Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopus_20oryzae_20[genbank_20GCA_5F000697195.1_202014-06-02] 4,566 sequences; 42,900,422 total letters Query= NC_005902.1 Length=186250 Score E Sequences producing significant alignments: (Bits) Value seq2418 156 5e-33 >seq2418 Length=25572 Score = 156 bits (172), Expect = 5e-33 Identities = 381/570 (67%), Gaps = 33/570 (6%) Strand=Plus/Plus Query 6704 GAGGATTATAATCTAACAATTCAAAATCTTCAAATTTAAAATCACATAAATTATCAGACt 6763 |||||||||||| | |||| |||||||||||||||| || ||| || | ||| | | Sbjct 13787 GAGGATTATAATTTTCCAATACAAAATCTTCAAATTTGAAGTCATCTATAGAGTCA-ATT 13845 Query 6764 ttttttttAATA-TTACAACAGGTGAAGGTTTTATTGATCGAGT--TAATTGTTCTTTTA 6820 || || || ||| || ||| | || | ||| || || ||| | ||| | Sbjct 13846 TTACGATTGATCCTTAGTGTTGG-GAAAGACCTAG-GCTCGCGTGCTACTTGCTGTTTCA 13903 Query 6821 TAGCTTTTATATGATCTAAATAAATATGAGCATCTCCTAGCGTATGAATAAATTCACCTG 6880 || | | ||||| | |||| ||| | ||| || | ||||| |||||||| || | Sbjct 13904 ATGCATCCAAGTGATCAATGTAAACATGTGTATCACCCATAGTATGTATAAATTCTCCAG 13963 Query 6881 GTTTCATATCAACAGCTTGAGCAATTAAATATGTTAATAATGCATAAGAAGCTACATTAA 6940 | | || ||| | || ||||| | || || | ||||| ||||| | ||||| Sbjct 13964 GATCCAAATCTGTTACGTGTGCAATCATGCGAGTCAAGAGCGCATAGGAAGCAATATTAA 14023 Query 6941 AAGGTACACCTAATCCCATATCTGCTGATCTTTGATAACATTGACAAGATAAAATATTG- 6999 ||||||||||||| |||||||| |||| |||||| |||||||| || Sbjct 14024 AAGGTACACCTAACCCCATATCGCAAGATCGCTGATAAAGCACACAAGATAGTTTAGCAC 14083 Query 7000 --------TCTATAG------------CATAAAATTGACACAATACATGACATGGAGGTA 7039 ||| || ||||||| ||||| || ||||||| ||||||| Sbjct 14084 GTCCACCATCTGAAGGCGGATTGGAAACATAAAACTGACAAAAAGCATGACAAGGAGGTA 14143 Query 7040 AAACAGCCTGATCT--ATATCAGATGGATTCCAAGCAGTCATTAAAATACGTCTATCATT 7097 || | | | || ||||| | ||||||||||||| | | ||| |||||||| | Sbjct 14144 AAGC--CATTATAGGAATATCTGCAGGATTCCAAGCAGAGAGAATAATTCGTCTATCTGT 14201 Query 7098 TGGATTTGTTTTTAATTTTGT-TATAATTATTTGTAATTGATCTATACCCTGACCTTCAT 7156 |||| || |||||||| | | ||| | | ||||| ||||| || || ||||| || Sbjct 14202 TGGA-TTATTTTTAATGGTATCTATCACTTGCTGTAACTGATCAATGCCTTGACCACTAT 14260 Query 7157 AATTAGTATGACAATTTATATAATTAGCTCCAAAATGTCTCCATTGAAACCCATAAATAG 7216 | | ||||| ||||| | || || |||||||| |||||||| || |||||||| | | Sbjct 14261 AGTCAGTATCACAATCAACGTACTTGGCTCCAAAGTGTCTCCACTGGAACCCATAGACTG 14320 Query 7217 GACCTAAATCACCTTCTTCACGATGATTAA 7246 |||| | |||||||||| |||||| ||| Sbjct 14321 GACCAAGATCACCTTCTCGGCGATGAGTAA 14350 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 595837990605600