Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopus_20oryzae_20[genbank_20GCA_5F000697195.1_202014-06-02] 4,566 sequences; 42,900,422 total letters Query= NC_004778.3 Length=129593 Score E Sequences producing significant alignments: (Bits) Value seq1352 89.7 4e-13 >seq1352 Length=65141 Score = 89.7 bits (98), Expect = 4e-13 Identities = 145/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 18833 ACCATGTGCAACGTAGACTCCTTTTGAATATTGTAATCCGCCATTGTTTTGGCGTCCTCC 18892 |||| ||| | ||||| ||||||||||| || || || | | || | | || || Sbjct 15314 ACCAAGTGGAGAGTAGATTCCTTTTGAATGTTATAGTCTGAAAGGGTGCGGCCATCTTCA 15373 Query 18893 AGCTGTTTACCCGCATAAATAAGTCTCTGCTGATCCACGGGCACGCCCTCTTTGTCGGCA 18952 ||||| ||||| ||| | || | | ||| ||||| || | |||||| ||||| | Sbjct 15374 AGCTGCTTACCAGCAAAGATCAAACGCTGTTGATCAGGAGGAATGCCCTCCTTGTCTTGA 15433 Query 18953 ATTTTCTGTTTTACCTGGCCGACAGTATCGCCAGGCTCCGTTTCGACGGTAATGGTTTTA 19012 || || || || || | | | | |||| || ||| ||| | || ||||||||| Sbjct 15434 ATCTTTTGCTTGACATTCTCAATACTATCAGAAGACTCAACTTCCAAAGTGATGGTTTTA 15493 Query 19013 CCTGTTAAAGTTTTGACAAAAATTTGCAT 19041 || || ||||| ||||||||||||||||| Sbjct 15494 CCAGTCAAAGTCTTGACAAAAATTTGCAT 15522 Score = 89.7 bits (98), Expect = 4e-13 Identities = 145/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 18833 ACCATGTGCAACGTAGACTCCTTTTGAATATTGTAATCCGCCATTGTTTTGGCGTCCTCC 18892 |||| ||| | ||||| ||||||||||| || || || | | || | | || || Sbjct 15770 ACCAAGTGGAGAGTAGATTCCTTTTGAATGTTATAGTCTGAAAGGGTGCGGCCATCTTCA 15829 Query 18893 AGCTGTTTACCCGCATAAATAAGTCTCTGCTGATCCACGGGCACGCCCTCTTTGTCGGCA 18952 ||||| ||||| ||| | || | | ||| ||||| || | |||||| ||||| | Sbjct 15830 AGCTGCTTACCAGCAAAGATCAAACGCTGTTGATCAGGAGGAATGCCCTCCTTGTCTTGA 15889 Query 18953 ATTTTCTGTTTTACCTGGCCGACAGTATCGCCAGGCTCCGTTTCGACGGTAATGGTTTTA 19012 || || || || || | | | | |||| || ||| ||| | || ||||||||| Sbjct 15890 ATCTTTTGCTTGACATTCTCAATACTATCAGAAGACTCAACTTCCAAAGTGATGGTTTTA 15949 Query 19013 CCTGTTAAAGTTTTGACAAAAATTTGCAT 19041 || || ||||| ||||||||||||||||| Sbjct 15950 CCAGTCAAAGTCTTGACAAAAATTTGCAT 15978 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 414549729801004