Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopus_20oryzae_20[genbank_20GCA_5F000697195.1_202014-06-02] 4,566 sequences; 42,900,422 total letters Query= NC_007383.1 Length=134394 Score E Sequences producing significant alignments: (Bits) Value seq2600 109 5e-19 seq2389 107 2e-18 seq1352 107 2e-18 seq3863 102 7e-17 seq2841 100 2e-16 seq2614 98.7 9e-16 seq2553 89.7 4e-13 >seq2600 Length=207564 Score = 109 bits (120), Expect = 5e-19 Identities = 161/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 |||||| | ||||| || || | || || ||| | || || | ||||| || | | Sbjct 124296 ATGCAAATATTTGTCAAGACTCTTACAGGCAAAACAATCACATTAGAAGTTGAATCTTCC 124355 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 || ||||| || | || ||| || ||| ||||||||||| || || || |||||| Sbjct 124356 GATACCATTGATAATGTGAAAAGTAAAATTCAAGACAAAGAAGGTATTCCACCAGATCAA 124415 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 || ||||| || | | ||||| ||||| ||||||| | | | ||||||||||| Sbjct 124416 CAAAGACTTATCTTTGCTGGCAAACAACTAGAAGATGGTCGTACATTAAGCGATTATAAT 124475 Query 24171 ATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGGA 24218 || ||||| ||||| ||| | ||||| || ||| | || ||||| ||| Sbjct 124476 ATACAAAAGGAATCAACACTCCATTTGGTATTACGTTTAAGAGGTGGA 124523 Score = 107 bits (118), Expect = 2e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 |||||| | ||||| || || | ||||| ||| | || || | ||||| || | Sbjct 124068 ATGCAAATTTTTGTCAAGACCCTTACTGGTAAAACTATCACTTTAGAAGTTGAATCTTCT 124127 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 || | ||||| | || || ||||||||| || || ||||| || ||||| |||||| Sbjct 124128 GATAGTATCGATAACGTAAAGCAAAAGATTCAAGATAAGGAAGGTATTCCTCCTGATCAA 124187 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 || | || || | | ||||| ||| | ||||||| | | |||| || ||||| Sbjct 124188 CAACGTCTCATCTTTGCTGGCAAACAATTAGAAGATGGTCGTACTCTCAGTGACTATAAT 124247 Query 24171 ATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGG 24217 |||||||| ||||| || ||||||||||| ||||||| |||| || Sbjct 124248 ATTCAAAAGGAATCAACTCTTCATTTAGTGCTAAGATTACGAGGTGG 124294 >seq2389 Length=30206 Score = 107 bits (118), Expect = 2e-18 Identities = 340/518 (66%), Gaps = 13/518 (3%) Strand=Plus/Plus Query 133126 CCACATGGCAAAAAATAAATCGCGAGCCTTCATATCTTCCGCGCCCATATTTCGTT-TCA 133184 ||| | |||| |||| ||||| || || | || || ||| || | | ||| || | | Sbjct 12766 CCAAAGGGCATAAAACAAATCACGGGCTCTGATTTCATCCTTACCAA-AGTTCTTTCTTA 12824 Query 133185 AGTCCaaaaaagtaaaaaTGTCTGCATGCCAAGGCTCGATATATACGGCCAAAGCGCCTT 133244 | || ||||| ||||| || || |||||||| ||||||| ||| | ||| || || ||| Sbjct 12825 AATCTAAAAAGGTAAAGATATCAGCATGCCATGGCTCGAGATACATGGCAAAGGCTCCTG 12884 Query 133245 TCC---TTTTACCTCCCTGATCCACATGTCTAAGCATGCTGTTGAAGACACGCAATGCAG 133301 | | || || || ||||| |||| | || | ||||| |||||||| | Sbjct 12885 GACGCTTGTTGCCGCCTTGATCGACATAACGTGCTGTGTTATTGAATACACGCAACATGG 12944 Query 133302 GACCCAATCCTGCGGCAGTACCGTTGGTGGATTTG-ATTTTACTGTT-AGCGGCACGAAT 133359 || ||| || | | ||| || || | | | | || | | ||||||||| Sbjct 12945 GAAGCAAACCGTTCGAATAACCATTTGT--ACCGGCAATATAGGATCCATTGGCACGAAT 13002 Query 133360 TTGAGAAACGTTAAGGCCTATACCGCCTCCGTGTTTAGATATCATGGCACAATCGTTGAG 133419 | | || ||| || || ||||| ||| | ||| || || |||||| || | Sbjct 13003 ATTATGAATGTTGAGACCGATACCACCTGCAGTTTTCGAAATTTGGGCACAGATTTTTAA 13062 Query 133420 AGTTTTATAGATGCCATTGATGCTGTCTTCCTGGATGTTGAGCAAATAACACGACGACAT 133479 |||| ||||||||| | || ||||||| ||| ||||||| | || || ||||| Sbjct 13063 TGTTTCATAGATGCCTTCAATTGAATCTTCCTTCATGGTGAGCAAGAAGCAAGAGGACAT 13122 Query 133480 CTGAGGCATTTTCATGCCAGAAGAAAACAAAGTGGGACTAGCGTGAGTAAACAGCTTTGA 133539 |||||| | || | | |||||||| ||||| || ||||||| || || Sbjct 13123 CTGAGGACGAGGTGTACCGGCATTGAACAAAGTAGGACTGGCATGAGTAA--AGAATTTC 13180 Query 133540 TCG--CATCAATCTGTAGGACTCAATTGCGCTTTCAATGTCTTCACCATGAATTTGTAGC 133597 ||| |||||| |||| | ||| ||||| ||||| |||||||| || || | Sbjct 13181 TCGGACATCAAGTTGTAAGTCTCGATTGCAGCGTCAATATCTTCACCGTGGATACCAATG 13240 Query 133598 GCTACACGCATCAGCATATGTTGAGGTCGCTCCACGGT 133635 || |||||||| | | ||||||||| ||||| |||| Sbjct 13241 GCGACACGCATGATAAGATGTTGAGGACGCTCGGCGGT 13278 >seq1352 Length=65141 Score = 107 bits (118), Expect = 2e-18 Identities = 142/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 |||||| | ||||| || || || ||||| ||| | || || | ||||| ||| | Sbjct 15522 ATGCAAATTTTTGTCAAGACTTTGACTGGTAAAACCATCACTTTGGAAGTTGAGTCTTCT 15463 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 || | || ||| | ||||| ||||||||| ||||| || ||||| ||||| |||||| Sbjct 15462 GATAGTATTGAGAATGTCAAGCAAAAGATTCAAGACAAGGAGGGCATTCCTCCTGATCAA 15403 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 ||| | |||| | | || ||||| || ||||||| | | | | | || |||||| Sbjct 15402 CAGCGTTTGATCTTTGCTGGTAAGCAGCTTGAAGATGGCCGCACCCTTTCAGACTATAAC 15343 Query 24171 ATTCAAAAAGAATCTAC 24187 |||||||| |||||||| Sbjct 15342 ATTCAAAAGGAATCTAC 15326 Score = 107 bits (118), Expect = 2e-18 Identities = 142/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 |||||| | ||||| || || || ||||| ||| | || || | ||||| ||| | Sbjct 15978 ATGCAAATTTTTGTCAAGACTTTGACTGGTAAAACCATCACTTTGGAAGTTGAGTCTTCT 15919 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 || | || ||| | ||||| ||||||||| ||||| || ||||| ||||| |||||| Sbjct 15918 GATAGTATTGAGAATGTCAAGCAAAAGATTCAAGACAAGGAGGGCATTCCTCCTGATCAA 15859 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 ||| | |||| | | || ||||| || ||||||| | | | | | || |||||| Sbjct 15858 CAGCGTTTGATCTTTGCTGGTAAGCAGCTTGAAGATGGCCGCACCCTTTCAGACTATAAC 15799 Query 24171 ATTCAAAAAGAATCTAC 24187 |||||||| |||||||| Sbjct 15798 ATTCAAAAGGAATCTAC 15782 Score = 100 bits (110), Expect = 2e-16 Identities = 142/200 (71%), Gaps = 0/200 (0%) Strand=Plus/Minus Query 23988 AAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCC 24047 ||||||||| | ||||| |||||| | ||||| || | || || | || ||||| || Sbjct 16437 AAAATGCAAATCTTTGTTAAAACACTTACTGGCAAGACCATCACTTTGGAGGTCGAATCC 16378 Query 24048 AACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGAT 24107 || | |||||| | ||||| ||||| || ||||| ||||| || ||||| ||| Sbjct 16377 TCTGATAGCATCGAAAACGTCAAGCAAAAAATCCAAGACAAGGAAGGTATCCCTCCTGAT 16318 Query 24108 CAACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTAT 24167 ||||| | |||| | | || ||||| || ||||||| | | | | | || || Sbjct 16317 CAACAACGTTTGATCTTTGCTGGTAAGCAGCTTGAAGATGGCCGCACCCTTTCAGACTAC 16258 Query 24168 AACATTCAAAAAGAATCTAC 24187 ||||||||||| |||||||| Sbjct 16257 AACATTCAAAAGGAATCTAC 16238 >seq3863 Length=144211 Score = 102 bits (112), Expect = 7e-17 Identities = 112/149 (75%), Gaps = 0/149 (0%) Strand=Plus/Minus Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 |||||||| || | ||||| ||||||||| ||||| ||||| || ||||| |||||| Sbjct 120116 GACACCATTGACAATGTCAAGCAAAAGATTCAAGACAAGGAAGGTATTCCTCCTGATCAA 120057 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 || | || |||| || ||| || ||| | ||||||| | | | | || || || ||| Sbjct 120056 CAACGTCTCATTTTCGCCGGTAAACAATTGGAAGATGGTCGCACCTTGAGTGACTACAAC 119997 Query 24171 ATTCAAAAAGAATCTACAATTCATTTAGT 24199 |||||||| |||||||| |||| || || Sbjct 119996 ATTCAAAAGGAATCTACTCTTCACTTGGT 119968 >seq2841 Length=27215 Score = 100 bits (110), Expect = 2e-16 Identities = 159/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 |||||| | ||||| || || | || || || | || || | ||||| || || | Sbjct 25658 ATGCAAATCTTTGTCAAGACTCTTACAGGCAAGACAATCACATTAGAAGTTGAATCCTCC 25599 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 || ||||| || | || ||| || ||| || |||||||| || || ||||||||| Sbjct 25598 GATACCATTGATAACGTGAAAAGCAAAATTCAAGATAAAGAAGGTATCCCACCCGATCAA 25539 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 || ||||| |||| | || || ||||| ||||| | | | | || ||||| || Sbjct 25538 CAAAGACTAATTTTTGCTGGTAAACAACTTGAAGAGGGTCGTACATTAAGTGATTACAAT 25479 Query 24171 ATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGGA 24218 || ||||||||||| || ||||||| || ||| | || ||||| ||| Sbjct 25478 ATACAAAAAGAATCAACGCTTCATTTGGTATTACGTTTAAGAGGTGGA 25431 Score = 89.7 bits (98), Expect = 4e-13 Identities = 153/222 (69%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 |||||| | ||||| || || | || || || | || || | ||||| || || | Sbjct 25892 ATGCAAATCTTTGTCAAGACTCTTACAGGCAAGACAATCACATTAGAAGTTGAATCCTCC 25833 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 || ||||| || | || ||| || ||| || |||||||| || || ||||||||| Sbjct 25832 GATACCATTGATAACGTGAAAAGCAAAATTCAAGATAAAGAAGGTATCCCACCCGATCAA 25773 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 || ||||| |||| | || || ||||| ||||| | | | | || ||||| || Sbjct 25772 CAAAGACTAATTTTTGCTGGTAAACAACTTGAAGAGGGTCGTACATTAAGTGATTACAAT 25713 Query 24171 ATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGA 24212 || ||||||||||| || |||| || || ||| | || ||| Sbjct 25712 ATACAAAAAGAATCAACGCTTCAATTGGTATTACGTTTAAGA 25671 Score = 89.7 bits (98), Expect = 4e-13 Identities = 153/222 (69%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 |||||| | ||||| || || | || || || | || || | ||||| || || | Sbjct 26126 ATGCAAATCTTTGTCAAGACTCTTACAGGCAAGACAATCACATTAGAAGTTGAATCCTCC 26067 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 || ||||| || | || ||| || ||| || |||||||| || || ||||||||| Sbjct 26066 GATACCATTGATAACGTGAAAAGCAAAATTCAAGATAAAGAAGGTATCCCACCCGATCAA 26007 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 || ||||| |||| | || || ||||| ||||| | | | | || ||||| || Sbjct 26006 CAAAGACTAATTTTTGCTGGTAAACAACTTGAAGAGGGTCGTACATTAAGTGATTACAAT 25947 Query 24171 ATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGA 24212 || ||||||||||| || |||| || || ||| | || ||| Sbjct 25946 ATACAAAAAGAATCAACGCTTCAATTGGTATTACGTTTAAGA 25905 >seq2614 Length=127402 Score = 98.7 bits (108), Expect = 9e-16 Identities = 140/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 ||||| | || || ||||| | ||||| ||| | |||||| | |||||||| | Sbjct 58957 ATGCAGATTTTCGTCAAAACCCTTACTGGTAAAACCATTACCTTGGAAGTCGAATCTTCT 59016 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 || | || ||| | ||||| ||||||||| ||||| ||||| || ||||| ||||| Sbjct 59017 GATAGTATTGAGAACGTCAAGCAAAAGATTCAAGACAAGGAAGGTATTCCTCCTGATCAG 59076 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 || | |||| | | || ||||| |||||||||| | | | || ||||| ||| Sbjct 59077 CAACGTTTGATCTTTGCTGGTAAGCAGCTCGAAGATGGTCGTACTTTGAGTGATTACAAC 59136 Query 24171 ATTCAAAAAGAATCTAC 24187 |||||||| ||||| || Sbjct 59137 ATTCAAAAGGAATCCAC 59153 Score = 86.0 bits (94), Expect = 5e-12 Identities = 139/200 (70%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 23988 AAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCC 24047 || |||||| | |||||||| || | || ||||| | || || | |||||||| | Sbjct 58726 AACATGCAAATCTTTGTAAAGACCCTTACAGGAAAGACTATCACTTTAGAAGTCGAATCT 58785 Query 24048 AACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGAT 24107 || | |||||| | || || |||||||| ||||| ||||| || ||||| || Sbjct 58786 TCTGATAGCATCGAAAATGTAAAGCAAAAGATCCAAGACAAGGAAGGTATTCCTCCAGAC 58845 Query 24108 CAACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTAT 24167 ||||| | || |||| | || || ||||||||||||| | | | | || || Sbjct 58846 CAACAACGTCTCATTTTTGCTGGTAAACAACTCGAAGATGGTCGTACCCTTTCAGACTAC 58905 Query 24168 AACATTCAAAAAGAATCTAC 24187 ||||||||||| ||||| || Sbjct 58906 AACATTCAAAAGGAATCCAC 58925 >seq2553 Length=14598 Score = 89.7 bits (98), Expect = 4e-13 Identities = 109/149 (73%), Gaps = 0/149 (0%) Strand=Plus/Plus Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 |||||||| || | ||||| ||||||||| ||||| ||||| || ||||| || ||| Sbjct 8055 GACACCATTGACAATGTCAAGCAAAAGATTCAAGACAAGGAAGGTATTCCTCCTGACCAA 8114 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 || | || |||| || ||| || ||| | ||||| | | | | ||||| || ||| Sbjct 8115 CAACGTCTCATTTTCGCCGGTAAACAATTAGAAGACGGTCGTACTTTGAGCGACTACAAC 8174 Query 24171 ATTCAAAAAGAATCTACAATTCATTTAGT 24199 |||||||| ||||| || |||| || || Sbjct 8175 ATTCAAAAGGAATCCACCCTTCACTTGGT 8203 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429912074867730