Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopus_20oryzae_20[genbank_20GCA_5F000697195.1_202014-06-02] 4,566 sequences; 42,900,422 total letters Query= NC_009333.1 Length=137969 Score E Sequences producing significant alignments: (Bits) Value seq2418 127 2e-24 >seq2418 Length=25572 Score = 127 bits (140), Expect = 2e-24 Identities = 383/588 (65%), Gaps = 25/588 (4%) Strand=Plus/Plus Query 20190 TGTAGATGTGGGCATCTCCCAACGTGTGAATAAACTCCCCGGG-TCTAAGACCAGTAACA 20248 |||| | || | ||| |||| || || ||||| || || || || || | | || || Sbjct 13922 TGTAAACATGTGTATCACCCATAGTATGTATAAATTCTCCAGGATCCAA-ATCTGTTACG 13980 Query 20249 TGAGCAAGCATATAAGTTAAGAGGGAATAGCTGGCAATGTTAAAAGGAACTCCCAAACCC 20308 || |||| ||| ||| ||||| | |||| ||||| |||||||| || || || ||| Sbjct 13981 TGTGCAATCATGCGAGTCAAGAGCGCATAGGAAGCAATATTAAAAGGTACACCTAACCCC 14040 Query 20309 ATGTCTCCCGACCTCTGATACAGCTGACAGGAAAGCTCACC--GTC----AGCT------ 20356 || || | || | |||||| ||| ||| || || | | | ||| | || Sbjct 14041 ATATCGCAAGATCGCTGATAAAGCACACAAGATAGTTTAGCACGTCCACCATCTGAAGGC 14100 Query 20357 ---------ACATAAAATTGACATAACAAGTGACAGGGCGGAAGCGCCATCAACGACAAG 20407 |||||||| ||||| || ||||| || || | ||||| | | | Sbjct 14101 GGATTGGAAACATAAAACTGACAAAAAGCATGACAAGGAGGTAAAGCCATTATAGGAATA 14160 Query 20408 TCCGCCGGGTTCCACGCACACATAATGATTCTTCTATCGTGCGGATTATTTTTTATTAAA 20467 || || || ||||| ||| | | ||| |||| |||||| ||||||||||| || | Sbjct 14161 TCTGCAGGATTCCAAGCAGAGAGAATAATTCGTCTATCTGTTGGATTATTTTTAATGGTA 14220 Query 20468 TCCACAATGTACGACAATTGGTCAAACCCCTGGCCTGTATAGTCAGCATCCGCGTCCACG 20527 || | | | | || || |||| || || || ||||||||| ||| || ||| Sbjct 14221 TCTATCACTTGCTGTAACTGATCAATGCCTTGACCACTATAGTCAGTATCACAATCAACG 14280 Query 20528 TACGCCGCCCCAAAGTGCCTCCACTGGAAACCGTAAACAGGTCCCAAATCCCCCTCCCTT 20587 ||| || |||||||| ||||||||||| || || || || || | ||| || || | Sbjct 14281 TACTTGGCTCCAAAGTGTCTCCACTGGAACCCATAGACTGGACCAAGATCACCTTCTCGG 14340 Query 20588 CTGTGCGCCAGGCCGCGCCCGGCCAGGAACTCCCTGGAGCCATTTTTGTCCCATATCTTG 20647 | || | || || || | |||||||| | ||||| || ||||| |||||| Sbjct 14341 CGATGAGTAAGACCCAGCTTATCAAGGAACTCACGAGAGCCGTTGCCATCCCAGATCTTG 14400 Query 20648 AC-TCCTGTTCTTGAAAGCTCCCTGGAGTCAGTACTCCCCTTCAGAAACCAAAGCAGCTC 20706 || | | || | ||| | | |||| |||| ||||| | ||||||||| || || Sbjct 14401 ACATTGCGCTCATTCAAG-TGTTTTGAGTTAGTATCGCCCTTGATAAACCAAAGAAGTTC 14459 Query 20707 TTGCACTACGCCTCGCCAAAACACCCGCTTTGTGGTTAGTAAGGGAAA 20754 || | || |||| | || || ||||||||||| || | ||||| Sbjct 14460 TTCGAGCACACCTCTAAAGAATACACGCTTTGTGGTGAGGAGAGGAAA 14507 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 441347608647440