAATCCAGGACATTCATTCGGA 71991 ||| | | ||||| || |||||| ||| | || ||||| |||||| ||| Sbjct 12650 TCATAAAGAGCCACAAACTCATCACCCCAAACATCTTGCAAACCAGGTGCTTCATTAGGA 12709 Query 71992 CACATCAATGACCACTCTCCATCATCATTTACTCGTTTCATAAAGAGATCAGGAATCCAA 72051 || | | ||||| |||||| | || || || |||| ||| |||||||| || | |||| Sbjct 12710 CAAAAGAGAGACCAATCTCCACCGTCCTTGACACGTTGCATGAAGAGATCGGGTACCCAA 12769 Query 72052 AGAGCTATAAATAGATCTCTGGTTCTATGCTCCTCGTTTCCTGTATTCTTTTTAAGATCG 72111 || || ||| | ||| | || ||| || || || || |||||| | | ||| Sbjct 12770 AGGGCATAAAACAAATCACGGGCTCTGATTTCATCCTTACCAAAGTTCTTTCTTAAATCT 12829 Query 72112 AGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCCGGCCGT 72171 | || | | ||||||| |||||| || || | || ||||| | |||| || || Sbjct 12830 AAAAAGGTAAAGATATCAGCATGCCATGGCTCGAGATACATGGCAAAGGCTCCTGGACGC 12889 Query 72172 TTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATA 72231 ||||| || || ||||| | || | || |||||||| | || | |||||| |||| Sbjct 12890 TTGTTGCCGCCTTGATCGACATAACGTGCTGTGTTATTGAATACACGCAACATGGGAAGC 12949 Query 72232 ATACCATTGGATGCACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATATTGCTA 72291 | ||| || || |||||| || |||| |||||| |||| ||||||||||||| | Sbjct 12950 AAACCGTTCGAATAACCATTTGTACCGGCAATATAGGATCCATTGGCACGAATATTATGA 13009 Query 72292 ATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCA 72351 || ||||| || || ||||| |||| || ||| || || |||||| || ||| Sbjct 13010 ATGTTGAGACCGATACCACCTGCAGTTTTCGAAATTTGGGCACAGATTTTTAATGTTTCA 13069 Query 72352 TAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGA 72411 |||||||| || || ||| ||| ||||| | || | || || ||||| || || Sbjct 13070 TAGATGCCTTCAATTGAATCTTCCTTCATGGTGAGCAAGAAGCAAGAGGACATCTGAGGA 13129 Query 72412 CGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGACAGT 72471 ||| || || ||||| || || |||||| || || ||||| |||| || |||| Sbjct 13130 CGAGGTGTACCGGCATTGAACAAAGTAGGACTGGCATGAGTAAAGAATTTCTCGGACATC 13189 Query 72472 AGATTGTACGTCTCAATAGCTGATTCTATATC-CCATTGATGTATTCCTACCGCGACACG 72530 | ||||| ||||| || || | || ||||| || | || || || | |||||||| Sbjct 13190 AAGTTGTAAGTCTCGATTGCAGCGTCAATATCTTCACCG-TGGATACCAATGGCGACACG 13248 Query 72531 CATTAACATATGCTGAGGTCTTTCAACGATCTTGTTATTTATTTTCAACAAGTAGGATTT 72590 ||| | | ||| ||||| | || || ||||| | || || | | |||||| Sbjct 13249 CATGATAAGATGTTGAGGACGCTCGGCGGTCTTGCCGTCAATCTTGAGTAGATAGGATCG 13308 Query 72591 TTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGA 72650 ||| | ||| || || |||||| |||||||| || |||| || |||||||| | || Sbjct 13309 TTCAAGAGTCTTGAATCCAAAAAAGTTGTATTTGAAATCTCTGTCATAAATAATGGCTGA 13368 Query 72651 ATTGA---GTTTATCCTTATATTTGTTAACTATATCCATGGTGATACTTGAAATAATCGG 72707 || | ||| | || | | ||| ||| | | || | | || || || || Sbjct 13369 GTTCAGACGTTCTGCGTTGTCCTGAACAACCTTAT--AGGTTGTTTC-GGATATCATGGG 13425 Query 72708 AGAATGTTTCCCATTTTTAGGATTAACATAGTTGAATAAATCCTCCATCACTTCACTAAA 72767 || || || | | || ||||| ||||||||| | | |||||| ||||||| | ||| Sbjct 13426 GGAGTGCTTGCTTGTCTTGGGATTCACATAGTTGTAGAGATCCTCAATCACTTGAGAAAA 13485 Query 72768 TAGtttttttGTTTCCTTGTGTAGATT 72794 || || |||||||||||||||| ||| Sbjct 13486 TACCTTCTTTGTTTCCTTGTGTAAATT 13512 Score = 114 bits (126), Expect = 2e-20 Identities = 509/804 (63%), Gaps = 11/804 (1%) Strand=Plus/Plus Query 70831 GTACGTAGATAGTACATGCCTGTTTTTAGACCGAGACTCCATCCGTAAAAATGCATACTC 70890 ||||| | ||| ||||| || || || | || ||| || || || |||||||| Sbjct 11482 GTACGCAAATAATACATACCCGTCTTCAATCCCTTTTGCCAACCATAGAAGTGCATACTT 11541 Query 70891 GTTAGTTTGGAATAGCTAGGATCGGCTATGTGAATATTCATCGACTGACTTTGATCGATG 70950 || || || | || | || || || || || |||| ||||||||||| ||| Sbjct 11542 GTCAGCTTACCAAAGTTGGGTTCAGCAATAAAGATGTTCAAACTTTGACTTTGATCAATG 11601 Query 70951 AAGGCTCCCCTGTCTGCAGCCATTTTTATGATCGTCTTTTGTGGAATTTCCCAAATAGTT 71010 |||| || | ||| || ||||| | | || || ||| | ||||||||||| ||| Sbjct 11602 TAGGCGCCACGGTCAGCGGCCATATCAACAATTGTACGTTGAGAAATTTCCCAAACAGTC 11661 Query 71011 TTATAAA-CTCGCTTAATATCTTCTGGAAG-GTTTGTA--TTCTGAATGGATCCACCATC 71066 || || | ||| || | | || |||| || ||| || |||| ||||||||||| Sbjct 11662 TTGTAGAGCTCT-TTGAGGTGTTGAGGAATTGTGGGTACATTTTGAACAGATCCACCATC 11720 Query 71067 TGCAATAATCCTATTTTTGATCTCTTCATTCCATAATTTTCTCTCGGTTAAAACTCTAAG 71126 || || ||| | || |||| || || ||||| | | || ||| | | ||| Sbjct 11721 GGCCATGATCATGTTCTTGACTTCATCGTTCCAGATACCCATATCAACCAAATCACGAAG 11780 Query 71127 GAGATGAGGATTAACTACTTGAAATTCTCCAGACAATACTCTACGAGTGTAAATATTACT 71186 | ||| || || | |||| |||| || || | || | ||| || |||| || Sbjct 11781 TAACCAAGGGTTGACCATTTGATATTCACCCGAGAGCACACGACGGGTATAAAAGTTGGA 11840 Query 71187 GGTATACGGTTCCACTGACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCAT 71246 || || || || | ||||||| ||||| ||||||| || || || || ||||| Sbjct 11841 AGTGTAAGGCTCAAAGCACTCATTGAAACCCAACATTTGAGAGGTGGAAGCGGTAGGCAT 11900 Query 71247 AGGTGCCACCAATAGACTATTTCTAAGACCATGTGATCGG--ATTTTATCTTTTAGAGAT 71304 ||| || | || || ||| | | ||||| | || || || || ||||| || Sbjct 11901 AGGGGCTAATAAGAGTGAATTGCGGACGCCATGC--TTGGCTATCTTTTCCTTTAGTGAA 11958 Query 71305 TCCCAATTCCAAAGATCCGATGGTACAACNNNNNNNNNNNNNNNNNNNNNNATGCCGTTA 71364 |||| | ||||||| | || || ||||| || Sbjct 11959 GCCCAGTCCCAAAGAGAGGTGGGAGTCACATTCCACATGTCGTATTGTAATATGCCCTTG 12018 Query 71365 C-TAGCGTATGATCCTGCATATGTATCGTATGGTCCTTCTTTTTCGGCTAGTTCACAACT 71423 || | | | ||| |||| || || || ||||| | ||||| || | ||| || Sbjct 12019 GATACAGGACTACCCT-CATAAGTTTCATAAGGTCCGTACTTTTCAGCCAATTCGCATGA 12077 Query 71424 CGCCTCTAATGCTCCATAATAAATGGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTC 71483 || || || || | | ||| |||||||| || || | |||| | | || ||||| Sbjct 12078 GGCTTCCAAGGCAGCGTGATAGATGGTTTCAAAGATTTGAATATTTAATTGTTTGGCTTC 12137 Query 71484 CGGGCTATCAAATGGATAATTTAAGAGAATAAACGCGTCTGCTAATCCTTGAACGCCAAT 71543 || ||||| || ||| |||| || || | ||| ||||||||||| || || | Sbjct 12138 AGGAGAGTCAAAGGGGTAACGTAAGGCCATGAATGTGTCGGCTAATCCTTGGACACCTAA 12197 Query 71544 ACCGATAGGTCTGTGTCTCTTATTAGAAATTTCAGCTTCTGGAATAGGATAATAATTAAT 71603 ||||||||| | |||||||| || || |||| ||||| | ||| ||||| || || Sbjct 12198 ACCGATAGGACGATGTCTCTTGTTTGATCTTTCTGCTTCAATGACAGGGTAATAGTTGAT 12257 Query 71604 ATCTATAATTTTATTGAGATTTCT 71627 ||| ||||| || || | ||||| Sbjct 12258 ATCGATAATCTTGTTCAAGTTTCT 12281 >seq3946 Length=52427 Score = 187 bits (206), Expect = 3e-42 Identities = 310/445 (70%), Gaps = 2/445 (0%) Strand=Plus/Plus Query 41776 TTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTCTTTCCTTCCAATGATATATTTTC 41835 ||| || ||| || || ||||| ||||| || |||||||||| || ||| || | || Sbjct 26031 TTGATAATCAGAAACGCGCTTTTCAAAAAAGTTGGTCTTTCCTTGCAGTGAAATCATATC 26090 Query 41836 CATGAAATCAAACGGATTGGTAACATTATAAAtttttttAAATCCCAATTCAGAAATCAA 41895 ||| || ||||||||||| || | |||||||||| | || || | || || | Sbjct 26091 CATAAAGTCAAACGGATTCGTTGCCATATAAATTTTATCGAACCCAAGAGCAACCATAAG 26150 Query 41896 TCTATCTGCGATGAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATAAGTTT 41955 | ||| || | |||||| || ||| ||||| | ||||||| || || | | Sbjct 26151 ACGATCAGCAACGAATTCAATGTATTGACACATCAAAGTAGAATTCATACCAATCAATGC 26210 Query 41956 AACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATAGAGACCGCGTCTGTTATAATAGA 42015 ||| || | || | || | |||||||||||||| || || || |||||||| Sbjct 26211 AACAGGTAATGCATCGGTTAAGAATTCTTGTTCAATGCCTACAGCTTCCATTATAATATC 26270 Query 42016 TCTTACTGTTTCTTCACTCGGTGGAT-ACAATAAATGTTTAAACATCAAACATGCGAAAT 42074 | || || || || ||| | | || | | ||| |||||| | ||| ||||||| Sbjct 26271 CTTCACACGTTGTTGGCTAGGTTGTTTACGA-ATATGAGTAAACAAAAGACAAGCGAAAT 26329 Query 42075 CGCAGTGCAGACCCTCATCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATTA 42134 || || ||||| || || | || ||| ||||| || ||| || | |||||||| | Sbjct 26330 CGGTATGAAGACCTTCGTCACGACAAATCAATTCATTACTAAAAGTCAAACCGGGCATCA 26389 Query 42135 GGCCACGCTTTTTAAGCCAAAATATAGACGCAAATGATCCAGAAAAGAAGATTCCTTCTA 42194 ||||| || ||||||||||| ||||| |||||||| || |||||||| || ||||||| Sbjct 26390 AACCACGTTTCTTAAGCCAAAAAATAGAAGCAAATGAGCCGGAAAAGAATATACCTTCTA 26449 Query 42195 CTGCCGCAAAGGCAATAAGTCTCTC 42219 |||| ||||| |||| ||| | ||| Sbjct 26450 CTGCAGCAAAAGCAACAAGACGCTC 26474 Score = 136 bits (150), Expect = 5e-27 Identities = 207/294 (70%), Gaps = 3/294 (1%) Strand=Plus/Plus Query 42313 TTTTTCATTACTATCTTTAACATATGTATCGATCAAAAGACTATACATTTCTGAATGAAT 42372 |||||| | | |||||| | ||| ||||| ||||||||||| || ||||||| ||||| Sbjct 26626 TTTTTCTTCATCATCTTTTATATAGGTATCAATCAAAAGACTGTATGTTTCTGAGTGAAT 26685 Query 42373 GTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTGGCCTCGGTAACCTGTACTTCTGT 42432 |||||||| || ||||| || || |||||| | || || | || | ||||| Sbjct 26686 ATTTTCAATCATGATTTGAAAGCCATAAAAACATTTAGCTTCAGGAATTTTGACTTCATC 26745 Query 42433 ACAAAATCGTTCAGCTAAATTTTCGTTCACTATTCCGTCACTGGCTGCAAAAAACGCCAA 42492 |||||| || | |||||||| || || || || ||| | ||||| || ||||| Sbjct 26746 ACAAAAGTTTTGCACCAAATTTTCATTTACAATACCATCAGAGCTGGCAAAGAAAGCCAA 26805 Query 42493 TACATGTTTTATAAAATATTTTTCGTCCGGTGTTAATTTATT---CCAATCATTGATATC 42549 || | |||||| || || | | || | ||| || ||||||||| ||| Sbjct 26806 AACGCGAGAAATAAAAAATCGCTCATTCTCAGTCATTTTGTTTTCCCAATCATTTTGATC 26865 Query 42550 TTTAGATATATCTACTTCTTCTACCGTCCAAAATGATGCTTCTGCCTTTTTATA 42603 | || || ||||| |||||| | |||||||| |||||||||||||| ||||| Sbjct 26866 TCTACTTAAATCTATTTCTTCAGCTGTCCAAAAAGATGCTTCTGCCTTCTTATA 26919 >seq4556 Length=51470 Score = 129 bits (142), Expect = 8e-25 Identities = 290/433 (67%), Gaps = 2/433 (0%) Strand=Plus/Plus Query 41776 TTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTCTTTCCTTCCAATGATATATTTTC 41835 ||| || ||| ||||| ||||| ||||| || ||||| |||| | || || | || Sbjct 9583 TTGATAATCAGAAACACGCTTTTCAAAAAAGTTGGTCTTGCCTTGAAGGGAGATCATGTC 9642 Query 41836 CATGAAATCAAACGGATTGGTAACATTATAAAtttttttAAATCCCAATTCAGAAATCAA 41895 ||| || || || || || ||| |||| ||||| || | ||||| | | || | Sbjct 9643 CATAAAGTCGAATGGGTTAGTAGCATTGTAAATCTTGTCGAATCCAAGAGCGACCATGAG 9702 Query 41896 TCTATCTGCGATGAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATAAGTTT 41955 | ||| |||| |||||| ||||| ||||| | ||||| || || | | Sbjct 9703 ACGATCAGCGACGAATTCGATATACTGACACATCAAGGTAGCGTTCATACCGATCAATGC 9762 Query 41956 AACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATAGAGACCGCGTCTGTTATAATAGA 42015 ||| || ||||| | | || ||||||||||| ||| ||| || ||| || || | Sbjct 9763 AACAGGCAGAGCATCCGACAGGAATTCTTGTTCGATACCGACGGCTTCTACAATGAT-GT 9821 Query 42016 TCTT-ACTGTTTCTTCACTCGGTGGATACAATAAATGTTTAAACATCAAACATGCGAAAT 42074 ||| || || || ||| ||| | | | || | |||| | ||| || || | Sbjct 9822 CCTTGACGCGTTGTTGACTGGGTTGTTTACGGATGTGGGTGAACAAGAGACAGGCAAAGT 9881 Query 42075 CGCAGTGCAGACCCTCATCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATTA 42134 | ||| ||||| ||||| | || || ||||| || ||| || | |||||||| | Sbjct 9882 CAGTGTGAAGACCTTCATCACGACAGATCAATTCATTACTAAAGGTCAAACCGGGCATCA 9941 Query 42135 GGCCACGCTTTTTAAGCCAAAATATAGACGCAAATGATCCAGAAAAGAAGATTCCTTCTA 42194 ||||| || || | |||||| || || || ||||| |||||||||||||| ||||| | Sbjct 9942 AACCACGTTTCTTTAACCAAAAGATGGAGGCGAATGAGCCAGAAAAGAAGATGCCTTCGA 10001 Query 42195 CTGCCGCAAAGGC 42207 | || |||||||| Sbjct 10002 CAGCGGCAAAGGC 10014 Score = 113 bits (124), Expect = 6e-20 Identities = 195/283 (69%), Gaps = 3/283 (1%) Strand=Plus/Plus Query 42324 TATCTTTAACATATGTATCGATCAAAAGACTATACATTTCTGAATGAATGTTTTCAATGG 42383 ||||||||| || ||||| ||||| ||||| || |||| | ||||||||||||||| Sbjct 10180 TATCTTTAATGTAGGTATCAATCAAGAGACTGTAAGTTTCAGCATGAATGTTTTCAATCA 10239 Query 42384 CCATCTGAAATCCGTAGAAACATCTGGCCTCGGTAACCTGTACTTCTGTACAAAATCGTT 42443 ||||| || || || |||||| |||| |||| || || ||||| |||||| || Sbjct 10240 TGATCTGGAAACCATAAAAACATTTGGCTTCGGGAATCTTGACTTCATCACAAAAGTTTT 10299 Query 42444 CAGCTAAATTTTCGTTCACTATTCCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTA 42503 | || || || ||||| || || || | | ||||| || ||||| ||| | | Sbjct 10300 GTACCAAGTTCTCATTCACGATACCATCTGAGCCAGCAAAGAAGGCCAAGACACGAGAGA 10359 Query 42504 TAAAATATTTTTCGTCCGGTGTTAATTTATT---CCAATCATTGATATCTTTAGATATAT 42560 |||| | ||||| | | |||||| ||| |||| ||| || | | Sbjct 10360 TAAAGAAACGTTCGTTTTCAGACATTTTATTTTCCCAGTCATGCTGATCCTTGCTCAAGT 10419 Query 42561 CTACTTCTTCTACCGTCCAAAATGATGCTTCTGCCTTTTTATA 42603 | | |||||| | |||||||| || ||||||||||||||||| Sbjct 10420 CAATCTCTTCTGCGGTCCAAAAGGAAGCTTCTGCCTTTTTATA 10462 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 671100894730160