Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopus_20oryzae_20[genbank_20GCA_5F000697195.1_202014-06-02] 4,566 sequences; 42,900,422 total letters Query= NC_009898.1 Length=368683 Score E Sequences producing significant alignments: (Bits) Value seq2600 134 3e-26 seq4556 123 6e-23 seq2841 122 2e-22 seq3946 116 9e-21 seq2614 116 9e-21 seq1352 111 4e-19 >seq2600 Length=207564 Score = 134 bits (148), Expect = 3e-26 Identities = 170/231 (74%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| || | ||| || || | ||||| || ||| ||||| ||||||||||| | Sbjct 124294 CCACCTCGTAATCTTAGCACTAAATGAAGAGTTGATTCCTTTTGAATATTATAGTCACTG 124235 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || || || || |||||||||||||| || || ||||| ||||| |||||| | || Sbjct 124234 AGAGTACGACCATCTTCTAATTGTTTGCCAGCAAAGATGAGACGTTGTTGATCAGGAGGA 124175 Query 288367 ATTCCTTCTTTATCCTGGAT-TTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTAC 288425 || ||||| ||||| || || ||| ||||| ||||| || ||| ||| ||||| || Sbjct 124174 ATACCTTCCTTATCTTGAATCTTTTGCTTT-ACGTTATCGATACTATCAGAAGATTCAAC 124116 Query 288426 TTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATTAT 288476 ||| | ||||| || || || || || |||||||| || || ||||| || Sbjct 124115 TTCTAAAGTGATAGTTTTACCAGTAAGGGTCTTGACAAAAATTTGCATAAT 124065 Score = 116 bits (128), Expect = 9e-21 Identities = 141/192 (73%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341 ||| ||||| |||||||| ||| | || || || ||||||| |||||| || || || Sbjct 124487 TTCCTTTTGTATATTATAATCGCTTAATGTACGACCATCTTCTAGTTGTTTGCCAGCAAA 124428 Query 288342 GATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTT 288401 ||| || | |||||| ||| || |||||||| || || ||||| |||||| || Sbjct 124427 GATAAGTCTTTGTTGATCTGGTGGAATACCTTCTTTGTCTTGAATTTTACTTTTCACATT 124368 Query 288402 TTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGAC 288461 || || | |||| ||||| ||||| | ||||| || || || || ||||||||||| Sbjct 124367 ATCAATGGTATCGGAAGATTCAACTTCTAATGTGATTGTTTTGCCTGTAAGAGTCTTGAC 124308 Query 288462 GAATATCTGCAT 288473 ||||| ||||| Sbjct 124307 AAATATTTGCAT 124296 >seq4556 Length=51470 Score = 123 bits (136), Expect = 6e-23 Identities = 168/232 (72%), Gaps = 2/232 (1%) Strand=Plus/Minus Query 269112 CGAAAAAGAGTTCATTTGTGACGCTATCCCATGTTCTAT-GATCGGTATGAATGCCGATC 269170 |||| |||| ||| | | || ||| | || |||| || |||||||||||| || Sbjct 9796 CGAACAAGAATTCCTGTCGGATGCTCTGCC-TGTTGCATTGATCGGTATGAACGCTACCT 9738 Query 269171 TCATGAATCAATATATCGAATTCGTGGCTGATCGTATCTTCACGGCACTCGGTTATGAGA 269230 | ||| ||| |||||||||||||| ||||||||| || | || || || | || | Sbjct 9737 TGATGTGTCAGTATATCGAATTCGTCGCTGATCGTCTCATGGTCGCTCTTGGATTCGACA 9678 Query 269231 AAGTGTACAATTCGAAGAATCCCTTCGCCTTTATGGAACTAATTTCGCTCGAAGGAAAGA 269290 | | |||||| | | || || |||| ||||||||| | || || || |||| |||| Sbjct 9677 AGATTTACAATGCTACTAACCCATTCGACTTTATGGACATGATCTCCCTTCAAGGCAAGA 9618 Query 269291 CGAACTTCTTCGAAAAGCGTGTCAGCGACTATCAACGTCCTGGTGTAATGAA 269342 | ||||| || ||||||||||| || ||||||||| ||||||| ||||| Sbjct 9617 CCAACTTTTTTGAAAAGCGTGTTTCTGATTATCAACGTGCTGGTGTCATGAA 9566 >seq2841 Length=27215 Score = 122 bits (134), Expect = 2e-22 Identities = 153/210 (73%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 288264 TACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTC 288323 ||| | ||||| ||| ||||||||| ||||| || || | || || || ||||| Sbjct 25449 TACCAAATGAAGCGTTGATTCTTTTTGTATATTGTAATCACTTAATGTACGACCCTCTTC 25508 Query 288324 TAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTG 288383 | |||||| || || || || || | |||||| |||||| ||||||||||| || Sbjct 25509 AAGTTGTTTACCAGCAAAAATTAGTCTTTGTTGATCGGGTGGGATACCTTCTTTATCTTG 25568 Query 288384 GATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTT 288443 ||||| ||||||||| || || | |||| ||||| ||||| | ||||| ||||| Sbjct 25569 AATTTTGCTTTTCACGTTATCAATGGTATCGGAGGATTCAACTTCTAATGTGATTGTCTT 25628 Query 288444 CCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || ||||||||||| || || ||||| Sbjct 25629 GCCTGTAAGAGTCTTGACAAAGATTTGCAT 25658 Score = 118 bits (130), Expect = 3e-21 Identities = 148/203 (73%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 288271 TGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGT 288330 |||| ||| ||||||||| ||||| || || | || || || ||||| | |||| Sbjct 25690 TGAAGCGTTGATTCTTTTTGTATATTGTAATCACTTAATGTACGACCCTCTTCAAGTTGT 25749 Query 288331 TTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTC 288390 || || || || || || | |||||| |||||| ||||||||||| || ||||| Sbjct 25750 TTACCAGCAAAAATTAGTCTTTGTTGATCGGGTGGGATACCTTCTTTATCTTGAATTTTG 25809 Query 288391 GCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTC 288450 ||||||||| || || | |||| ||||| ||||| | ||||| ||||| || || Sbjct 25810 CTTTTCACGTTATCAATGGTATCGGAGGATTCAACTTCTAATGTGATTGTCTTGCCTGTA 25869 Query 288451 AGAGTCTTGACGAATATCTGCAT 288473 ||||||||||| || || ||||| Sbjct 25870 AGAGTCTTGACAAAGATTTGCAT 25892 Score = 118 bits (130), Expect = 3e-21 Identities = 148/203 (73%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 288271 TGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGT 288330 |||| ||| ||||||||| ||||| || || | || || || ||||| | |||| Sbjct 25924 TGAAGCGTTGATTCTTTTTGTATATTGTAATCACTTAATGTACGACCCTCTTCAAGTTGT 25983 Query 288331 TTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTC 288390 || || || || || || | |||||| |||||| ||||||||||| || ||||| Sbjct 25984 TTACCAGCAAAAATTAGTCTTTGTTGATCGGGTGGGATACCTTCTTTATCTTGAATTTTG 26043 Query 288391 GCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTC 288450 ||||||||| || || | |||| ||||| ||||| | ||||| ||||| || || Sbjct 26044 CTTTTCACGTTATCAATGGTATCGGAGGATTCAACTTCTAATGTGATTGTCTTGCCTGTA 26103 Query 288451 AGAGTCTTGACGAATATCTGCAT 288473 ||||||||||| || || ||||| Sbjct 26104 AGAGTCTTGACAAAGATTTGCAT 26126 >seq3946 Length=52427 Score = 116 bits (128), Expect = 9e-21 Identities = 170/241 (71%), Gaps = 6/241 (2%) Strand=Plus/Minus Query 269150 TGATCGGTATGAATGCCGATCTCATGAATCAATATATCGAATTCGTGGCTGATCGTATCT 269209 |||| ||||||||| | | | ||| |||||| || |||||||| ||||||||| | Sbjct 26206 TGATTGGTATGAATTCTACTTTGATGTGTCAATACATTGAATTCGTTGCTGATCGTCTTA 26147 Query 269210 TCACGGCACTCGGTTATGAGAAAGTGTACAATTCGAAGAATCCCTTCGCCTTTATGGAAC 269269 | || || || | || ||| | || | | | |||||| || | ||||||||| Sbjct 26146 TGGTTGCTCTTGGGTTCGATAAAATTTATATGGCAACGAATCCGTTTGACTTTATGGATA 26087 Query 269270 TAATTTCGCTCGAAGGAAAGACGAACTTCTTCGAAAAGCGTGTCAGCGACTATCAACGTC 269329 | ||||| || |||||||||| ||||| || |||||||| || || ||||||||| Sbjct 26086 TGATTTCACTGCAAGGAAAGACCAACTTTTTTGAAAAGCGCGTTTCTGATTATCAACGTG 26027 Query 269330 CTGGTGTAATGAA------TCCAGAAGACAATATTTTTGCCATCGATGATGATTTTTAAG 269383 ||||||| ||||| ||| | || || | ||| | | |||| ||||||||||| Sbjct 26026 CTGGTGTCATGAACAAGACTCCTGTGGAGAAAAAATTTACATTGGATGCTGATTTTTAAG 25967 Query 269384 A 269384 | Sbjct 25966 A 25966 >seq2614 Length=127402 Score = 116 bits (128), Expect = 9e-21 Identities = 164/228 (72%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 || || || || | ||| || | |||| ||| ||||||||| || || ||||| | Sbjct 59411 CCGCCACGAAGACGAAGGACCAAGTGAAGAGTGGATTCTTTTTGAATGTTGTAGTCTGAA 59352 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || || || || |||||||||||||| || || ||||||| ||| ||||| | || Sbjct 59351 AGGGTACGGCCATCTTCTAATTGTTTACCAGCAAAGATCAAACGTTGTTGGTCAGGAGGA 59292 Query 288367 ATTCCTTCTTTATCCTGGAT-TTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTAC 288425 || ||||| || || || || ||| ||||| || ||||| ||| ||| || || || Sbjct 59291 ATCCCTTCCTTGTCTTGAATCTTTTGCTTT-ACATTTTCAATACTATCAGAAGACTCAAC 59233 Query 288426 TTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 ||| | ||||| || || || || || || |||||||| |||||||| Sbjct 59232 TTCTAAAGTGATGGTTTTACCAGTAAGGGTTTTGACGAAAATCTGCAT 59185 >seq1352 Length=65141 Score = 111 bits (122), Expect = 4e-19 Identities = 163/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| || || | || || | |||| ||| ||| ||||| ||||| ||||| Sbjct 15068 CCACCACGAAGACGGAGAACCAAGTGAAGGGTGGATTCCTTTTGAATATTGTAGTCACTC 15127 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 | || || |||||||| |||||||| || || ||||||| |||||||||| | || Sbjct 15128 AAAGTACGACCGTCTTCCAATTGTTTACCAGCAAAGATCAAACGCTGTTGATCAGGAGGA 15187 Query 288367 ATTCCTTCTTTATCCTGGAT-TTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTAC 288425 ||||| || ||||| || || ||| |||| || || || || ||| || || || Sbjct 15188 ATTCCCTCCTTATCTTGAATCTTTTGCTTG-ACATTCTCAATGCTATCAGAAGACTCGAC 15246 Query 288426 TTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 ||| | || || ||||| || || |||||||||||||| || ||||| Sbjct 15247 TTCCAAAGTAATGGTCTTACCAGTGAGAGTCTTGACGAAAATTTGCAT 15294 Score = 102 bits (112), Expect = 2e-16 Identities = 140/193 (73%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341 ||| |||||||| || ||||| | ||||| |||||||| |||||||| || ||||| Sbjct 15559 TTCCTTTTGGATGTTGTAGTCACTCAAAGTGCGACCGTCTTCCAATTGTTTACCAGCGAA 15618 Query 288342 GATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGAT-TTTCGCTTTCACGT 288400 || ||||| || ||| | || || || || ||||| || || ||| |||| || | Sbjct 15619 AATGAGACGTTGCTGATCAGGAGGAATGCCCTCCTTATCTTGAATCTTTTGCTTG-ACAT 15677 Query 288401 TTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGA 288460 | || || ||| || || ||||| | ||||| ||||| || |||| |||||||| Sbjct 15678 TCTCAATGCTATCAGAAGACTCGACTTCCAAAGTGATGGTCTTACCAGTCAAAGTCTTGA 15737 Query 288461 CGAATATCTGCAT 288473 |||| || ||||| Sbjct 15738 CGAAAATTTGCAT 15750 Score = 102 bits (112), Expect = 2e-16 Identities = 140/193 (73%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341 ||| |||||||| || ||||| | ||||| |||||||| |||||||| || ||||| Sbjct 16015 TTCCTTTTGGATGTTGTAGTCACTCAAAGTGCGACCGTCTTCCAATTGTTTACCAGCGAA 16074 Query 288342 GATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGAT-TTTCGCTTTCACGT 288400 || ||||| || ||| | || || || || ||||| || || ||| |||| || | Sbjct 16075 AATGAGACGTTGCTGATCAGGAGGAATGCCCTCCTTATCTTGAATCTTTTGCTTG-ACAT 16133 Query 288401 TTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGA 288460 | || || ||| || || ||||| | ||||| ||||| || |||| |||||||| Sbjct 16134 TCTCAATGCTATCAGAAGACTCGACTTCCAAAGTGATGGTCTTACCAGTCAAAGTCTTGA 16193 Query 288461 CGAATATCTGCAT 288473 |||| || ||||| Sbjct 16194 CGAAAATTTGCAT 16206 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1179585388005748