Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopus_20oryzae_20[genbank_20GCA_5F000697195.1_202014-06-02] 4,566 sequences; 42,900,422 total letters Query= NC_004690.1 Length=113220 Score E Sequences producing significant alignments: (Bits) Value seq2600 159 3e-34 seq2841 145 6e-30 seq2614 136 3e-27 seq1352 123 2e-23 seq2553 104 2e-17 >seq2600 Length=207564 Score = 159 bits (176), Expect = 3e-34 Identities = 172/228 (75%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 15137 CCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTT 15196 |||||||| || | ||| || ||||| || || || || |||||||| || ||||||||| Sbjct 124522 CCACCTCTTAAACGTAATACCAAATGGAGTGTTGATTCCTTTTGTATATTATAATCGCTT 124463 Query 15197 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGA 15256 | | | | ||||||| |||||||||||| | || | | |||||| || |||| Sbjct 124462 AATGTACGACCATCTTCTAGTTGTTTGCCAGCAAAGATAAGTCTTTGTTGATCTGGTGGA 124403 Query 15257 ATTCCTTCTTTGTCACAAATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACA 15316 || ||||||||||| |||||| || || ||| | || ||||||||| | ||| || Sbjct 124402 ATACCTTCTTTGTCTTGAATTTTACTTTTCACATTATCAATGGTATCGGAAGATTCAACT 124343 Query 15317 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15364 ||||| || || ||||| ||||| ||||| || ||||| ||||||||| Sbjct 124342 TCTAATGTGATTGTTTTGCCTGTAAGAGTCTTGACAAATATTTGCATA 124295 Score = 136 bits (150), Expect = 3e-27 Identities = 167/228 (73%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 15137 CCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTT 15196 ||||||| ||||||| ||||||||||| || || || ||||| || || || || || Sbjct 124294 CCACCTCGTAATCTTAGCACTAAATGAAGAGTTGATTCCTTTTGAATATTATAGTCACTG 124235 Query 15197 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGA 15256 ||| | | | |||||||||||||||||||| | || | ||||||||| || ||| Sbjct 124234 AGAGTACGACCATCTTCTAATTGTTTGCCAGCAAAGATGAGACGTTGTTGATCAGGAGGA 124175 Query 15257 ATTCCTTCTTTGTCACAAATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACA 15316 || ||||| || || ||| || |||||| | || || |||| | ||| || Sbjct 124174 ATACCTTCCTTATCTTGAATCTTTTGCTTTACGTTATCGATACTATCAGAAGATTCAACT 124115 Query 15317 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15364 ||||| || || |||||||| || || || || ||||||||||||||| Sbjct 124114 TCTAAAGTGATAGTTTTACCAGTAAGGGTCTTGACAAAAATTTGCATA 124067 >seq2841 Length=27215 Score = 145 bits (160), Expect = 6e-30 Identities = 169/228 (74%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 15137 CCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTT 15196 |||||||| || | ||| || |||||||| || || ||||||||||| |||||||| ||| Sbjct 25432 CCACCTCTTAAACGTAATACCAAATGAAGCGTTGATTCTTTTTGTATATTGTAATCACTT 25491 Query 15197 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGA 15256 | | | | ||||| | |||||| ||||| | || | | |||||| ||| ||| Sbjct 25492 AATGTACGACCCTCTTCAAGTTGTTTACCAGCAAAAATTAGTCTTTGTTGATCGGGTGGG 25551 Query 15257 ATTCCTTCTTTGTCACAAATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACA 15316 || |||||||| || ||||||||| || || | || ||||||||| ||| || Sbjct 25552 ATACCTTCTTTATCTTGAATTTTGCTTTTCACGTTATCAATGGTATCGGAGGATTCAACT 25611 Query 15317 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15364 ||||| || || || || ||||| ||||| || ||||| ||||||||| Sbjct 25612 TCTAATGTGATTGTCTTGCCTGTAAGAGTCTTGACAAAGATTTGCATA 25659 Score = 132 bits (146), Expect = 3e-26 Identities = 163/223 (73%), Gaps = 0/223 (0%) Strand=Plus/Plus Query 15142 TCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAAT 15201 ||| || | ||| || || ||||| || || ||||||||||| |||||||| |||| | Sbjct 25671 TCTTAAACGTAATACCAATTGAAGCGTTGATTCTTTTTGTATATTGTAATCACTTAATGT 25730 Query 15202 TCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCC 15261 | | ||||| | |||||| ||||| | || | | |||||| ||| ||| || || Sbjct 25731 ACGACCCTCTTCAAGTTGTTTACCAGCAAAAATTAGTCTTTGTTGATCGGGTGGGATACC 25790 Query 15262 TTCTTTGTCACAAATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAA 15321 |||||| || ||||||||| || || | || ||||||||| ||| || ||||| Sbjct 25791 TTCTTTATCTTGAATTTTGCTTTTCACGTTATCAATGGTATCGGAGGATTCAACTTCTAA 25850 Query 15322 GGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15364 || || || || ||||| ||||| || ||||| ||||||||| Sbjct 25851 TGTGATTGTCTTGCCTGTAAGAGTCTTGACAAAGATTTGCATA 25893 Score = 132 bits (146), Expect = 3e-26 Identities = 163/223 (73%), Gaps = 0/223 (0%) Strand=Plus/Plus Query 15142 TCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAAT 15201 ||| || | ||| || || ||||| || || ||||||||||| |||||||| |||| | Sbjct 25905 TCTTAAACGTAATACCAATTGAAGCGTTGATTCTTTTTGTATATTGTAATCACTTAATGT 25964 Query 15202 TCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCC 15261 | | ||||| | |||||| ||||| | || | | |||||| ||| ||| || || Sbjct 25965 ACGACCCTCTTCAAGTTGTTTACCAGCAAAAATTAGTCTTTGTTGATCGGGTGGGATACC 26024 Query 15262 TTCTTTGTCACAAATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAA 15321 |||||| || ||||||||| || || | || ||||||||| ||| || ||||| Sbjct 26025 TTCTTTATCTTGAATTTTGCTTTTCACGTTATCAATGGTATCGGAGGATTCAACTTCTAA 26084 Query 15322 GGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15364 || || || || ||||| ||||| || ||||| ||||||||| Sbjct 26085 TGTGATTGTCTTGCCTGTAAGAGTCTTGACAAAGATTTGCATA 26127 >seq2614 Length=127402 Score = 136 bits (150), Expect = 3e-27 Identities = 156/210 (74%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 15155 ACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCTTCT 15214 || || ||||| ||||| |||||||| |||||||| || || | | | |||||| Sbjct 59393 ACCAAGTGAAGAGTGGATTCTTTTTGAATGTTGTAGTCTGAAAGGGTACGGCCATCTTCT 59334 Query 15215 AATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCACAA 15274 |||||||| ||||| | ||||||||||||||||| ||||| ||||| ||||| | Sbjct 59333 AATTGTTTACCAGCAAAGATCAAACGTTGTTGGTCAGGAGGAATCCCTTCCTTGTCTTGA 59274 Query 15275 ATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTTTTA 15334 || || ||||||| |||| || |||| | || || ||||| || ||||||||| Sbjct 59273 ATCTTTTGCTTTACATTTTCAATACTATCAGAAGACTCAACTTCTAAAGTGATGGTTTTA 59214 Query 15335 CCTGTCAGAGTTTTTACAAAAATTTGCATA 15364 || || || ||||| || ||||| |||||| Sbjct 59213 CCAGTAAGGGTTTTGACGAAAATCTGCATA 59184 Score = 111 bits (122), Expect = 1e-19 Identities = 153/214 (71%), Gaps = 0/214 (0%) Strand=Plus/Minus Query 15154 AACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCTTC 15213 ||| || || || ||||| || ||||| |||||||| || || | | | ||||| Sbjct 58938 AACCAAGTGGAGAGTGGATTCCTTTTGAATGTTGTAGTCTGAAAGGGTACGACCATCTTC 58879 Query 15214 TAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCACA 15273 | |||||| ||||| | || | |||||||||||| ||||| ||||| ||||| Sbjct 58878 GAGTTGTTTACCAGCAAAAATGAGACGTTGTTGGTCTGGAGGAATACCTTCCTTGTCTTG 58819 Query 15274 AATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTTTT 15333 || || ||||||| |||| ||| |||| | ||| || ||||| || || || || Sbjct 58818 GATCTTTTGCTTTACATTTTCGATGCTATCAGAAGATTCGACTTCTAAAGTGATAGTCTT 58759 Query 15334 ACCTGTCAGAGTTTTTACAAAAATTTGCATATTT 15367 ||||| || || |||||||| |||||||| ||| Sbjct 58758 TCCTGTAAGGGTCTTTACAAAGATTTGCATGTTT 58725 Score = 111 bits (122), Expect = 1e-19 Identities = 151/211 (72%), Gaps = 0/211 (0%) Strand=Plus/Minus Query 15154 AACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCTTC 15213 ||| || || || ||||| || ||||| ||||||||||| || | | | | | ||||| Sbjct 59166 AACCAAGTGGAGAGTGGATTCCTTTTGAATGTTGTAATCACTCAAAGTACGACCATCTTC 59107 Query 15214 TAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCACA 15273 | || || ||||| | ||||||||||| || || ||||| ||||| ||||| Sbjct 59106 GAGCTGCTTACCAGCAAAGATCAAACGTTGCTGATCAGGAGGAATACCTTCCTTGTCTTG 59047 Query 15274 AATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTTTT 15333 ||| || ||| || | || || |||| | ||| || || |||||||||||||| Sbjct 59046 AATCTTTTGCTTGACGTTCTCAATACTATCAGAAGATTCGACTTCCAAGGTAATGGTTTT 58987 Query 15334 ACCTGTCAGAGTTTTTACAAAAATTTGCATA 15364 ||| || || ||||| || ||||| |||||| Sbjct 58986 ACCAGTAAGGGTTTTGACGAAAATCTGCATA 58956 >seq1352 Length=65141 Score = 123 bits (136), Expect = 2e-23 Identities = 154/211 (73%), Gaps = 0/211 (0%) Strand=Plus/Plus Query 15154 AACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCTTC 15213 ||| || ||||||||||| || ||||| || ||||| || || | | | | ||||||| Sbjct 15085 AACCAAGTGAAGGGTGGATTCCTTTTGAATATTGTAGTCACTCAAAGTACGACCGTCTTC 15144 Query 15214 TAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCACA 15273 |||||||| ||||| | |||||||| ||||| || |||||||| || || || Sbjct 15145 CAATTGTTTACCAGCAAAGATCAAACGCTGTTGATCAGGAGGAATTCCCTCCTTATCTTG 15204 Query 15274 AATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTTTT 15333 ||| || ||| ||| | || ||| |||| | || || || || |||||||| || Sbjct 15205 AATCTTTTGCTTGACATTCTCAATGCTATCAGAAGACTCGACTTCCAAAGTAATGGTCTT 15264 Query 15334 ACCTGTCAGAGTTTTTACAAAAATTTGCATA 15364 ||| || ||||| || || |||||||||||| Sbjct 15265 ACCAGTGAGAGTCTTGACGAAAATTTGCATA 15295 Score = 105 bits (116), Expect = 5e-18 Identities = 150/211 (71%), Gaps = 0/211 (0%) Strand=Plus/Plus Query 15154 AACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCTTC 15213 ||| || || || ||||| || ||||| |||||||| || || | | | | ||||||| Sbjct 15541 AACCAAGTGGAGAGTGGATTCCTTTTGGATGTTGTAGTCACTCAAAGTGCGACCGTCTTC 15600 Query 15214 TAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCACA 15273 |||||||| |||||| | || | |||||| || || ||||| || || || || Sbjct 15601 CAATTGTTTACCAGCGAAAATGAGACGTTGCTGATCAGGAGGAATGCCCTCCTTATCTTG 15660 Query 15274 AATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTTTT 15333 ||| || ||| ||| | || ||| |||| | || || || || || ||||| || Sbjct 15661 AATCTTTTGCTTGACATTCTCAATGCTATCAGAAGACTCGACTTCCAAAGTGATGGTCTT 15720 Query 15334 ACCTGTCAGAGTTTTTACAAAAATTTGCATA 15364 ||| |||| ||| || || |||||||||||| Sbjct 15721 ACCAGTCAAAGTCTTGACGAAAATTTGCATA 15751 Score = 105 bits (116), Expect = 5e-18 Identities = 150/211 (71%), Gaps = 0/211 (0%) Strand=Plus/Plus Query 15154 AACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCTTC 15213 ||| || || || ||||| || ||||| |||||||| || || | | | | ||||||| Sbjct 15997 AACCAAGTGGAGAGTGGATTCCTTTTGGATGTTGTAGTCACTCAAAGTGCGACCGTCTTC 16056 Query 15214 TAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCACA 15273 |||||||| |||||| | || | |||||| || || ||||| || || || || Sbjct 16057 CAATTGTTTACCAGCGAAAATGAGACGTTGCTGATCAGGAGGAATGCCCTCCTTATCTTG 16116 Query 15274 AATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTTTT 15333 ||| || ||| ||| | || ||| |||| | || || || || || ||||| || Sbjct 16117 AATCTTTTGCTTGACATTCTCAATGCTATCAGAAGACTCGACTTCCAAAGTGATGGTCTT 16176 Query 15334 ACCTGTCAGAGTTTTTACAAAAATTTGCATA 15364 ||| |||| ||| || || |||||||||||| Sbjct 16177 ACCAGTCAAAGTCTTGACGAAAATTTGCATA 16207 Score = 84.2 bits (92), Expect = 2e-11 Identities = 145/211 (69%), Gaps = 0/211 (0%) Strand=Plus/Plus Query 15154 AACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCTTC 15213 ||| || || || || || || ||||| ||||| || || || | | | ||||| Sbjct 15313 AACCAAGTGGAGAGTAGATTCCTTTTGAATGTTATAGTCTGAAAGGGTGCGGCCATCTTC 15372 Query 15214 TAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCACA 15273 | || || ||||| | |||||||| ||||| || ||||| || || ||||| Sbjct 15373 AAGCTGCTTACCAGCAAAGATCAAACGCTGTTGATCAGGAGGAATGCCCTCCTTGTCTTG 15432 Query 15274 AATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTTTT 15333 ||| || ||| ||| | || || |||| | || || || || || |||||||| Sbjct 15433 AATCTTTTGCTTGACATTCTCAATACTATCAGAAGACTCAACTTCCAAAGTGATGGTTTT 15492 Query 15334 ACCTGTCAGAGTTTTTACAAAAATTTGCATA 15364 ||| |||| ||| || ||||||||||||||| Sbjct 15493 ACCAGTCAAAGTCTTGACAAAAATTTGCATA 15523 Score = 84.2 bits (92), Expect = 2e-11 Identities = 145/211 (69%), Gaps = 0/211 (0%) Strand=Plus/Plus Query 15154 AACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCTTC 15213 ||| || || || || || || ||||| ||||| || || || | | | ||||| Sbjct 15769 AACCAAGTGGAGAGTAGATTCCTTTTGAATGTTATAGTCTGAAAGGGTGCGGCCATCTTC 15828 Query 15214 TAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCACA 15273 | || || ||||| | |||||||| ||||| || ||||| || || ||||| Sbjct 15829 AAGCTGCTTACCAGCAAAGATCAAACGCTGTTGATCAGGAGGAATGCCCTCCTTGTCTTG 15888 Query 15274 AATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTTTT 15333 ||| || ||| ||| | || || |||| | || || || || || |||||||| Sbjct 15889 AATCTTTTGCTTGACATTCTCAATACTATCAGAAGACTCAACTTCCAAAGTGATGGTTTT 15948 Query 15334 ACCTGTCAGAGTTTTTACAAAAATTTGCATA 15364 ||| |||| ||| || ||||||||||||||| Sbjct 15949 ACCAGTCAAAGTCTTGACAAAAATTTGCATA 15979 Score = 84.2 bits (92), Expect = 2e-11 Identities = 155/225 (69%), Gaps = 3/225 (1%) Strand=Plus/Plus Query 15154 AACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCTTC 15213 ||| || || || || || || ||||| |||||||| || || | | | ||||| Sbjct 16225 AACCAAGTGGAGAGTAGATTCCTTTTGAATGTTGTAGTCTGAAAGGGTGCGGCCATCTTC 16284 Query 15214 TAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCACA 15273 | || || ||||| | |||||||||||||| || || || ||||| ||||| Sbjct 16285 AAGCTGCTTACCAGCAAAGATCAAACGTTGTTGATCAGGAGGGATACCTTCCTTGTCTTG 16344 Query 15274 AATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTTTT 15333 ||||| ||| || |||| ||| |||| ||| || || || || ||||| || Sbjct 16345 GATTTTTTGCTTGACGTTTTCGATGCTATCAGAGGATTCGACCTCCAAAGTGATGGTCTT 16404 Query 15334 ACCTGTCAGAGTTTTTACAAAAATTTGCATATTTGAA--AATAAA 15376 || || || ||||| ||||| |||||||| ||| || |||||| Sbjct 16405 GCCAGTAAGTGTTTTAACAAAGATTTGCAT-TTTAAATGAATAAA 16448 >seq2553 Length=14598 Score = 104 bits (114), Expect = 2e-17 Identities = 113/150 (75%), Gaps = 0/150 (0%) Strand=Plus/Minus Query 15154 AACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCTTC 15213 ||| || ||||||||||| || ||||| |||||||| ||||| | | | | ||||||| Sbjct 8204 AACCAAGTGAAGGGTGGATTCCTTTTGAATGTTGTAGTCGCTCAAAGTACGACCGTCTTC 8145 Query 15214 TAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCACA 15273 ||||||||| || ||| | || | |||||||||||| ||||| ||||| ||||| Sbjct 8144 TAATTGTTTACCGGCGAAAATGAGACGTTGTTGGTCAGGAGGAATACCTTCCTTGTCTTG 8085 Query 15274 AATTTTGCTCTTTACAATTTCTATGGTATC 15303 ||| || ||| ||| | || ||||| || Sbjct 8084 AATCTTTTGCTTGACATTGTCAATGGTGTC 8055 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 362159045406606