Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopus_20oryzae_20[genbank_20GCA_5F000697195.1_202014-06-02] 4,566 sequences; 42,900,422 total letters Query= NC_007151.1 Length=149622 Score E Sequences producing significant alignments: (Bits) Value seq3863 125 7e-24 seq2614 122 8e-23 seq2600 118 1e-21 seq2553 107 2e-18 seq1352 105 6e-18 seq2841 100 3e-16 >seq3863 Length=144211 Score = 125 bits (138), Expect = 7e-24 Identities = 119/152 (78%), Gaps = 0/152 (0%) Strand=Plus/Minus Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 |||||||| || | ||||| ||||||||| ||||| ||||| || ||||| |||||| Sbjct 120116 GACACCATTGACAATGTCAAGCAAAAGATTCAAGACAAGGAAGGTATTCCTCCTGATCAA 120057 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948 ||| | ||||||| || ||| |||||| | ||||||| | | | | | || ||||| ||| Sbjct 120056 CAACGTCTCATTTTCGCCGGTAAACAATTGGAAGATGGTCGCACCTTGAGTGACTACAAC 119997 Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTCCT 26980 |||||||| ||||||||| | || |||| || Sbjct 119996 ATTCAAAAGGAATCTACTCTTCACTTGGTTCT 119965 >seq2614 Length=127402 Score = 122 bits (134), Expect = 8e-23 Identities = 156/215 (73%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 26766 AAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCA 26825 || |||||| | |||||||| || | || ||||| | ||||| | ||| | ||||| Sbjct 58726 AACATGCAAATCTTTGTAAAGACCCTTACAGGAAAGACTATCACTTTAGAAGTCGAATCT 58785 Query 26826 AACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGAT 26885 || | |||||| | || || |||||||| ||||| ||||| || ||||| || Sbjct 58786 TCTGATAGCATCGAAAATGTAAAGCAAAAGATCCAAGACAAGGAAGGTATTCCTCCAGAC 58845 Query 26886 CAACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTAT 26945 |||||| | ||||||| | || |||||||||||||||| | | | | | ||||| Sbjct 58846 CAACAACGTCTCATTTTTGCTGGTAAACAACTCGAAGATGGTCGTACCCTTTCAGACTAC 58905 Query 26946 AACATTCAAAAAGAATCTACTATCCATCTGGTCCT 26980 ||||||||||| ||||| ||| |||| |||| || Sbjct 58906 AACATTCAAAAGGAATCCACTCTCCACTTGGTTCT 58940 Score = 98.7 bits (108), Expect = 1e-15 Identities = 149/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 ||||| | || || ||||| | ||||| ||| | || ||| | ||| | ||||| Sbjct 58957 ATGCAGATTTTCGTCAAAACCCTTACTGGTAAAACCATTACCTTGGAAGTCGAATCTTCT 59016 Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 || | || ||| | ||||| ||||||||| ||||| ||||| || ||||| ||||| Sbjct 59017 GATAGTATTGAGAACGTCAAGCAAAAGATTCAAGACAAGGAAGGTATTCCTCCTGATCAG 59076 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948 ||| | | || | | || || || |||||||||| | | | | || || || ||| Sbjct 59077 CAACGTTTGATCTTTGCTGGTAAGCAGCTCGAAGATGGTCGTACTTTGAGTGATTACAAC 59136 Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTCCT 26980 |||||||| ||||| ||| |||| |||| || Sbjct 59137 ATTCAAAAGGAATCCACTCTCCACTTGGTTCT 59168 Score = 89.7 bits (98), Expect = 5e-13 Identities = 147/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 ||||| | || || ||||| | ||||| ||| | ||||| | ||| | || || Sbjct 59185 ATGCAGATTTTCGTCAAAACCCTTACTGGTAAAACCATCACTTTAGAAGTTGAGTCTTCT 59244 Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 || | || || | || || ||||||||| ||||| |||||||| ||||| || ||| Sbjct 59245 GATAGTATTGAAAATGTAAAGCAAAAGATTCAAGACAAGGAAGGGATTCCTCCTGACCAA 59304 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948 ||| | | || | | || |||||| | ||||||| | | | | ||||| ||| Sbjct 59305 CAACGTTTGATCTTTGCTGGTAAACAATTAGAAGATGGCCGTACCCTTTCAGACTACAAC 59364 Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTCCT 26980 |||||||||||||| ||| | || ||||||| Sbjct 59365 ATTCAAAAAGAATCCACTCTTCACTTGGTCCT 59396 >seq2600 Length=207564 Score = 118 bits (130), Expect = 1e-21 Identities = 164/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 |||||| | ||||| || || | || || ||| | ||||| | ||| | ||||| | Sbjct 124296 ATGCAAATATTTGTCAAGACTCTTACAGGCAAAACAATCACATTAGAAGTTGAATCTTCC 124355 Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 || ||||| || | || ||| || ||| ||||||||||| || || || |||||| Sbjct 124356 GATACCATTGATAATGTGAAAAGTAAAATTCAAGACAAAGAAGGTATTCCACCAGATCAA 124415 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948 |||||||| || | | ||||||||||| ||||||| | | | | ||||| ||||| Sbjct 124416 CAAAGACTTATCTTTGCTGGCAAACAACTAGAAGATGGTCGTACATTAAGCGATTATAAT 124475 Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGGAAA 26998 || ||||| ||||| || ||||| |||| | | | ||||| ||||| Sbjct 124476 ATACAAAAGGAATCAACACTCCATTTGGTATTACGTTTAAGAGGTGGAAA 124525 >seq2553 Length=14598 Score = 107 bits (118), Expect = 2e-18 Identities = 106/137 (77%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 |||||||| || | ||||| ||||||||| ||||| ||||| || ||||| || ||| Sbjct 8055 GACACCATTGACAATGTCAAGCAAAAGATTCAAGACAAGGAAGGTATTCCTCCTGACCAA 8114 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948 ||| | ||||||| || ||| |||||| | ||||| | | | | | |||||||| ||| Sbjct 8115 CAACGTCTCATTTTCGCCGGTAAACAATTAGAAGACGGTCGTACTTTGAGCGACTACAAC 8174 Query 26949 ATTCAAAAAGAATCTAC 26965 |||||||| ||||| || Sbjct 8175 ATTCAAAAGGAATCCAC 8191 >seq1352 Length=65141 Score = 105 bits (116), Expect = 6e-18 Identities = 159/226 (70%), Gaps = 0/226 (0%) Strand=Plus/Minus Query 26755 TTTAGTCAAACAAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCG 26814 |||| ||| ||||||||| | ||||| |||||| | ||||| || | ||||| | | Sbjct 16448 TTTATTCATTTAAAATGCAAATCTTTGTTAAAACACTTACTGGCAAGACCATCACTTTGG 16389 Query 26815 AATTAGAATCAAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGA 26874 | | ||||| || | |||||| | ||||| ||||| || ||||| ||||| | Sbjct 16388 AGGTCGAATCCTCTGATAGCATCGAAAACGTCAAGCAAAAAATCCAAGACAAGGAAGGTA 16329 Query 26875 TACCTCCCGATCAACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACG 26934 | ||||| ||||||||| | | || | | || || || || ||||||| | | | Sbjct 16328 TCCCTCCTGATCAACAACGTTTGATCTTTGCTGGTAAGCAGCTTGAAGATGGCCGCACCC 16269 Query 26935 TCAGCGACTATAACATTCAAAAAGAATCTACTATCCATCTGGTCCT 26980 | ||||| ||||||||||| ||||||||| |||| |||| || Sbjct 16268 TTTCAGACTACAACATTCAAAAGGAATCTACTCTCCACTTGGTTCT 16223 Score = 98.7 bits (108), Expect = 1e-15 Identities = 149/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 |||||| | ||||| || || || ||||| ||| | ||||| | ||| | || || Sbjct 15522 ATGCAAATTTTTGTCAAGACTTTGACTGGTAAAACCATCACTTTGGAAGTTGAGTCTTCT 15463 Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 || | || ||| | ||||| ||||||||| ||||| || || || ||||| |||||| Sbjct 15462 GATAGTATTGAGAATGTCAAGCAAAAGATTCAAGACAAGGAGGGCATTCCTCCTGATCAA 15403 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948 || | | || | | || || || || ||||||| | | | | ||||||||| Sbjct 15402 CAGCGTTTGATCTTTGCTGGTAAGCAGCTTGAAGATGGCCGCACCCTTTCAGACTATAAC 15343 Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTCCT 26980 |||||||| ||||||||| |||| |||| || Sbjct 15342 ATTCAAAAGGAATCTACTCTCCACTTGGTTCT 15311 Score = 98.7 bits (108), Expect = 1e-15 Identities = 149/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 |||||| | ||||| || || || ||||| ||| | ||||| | ||| | || || Sbjct 15978 ATGCAAATTTTTGTCAAGACTTTGACTGGTAAAACCATCACTTTGGAAGTTGAGTCTTCT 15919 Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 || | || ||| | ||||| ||||||||| ||||| || || || ||||| |||||| Sbjct 15918 GATAGTATTGAGAATGTCAAGCAAAAGATTCAAGACAAGGAGGGCATTCCTCCTGATCAA 15859 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948 || | | || | | || || || || ||||||| | | | | ||||||||| Sbjct 15858 CAGCGTTTGATCTTTGCTGGTAAGCAGCTTGAAGATGGCCGCACCCTTTCAGACTATAAC 15799 Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTCCT 26980 |||||||| ||||||||| |||| |||| || Sbjct 15798 ATTCAAAAGGAATCTACTCTCCACTTGGTTCT 15767 >seq2841 Length=27215 Score = 100 bits (110), Expect = 3e-16 Identities = 160/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 |||||| | ||||| || || | || || || | ||||| | ||| | ||||| | Sbjct 25658 ATGCAAATCTTTGTCAAGACTCTTACAGGCAAGACAATCACATTAGAAGTTGAATCCTCC 25599 Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 || ||||| || | || ||| || ||| || |||||||| || || ||||||||| Sbjct 25598 GATACCATTGATAACGTGAAAAGCAAAATTCAAGATAAAGAAGGTATCCCACCCGATCAA 25539 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948 |||||||| |||| | || |||||||| ||||| | | | | | || || || || Sbjct 25538 CAAAGACTAATTTTTGCTGGTAAACAACTTGAAGAGGGTCGTACATTAAGTGATTACAAT 25479 Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGGAAA 26998 || ||||||||||| || | ||| |||| | | | ||||| ||||| Sbjct 25478 ATACAAAAAGAATCAACGCTTCATTTGGTATTACGTTTAAGAGGTGGAAA 25429 Score = 95.1 bits (104), Expect = 1e-14 Identities = 139/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 |||||| | ||||| || || | || || || | ||||| | ||| | ||||| | Sbjct 25892 ATGCAAATCTTTGTCAAGACTCTTACAGGCAAGACAATCACATTAGAAGTTGAATCCTCC 25833 Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 || ||||| || | || ||| || ||| || |||||||| || || ||||||||| Sbjct 25832 GATACCATTGATAACGTGAAAAGCAAAATTCAAGATAAAGAAGGTATCCCACCCGATCAA 25773 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948 |||||||| |||| | || |||||||| ||||| | | | | | || || || || Sbjct 25772 CAAAGACTAATTTTTGCTGGTAAACAACTTGAAGAGGGTCGTACATTAAGTGATTACAAT 25713 Query 26949 ATTCAAAAAGAATCTAC 26965 || ||||||||||| || Sbjct 25712 ATACAAAAAGAATCAAC 25696 Score = 95.1 bits (104), Expect = 1e-14 Identities = 139/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 |||||| | ||||| || || | || || || | ||||| | ||| | ||||| | Sbjct 26126 ATGCAAATCTTTGTCAAGACTCTTACAGGCAAGACAATCACATTAGAAGTTGAATCCTCC 26067 Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 || ||||| || | || ||| || ||| || |||||||| || || ||||||||| Sbjct 26066 GATACCATTGATAACGTGAAAAGCAAAATTCAAGATAAAGAAGGTATCCCACCCGATCAA 26007 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948 |||||||| |||| | || |||||||| ||||| | | | | | || || || || Sbjct 26006 CAAAGACTAATTTTTGCTGGTAAACAACTTGAAGAGGGTCGTACATTAAGTGATTACAAT 25947 Query 26949 ATTCAAAAAGAATCTAC 26965 || ||||||||||| || Sbjct 25946 ATACAAAAAGAATCAAC 25930 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478635080343520