Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopus_20oryzae_20[genbank_20GCA_5F000697195.1_202014-06-02] 4,566 sequences; 42,900,422 total letters Query= NC_009503.1 Length=124121 Score E Sequences producing significant alignments: (Bits) Value seq2614 82.4 6e-11 >seq2614 Length=127402 Score = 82.4 bits (90), Expect = 6e-11 Identities = 151/219 (69%), Gaps = 2/219 (1%) Strand=Plus/Minus Query 33910 AGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGCCAATTGTCGC 33969 || || || |||| || || ||| ||||| |||||||||||||| ||| || Sbjct 59174 AGACGGAGAACCAAGTGGAGAGTGGATTCCTTTTGAATGTTGTAATCACTCAAAGTACGA 59115 Query 33970 TCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCGGCACGCTCTCT 34029 | || || | ||||| || ||||| |||| || |||||||| || | | || Sbjct 59114 CCATCTTCGAGCTGCTTACCAGCAAAGATCAAACGTTGCTGATCAGGAGGAATACCTTCC 59055 Query 34030 TTGTCCATAATTTTTTGCTTAATGGAACTC-ACACTATCAGTAGATTCGCATTCGACCGT 34088 ||||| ||| |||||||| | | ||| | |||||||| ||||||| ||| | || Sbjct 59054 TTGTCTTGAATCTTTTGCTTGA-CGTTCTCAATACTATCAGAAGATTCGACTTCCAAGGT 58996 Query 34089 TATTGTTTTTCCGGTTAGTGTTTTCACAAAGATTTGCAT 34127 || ||||| || || || ||||| || || || ||||| Sbjct 58995 AATGGTTTTACCAGTAAGGGTTTTGACGAAAATCTGCAT 58957 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397040304221932