Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopus_20oryzae_20[genbank_20GCA_5F000697195.1_202014-06-02] 4,566 sequences; 42,900,422 total letters Query= NC_006549.1 Length=140131 Score E Sequences producing significant alignments: (Bits) Value seq2614 138 1e-27 seq1352 129 5e-25 seq2600 122 8e-23 seq2841 98.7 9e-16 seq3863 93.3 4e-14 >seq2614 Length=127402 Score = 138 bits (152), Expect = 1e-27 Identities = 156/209 (75%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 94799 ACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTCC 94858 |||||||| | ||| ||||||||||| | ||| ||||| |||| ||| ||| || Sbjct 59165 ACCAAGTGGAGAGTGGATTCCTTTTGAATGTTGTAATCACTCAAAGTACGACCATCTTCG 59106 Query 94859 AGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAA 94918 ||||| || || ||||||| || | ||||||||| |||||||||||||| ||||| | | Sbjct 59105 AGCTGCTTACCAGCAAAGATCAAACGTTGCTGATCAGGAGGAATACCTTCCTTGTCTTGA 59046 Query 94919 ATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTT 94978 || ||| ||||||| | | | | |||| ||||| || | || |||||||| Sbjct 59045 ATCTTTTGCTTGACGTTCTCAATACTATCAGAAGATTCGACTTCCAAGGTAATGGTTTTA 58986 Query 94979 CCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 |||||||| ||||| || || |||||||| Sbjct 58985 CCAGTAAGGGTTTTGACGAAAATCTGCAT 58957 Score = 104 bits (114), Expect = 2e-17 Identities = 159/225 (71%), Gaps = 4/225 (2%) Strand=Plus/Minus Query 94799 ACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGA--ATCCT 94856 |||||||| | ||| ||||||||||| | ||| || || | | || || || ||| | Sbjct 58937 ACCAAGTGGAGAGTGGATTCCTTTTGAATGTTGTAGTC--TGAAAGGGTACGACCATCTT 58880 Query 94857 CCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCAT 94916 | || ||||| || |||| || | | ||| || ||||||||||||||||| ||||| | Sbjct 58879 CGAGTTGTTTACCAGCAAAAATGAGACGTTGTTGGTCTGGAGGAATACCTTCCTTGTCTT 58820 Query 94917 AAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTT 94976 || ||| ||| || ||| | |||| ||||| || | ||||| || | Sbjct 58819 GGATCTTTTGCTTTACATTTTCGATGCTATCAGAAGATTCGACTTCTAAAGTGATAGTCT 58760 Query 94977 TTCCAGTAAGAGTTTTCACAAAGATCTGCATGCTTACAACATATT 95021 |||| ||||| || || |||||||| |||||| ||| || |||| Sbjct 58759 TTCCTGTAAGGGTCTTTACAAAGATTTGCATGTTTATAATTTATT 58715 Score = 91.5 bits (100), Expect = 1e-13 Identities = 148/211 (70%), Gaps = 4/211 (2%) Strand=Plus/Minus Query 94799 ACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGA--ATCCT 94856 |||||||| | ||| ||||| ||||| | ||| || || | | || || | ||| | Sbjct 59393 ACCAAGTGAAGAGTGGATTCTTTTTGAATGTTGTAGTC--TGAAAGGGTACGGCCATCTT 59336 Query 94857 CCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCAT 94916 | | ||||| || ||||||| || | ||| || || |||||||| ||||| ||||| | Sbjct 59335 CTAATTGTTTACCAGCAAAGATCAAACGTTGTTGGTCAGGAGGAATCCCTTCCTTGTCTT 59276 Query 94917 AAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTT 94976 ||| ||| ||| || | | | | |||| || || || | |||||||||| Sbjct 59275 GAATCTTTTGCTTTACATTTTCAATACTATCAGAAGACTCAACTTCTAAAGTGATGGTTT 59216 Query 94977 TTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 | |||||||| ||||| || || |||||||| Sbjct 59215 TACCAGTAAGGGTTTTGACGAAAATCTGCAT 59185 >seq1352 Length=65141 Score = 129 bits (142), Expect = 5e-25 Identities = 154/209 (74%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 94799 ACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTCC 94858 |||||||| | ||||||||||||||| | ||| || || | ||| | ||| || Sbjct 16226 ACCAAGTGGAGAGTAGATTCCTTTTGAATGTTGTAGTCTGAAAGGGTGCGGCCATCTTCA 16285 Query 94859 AGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAA 94918 ||||| || || ||||||| || | ||| ||||| ||||| |||||||| ||||| | Sbjct 16286 AGCTGCTTACCAGCAAAGATCAAACGTTGTTGATCAGGAGGGATACCTTCCTTGTCTTGG 16345 Query 94919 ATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTT 94978 |||||| ||||||| ||| | |||| | ||||| || | |||||||| || Sbjct 16346 ATTTTTTGCTTGACGTTTTCGATGCTATCAGAGGATTCGACCTCCAAAGTGATGGTCTTG 16405 Query 94979 CCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 |||||||| ||||| |||||||| ||||| Sbjct 16406 CCAGTAAGTGTTTTAACAAAGATTTGCAT 16434 Score = 102 bits (112), Expect = 7e-17 Identities = 148/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 94799 ACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTCC 94858 |||||||| | ||||||||||||||| | |||||| || | ||| | ||| || Sbjct 15314 ACCAAGTGGAGAGTAGATTCCTTTTGAATGTTATAGTCTGAAAGGGTGCGGCCATCTTCA 15373 Query 94859 AGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAA 94918 ||||| || || ||||||| || | || ||||| |||||||| || || ||||| | | Sbjct 15374 AGCTGCTTACCAGCAAAGATCAAACGCTGTTGATCAGGAGGAATGCCCTCCTTGTCTTGA 15433 Query 94919 ATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTT 94978 || ||| |||||| | | | | |||| || || || | ||||||||||| Sbjct 15434 ATCTTTTGCTTGACATTCTCAATACTATCAGAAGACTCAACTTCCAAAGTGATGGTTTTA 15493 Query 94979 CCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 ||||| | ||| || ||||| || ||||| Sbjct 15494 CCAGTCAAAGTCTTGACAAAAATTTGCAT 15522 Score = 102 bits (112), Expect = 7e-17 Identities = 148/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 94799 ACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTCC 94858 |||||||| | ||||||||||||||| | |||||| || | ||| | ||| || Sbjct 15770 ACCAAGTGGAGAGTAGATTCCTTTTGAATGTTATAGTCTGAAAGGGTGCGGCCATCTTCA 15829 Query 94859 AGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAA 94918 ||||| || || ||||||| || | || ||||| |||||||| || || ||||| | | Sbjct 15830 AGCTGCTTACCAGCAAAGATCAAACGCTGTTGATCAGGAGGAATGCCCTCCTTGTCTTGA 15889 Query 94919 ATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTT 94978 || ||| |||||| | | | | |||| || || || | ||||||||||| Sbjct 15890 ATCTTTTGCTTGACATTCTCAATACTATCAGAAGACTCAACTTCCAAAGTGATGGTTTTA 15949 Query 94979 CCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 ||||| | ||| || ||||| || ||||| Sbjct 15950 CCAGTCAAAGTCTTGACAAAAATTTGCAT 15978 Score = 84.2 bits (92), Expect = 2e-11 Identities = 144/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 94799 ACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTCC 94858 |||||||| | ||| ||||||||||| | ||| || || |||| |||| || ||| Sbjct 15542 ACCAAGTGGAGAGTGGATTCCTTTTGGATGTTGTAGTCACTCAAAGTGCGACCGTCTTCC 15601 Query 94859 AGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAA 94918 | ||||| || | || || | | ||||||||| |||||||| || || || || | | Sbjct 15602 AATTGTTTACCAGCGAAAATGAGACGTTGCTGATCAGGAGGAATGCCCTCCTTATCTTGA 15661 Query 94919 ATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTT 94978 || ||| |||||| | | | |||| ||||| || | |||||||| || Sbjct 15662 ATCTTTTGCTTGACATTCTCAATGCTATCAGAAGACTCGACTTCCAAAGTGATGGTCTTA 15721 Query 94979 CCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 ||||| | ||| || || || || ||||| Sbjct 15722 CCAGTCAAAGTCTTGACGAAAATTTGCAT 15750 Score = 84.2 bits (92), Expect = 2e-11 Identities = 144/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 94799 ACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTCC 94858 |||||||| | ||| ||||||||||| | ||| || || |||| |||| || ||| Sbjct 15998 ACCAAGTGGAGAGTGGATTCCTTTTGGATGTTGTAGTCACTCAAAGTGCGACCGTCTTCC 16057 Query 94859 AGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAA 94918 | ||||| || | || || | | ||||||||| |||||||| || || || || | | Sbjct 16058 AATTGTTTACCAGCGAAAATGAGACGTTGCTGATCAGGAGGAATGCCCTCCTTATCTTGA 16117 Query 94919 ATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTT 94978 || ||| |||||| | | | |||| ||||| || | |||||||| || Sbjct 16118 ATCTTTTGCTTGACATTCTCAATGCTATCAGAAGACTCGACTTCCAAAGTGATGGTCTTA 16177 Query 94979 CCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 ||||| | ||| || || || || ||||| Sbjct 16178 CCAGTCAAAGTCTTGACGAAAATTTGCAT 16206 >seq2600 Length=207564 Score = 122 bits (134), Expect = 8e-23 Identities = 166/230 (72%), Gaps = 4/230 (2%) Strand=Plus/Minus Query 94780 TCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCT 94839 ||| ||||| || || || ||||| || | || ||||||||||| | ||||||||||| Sbjct 124523 TCCACCTCTTAAACGTAATACCAAATGGAGTGTTGATTCCTTTTGTATATTATAATCGCT 124464 Query 94840 CATAGTGTTGGA--ATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGA 94897 || ||| || ||| || || ||||| || ||||||| | |||||| |||||||| Sbjct 124463 --TAATGTACGACCATCTTCTAGTTGTTTGCCAGCAAAGATAAGTCTTTGTTGATCTGGT 124406 Query 94898 GGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCG 94957 ||||||||||||||||| | |||||| || || | | || || | || Sbjct 124405 GGAATACCTTCTTTGTCTTGAATTTTACTTTTCACATTATCAATGGTATCGGAAGATTCA 124346 Query 94958 ACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 || || | ||||| ||||| || |||||||| || ||||| || ||||| Sbjct 124345 ACTTCTAATGTGATTGTTTTGCCTGTAAGAGTCTTGACAAATATTTGCAT 124296 Score = 100 bits (110), Expect = 3e-16 Identities = 167/240 (70%), Gaps = 1/240 (0%) Strand=Plus/Minus Query 94769 AAAT-TTTACACTCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCAC 94827 |||| ||| || || |||| |||| | ||| || || | ||| ||||||||||| | Sbjct 124307 AAATATTTGCATACCACCTCGTAATCTTAGCACTAAATGAAGAGTTGATTCCTTTTGAAT 124248 Query 94828 GTTATAATCGCTCATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTG 94887 ||||| || || | ||| ||| || | ||||| || ||||||| | | ||| Sbjct 124247 ATTATAGTCACTGAGAGTACGACCATCTTCTAATTGTTTGCCAGCAAAGATGAGACGTTG 124188 Query 94888 CTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTC 94947 ||||| |||||||||||||| || || | ||| ||| ||| ||| ||| | | || Sbjct 124187 TTGATCAGGAGGAATACCTTCCTTATCTTGAATCTTTTGCTTTACGTTATCGATACTATC 124128 Query 94948 AGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 || || || || | ||||| ||||| |||||||| || || ||||| || ||||| Sbjct 124127 AGAAGATTCAACTTCTAAAGTGATAGTTTTACCAGTAAGGGTCTTGACAAAAATTTGCAT 124068 >seq2841 Length=27215 Score = 98.7 bits (108), Expect = 9e-16 Identities = 161/230 (70%), Gaps = 4/230 (2%) Strand=Plus/Plus Query 94780 TCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCT 94839 ||| ||||| || || || ||||| || | || ||||| ||||| | || ||||| || Sbjct 25431 TCCACCTCTTAAACGTAATACCAAATGAAGCGTTGATTCTTTTTGTATATTGTAATCACT 25490 Query 94840 CATAGTGTTGGAA--TCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGA 94897 || ||| || || || || ||||| || |||| |||| |||||| ||||| || Sbjct 25491 --TAATGTACGACCCTCTTCAAGTTGTTTACCAGCAAAAATTAGTCTTTGTTGATCGGGT 25548 Query 94898 GGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCG 94957 || ||||||||||| || | |||||| || ||| | | || || | | || Sbjct 25549 GGGATACCTTCTTTATCTTGAATTTTGCTTTTCACGTTATCAATGGTATCGGAGGATTCA 25608 Query 94958 ACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 || || | ||||| || || || |||||||| || |||||||| ||||| Sbjct 25609 ACTTCTAATGTGATTGTCTTGCCTGTAAGAGTCTTGACAAAGATTTGCAT 25658 Score = 93.3 bits (102), Expect = 4e-14 Identities = 156/224 (70%), Gaps = 4/224 (2%) Strand=Plus/Plus Query 94786 TCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGT 94845 ||| || || || ||||| || | || ||||| ||||| | || ||||| || || | Sbjct 25671 TCTTAAACGTAATACCAATTGAAGCGTTGATTCTTTTTGTATATTGTAATCACT--TAAT 25728 Query 94846 GTTGGAA--TCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATA 94903 || || || || || ||||| || |||| |||| |||||| ||||| || || ||| Sbjct 25729 GTACGACCCTCTTCAAGTTGTTTACCAGCAAAAATTAGTCTTTGTTGATCGGGTGGGATA 25788 Query 94904 CCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCA 94963 |||||||| || | |||||| || ||| | | || || | | || || || Sbjct 25789 CCTTCTTTATCTTGAATTTTGCTTTTCACGTTATCAATGGTATCGGAGGATTCAACTTCT 25848 Query 94964 ATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 | ||||| || || || |||||||| || |||||||| ||||| Sbjct 25849 AATGTGATTGTCTTGCCTGTAAGAGTCTTGACAAAGATTTGCAT 25892 Score = 93.3 bits (102), Expect = 4e-14 Identities = 156/224 (70%), Gaps = 4/224 (2%) Strand=Plus/Plus Query 94786 TCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGT 94845 ||| || || || ||||| || | || ||||| ||||| | || ||||| || || | Sbjct 25905 TCTTAAACGTAATACCAATTGAAGCGTTGATTCTTTTTGTATATTGTAATCACT--TAAT 25962 Query 94846 GTTGGAA--TCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATA 94903 || || || || || ||||| || |||| |||| |||||| ||||| || || ||| Sbjct 25963 GTACGACCCTCTTCAAGTTGTTTACCAGCAAAAATTAGTCTTTGTTGATCGGGTGGGATA 26022 Query 94904 CCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCA 94963 |||||||| || | |||||| || ||| | | || || | | || || || Sbjct 26023 CCTTCTTTATCTTGAATTTTGCTTTTCACGTTATCAATGGTATCGGAGGATTCAACTTCT 26082 Query 94964 ATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 | ||||| || || || |||||||| || |||||||| ||||| Sbjct 26083 AATGTGATTGTCTTGCCTGTAAGAGTCTTGACAAAGATTTGCAT 26126 >seq3863 Length=144211 Score = 93.3 bits (102), Expect = 4e-14 Identities = 101/134 (75%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 94799 ACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTCC 94858 |||||||| | ||||||||||||||| | ||| || || |||| ||| ||| ||| Sbjct 119968 ACCAAGTGAAGAGTAGATTCCTTTTGAATGTTGTAGTCACTCAAGGTGCGACCATCTTCC 120027 Query 94859 AGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAA 94918 | ||||| ||| | || || | | ||| ||||| |||||||||||||| ||||| | | Sbjct 120028 AATTGTTTACCGGCGAAAATGAGACGTTGTTGATCAGGAGGAATACCTTCCTTGTCTTGA 120087 Query 94919 ATTTTTGCCTTGAC 94932 || ||| |||||| Sbjct 120088 ATCTTTTGCTTGAC 120101 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448265613779760