Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopus_20oryzae_20[genbank_20GCA_5F000697195.1_202014-06-02] 4,566 sequences; 42,900,422 total letters Query= NC_010240.1 Length=169794 Score E Sequences producing significant alignments: (Bits) Value seq2841 93.3 5e-14 seq1352 93.3 5e-14 seq4547 89.7 6e-13 seq3189 89.7 6e-13 seq2679 89.7 6e-13 seq2600 89.7 6e-13 seq2352 89.7 6e-13 seq2345 89.7 6e-13 seq1652 89.7 6e-13 seq2936 87.8 2e-12 seq1977 87.8 2e-12 seq1480 87.8 2e-12 seq754 87.8 2e-12 seq2614 86.0 7e-12 seq3185 84.2 2e-11 seq4299 82.4 8e-11 >seq2841 Length=27215 Score = 93.3 bits (102), Expect = 5e-14 Identities = 159/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 41982 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 42041 || ||||||||||| || |||||||| | || || ||||| |||||||||||| Sbjct 25432 CCACCTCTTAAACGTAATACCAAATGAAGCGTTGATTCTTTTTGTATATTGTAATCACTT 25491 Query 42042 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGC 42101 | || || | || || || || |||||||| || || |||| || || |||| ||| Sbjct 25492 AATGTACGACCCTCTTCAAGTTGTTTACCAGCAAAAATTAGTCTTTGTTGATCGGGTGGG 25551 Query 42102 ACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCG-TCGCCACCGTGTCGCTCGATTCCAC 42160 | | || ||| | ||| |||| ||| || | | | || ||| ||||| || Sbjct 25552 ATAC-CTTCTTTATCTTGAATTTTGCTTTTCACGTTATCAATGGTATCGGAGGATTCAAC 25610 Query 42161 ATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 || | ||||| || ||||| || || ||||| |||||||||||||| Sbjct 25611 TTCTAATGTGATTGTCTTGCCTGTAAGAGTCTTGACAAAGATTTGCAT 25658 Score = 84.2 bits (92), Expect = 2e-11 Identities = 154/223 (69%), Gaps = 2/223 (1%) Strand=Plus/Plus Query 41987 TCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGT 42046 ||||||||| || ||||| || | || || ||||| |||||||||||| | || Sbjct 25671 TCTTAAACGTAATACCAATTGAAGCGTTGATTCTTTTTGTATATTGTAATCACTTAATGT 25730 Query 42047 CCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCT 42106 || | || || || || |||||||| || || |||| || || |||| ||| | | Sbjct 25731 ACGACCCTCTTCAAGTTGTTTACCAGCAAAAATTAGTCTTTGTTGATCGGGTGGGATAC- 25789 Query 42107 CTCCTTGTCCATGATTTTTTGTTTGAGCG-TCGCCACCGTGTCGCTCGATTCCACATCGA 42165 || ||| | ||| |||| ||| || | | | || ||| ||||| || || | Sbjct 25790 CTTCTTTATCTTGAATTTTGCTTTTCACGTTATCAATGGTATCGGAGGATTCAACTTCTA 25849 Query 42166 CCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 ||||| || ||||| || || ||||| |||||||||||||| Sbjct 25850 ATGTGATTGTCTTGCCTGTAAGAGTCTTGACAAAGATTTGCAT 25892 Score = 84.2 bits (92), Expect = 2e-11 Identities = 154/223 (69%), Gaps = 2/223 (1%) Strand=Plus/Plus Query 41987 TCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGT 42046 ||||||||| || ||||| || | || || ||||| |||||||||||| | || Sbjct 25905 TCTTAAACGTAATACCAATTGAAGCGTTGATTCTTTTTGTATATTGTAATCACTTAATGT 25964 Query 42047 CCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCT 42106 || | || || || || |||||||| || || |||| || || |||| ||| | | Sbjct 25965 ACGACCCTCTTCAAGTTGTTTACCAGCAAAAATTAGTCTTTGTTGATCGGGTGGGATAC- 26023 Query 42107 CTCCTTGTCCATGATTTTTTGTTTGAGCG-TCGCCACCGTGTCGCTCGATTCCACATCGA 42165 || ||| | ||| |||| ||| || | | | || ||| ||||| || || | Sbjct 26024 CTTCTTTATCTTGAATTTTGCTTTTCACGTTATCAATGGTATCGGAGGATTCAACTTCTA 26083 Query 42166 CCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 ||||| || ||||| || || ||||| |||||||||||||| Sbjct 26084 ATGTGATTGTCTTGCCTGTAAGAGTCTTGACAAAGATTTGCAT 26126 >seq1352 Length=65141 Score = 93.3 bits (102), Expect = 5e-14 Identities = 137/194 (71%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 42018 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 42077 ||||||||||| ||||| || | || || || | || || |||||||||||||| || Sbjct 16244 TCCTTTTGAATGTTGTAGTCTGAAAGGGTGCGGCCATCTTCAAGCTGCTTACCAGCAAAG 16303 Query 42078 ATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTC 42137 || | || || || || | || | | |||||||| ||||||||| |||| | Sbjct 16304 ATCAAACGTTGTTGATCAGGAGGGATACCTTCCTTGTCTTGGATTTTTTGCTTGACGTTT 16363 Query 42138 GCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACA 42197 | | | || ||||| || || | |||||||| ||||| || || || || ||| Sbjct 16364 TCGATGCTATCAGAGGATTCGACCTCCAAAGTGATGGTCTTGCCAGTAAGTGTTTTAACA 16423 Query 42198 AAGATTTGCATTTT 42211 |||||||||||||| Sbjct 16424 AAGATTTGCATTTT 16437 Score = 84.2 bits (92), Expect = 2e-11 Identities = 133/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 42018 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 42077 ||||||||||| || || || | || || || | || || |||||||||||||| || Sbjct 15332 TCCTTTTGAATGTTATAGTCTGAAAGGGTGCGGCCATCTTCAAGCTGCTTACCAGCAAAG 15391 Query 42078 ATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTC 42137 || | ||||| || || | || | || ||||||||| || ||||| |||| || Sbjct 15392 ATCAAACGCTGTTGATCAGGAGGAATGCCCTCCTTGTCTTGAATCTTTTGCTTGACATTC 15451 Query 42138 GCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACA 42197 | | | || || || || || | ||||||||||| || || | ||||| ||| Sbjct 15452 TCAATACTATCAGAAGACTCAACTTCCAAAGTGATGGTTTTACCAGTCAAAGTCTTGACA 15511 Query 42198 AAGATTTGCAT 42208 || |||||||| Sbjct 15512 AAAATTTGCAT 15522 Score = 84.2 bits (92), Expect = 2e-11 Identities = 133/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 42018 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 42077 ||||||||||| || || || | || || || | || || |||||||||||||| || Sbjct 15788 TCCTTTTGAATGTTATAGTCTGAAAGGGTGCGGCCATCTTCAAGCTGCTTACCAGCAAAG 15847 Query 42078 ATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTC 42137 || | ||||| || || | || | || ||||||||| || ||||| |||| || Sbjct 15848 ATCAAACGCTGTTGATCAGGAGGAATGCCCTCCTTGTCTTGAATCTTTTGCTTGACATTC 15907 Query 42138 GCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACA 42197 | | | || || || || || | ||||||||||| || || | ||||| ||| Sbjct 15908 TCAATACTATCAGAAGACTCAACTTCCAAAGTGATGGTTTTACCAGTCAAAGTCTTGACA 15967 Query 42198 AAGATTTGCAT 42208 || |||||||| Sbjct 15968 AAAATTTGCAT 15978 >seq4547 Length=1280 Score = 89.7 bits (98), Expect = 6e-13 Identities = 61/69 (88%), Gaps = 0/69 (0%) Strand=Plus/Plus Query 57012 CGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTATACTA 57071 |||| | ||| |||||| ||||||||||||||||||||| |||||||||||||||||| Sbjct 736 CGGCGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTATACTA 795 Query 57072 CCGAGGATT 57080 |||| |||| Sbjct 796 CCGAAGATT 804 >seq3189 Length=8009 Score = 89.7 bits (98), Expect = 6e-13 Identities = 61/69 (88%), Gaps = 0/69 (0%) Strand=Plus/Plus Query 57012 CGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTATACTA 57071 |||| | ||| |||||| ||||||||||||||||||||| |||||||||||||||||| Sbjct 7088 CGGCGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTATACTA 7147 Query 57072 CCGAGGATT 57080 |||| |||| Sbjct 7148 CCGAAGATT 7156 >seq2679 Length=5440 Score = 89.7 bits (98), Expect = 6e-13 Identities = 61/69 (88%), Gaps = 0/69 (0%) Strand=Plus/Plus Query 57012 CGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTATACTA 57071 |||| | ||| |||||| ||||||||||||||||||||| |||||||||||||||||| Sbjct 2872 CGGCGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTATACTA 2931 Query 57072 CCGAGGATT 57080 |||| |||| Sbjct 2932 CCGAAGATT 2940 >seq2600 Length=207564 Score = 89.7 bits (98), Expect = 6e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 41982 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 42041 || ||||||||||| || |||||||| | ||| |||||||| ||||| ||||| Sbjct 124522 CCACCTCTTAAACGTAATACCAAATGGAGTGTTGATTCCTTTTGTATATTATAATCGCTT 124463 Query 42042 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGC 42101 | || || | || ||||| || || ||||| || || |||| || || || | ||| Sbjct 124462 AATGTACGACCATCTTCTAGTTGTTTGCCAGCAAAGATAAGTCTTTGTTGATCTGGTGGA 124403 Query 42102 ACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACA 42161 | | || ||||| ||||| ||| | | | | || ||| ||||| || Sbjct 124402 ATACCTTCTTTGTCTTGAATTTTACTTTTCACATTATCAATGGTATCGGAAGATTCAACT 124343 Query 42162 TCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 || | ||||| |||||||| || || ||||| ||||| |||||||| Sbjct 124342 TCTAATGTGATTGTTTTGCCTGTAAGAGTCTTGACAAATATTTGCAT 124296 >seq2352 Length=4865 Score = 89.7 bits (98), Expect = 6e-13 Identities = 61/69 (88%), Gaps = 0/69 (0%) Strand=Plus/Plus Query 57012 CGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTATACTA 57071 |||| | ||| |||||| ||||||||||||||||||||| |||||||||||||||||| Sbjct 2505 CGGCGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTATACTA 2564 Query 57072 CCGAGGATT 57080 |||| |||| Sbjct 2565 CCGAAGATT 2573 >seq2345 Length=5455 Score = 89.7 bits (98), Expect = 6e-13 Identities = 61/69 (88%), Gaps = 0/69 (0%) Strand=Plus/Minus Query 57012 CGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTATACTA 57071 |||| | ||| |||||| ||||||||||||||||||||| |||||||||||||||||| Sbjct 501 CGGCGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTATACTA 442 Query 57072 CCGAGGATT 57080 |||| |||| Sbjct 441 CCGAAGATT 433 >seq1652 Length=1177 Score = 89.7 bits (98), Expect = 6e-13 Identities = 66/77 (86%), Gaps = 0/77 (0%) Strand=Plus/Minus Query 57004 TTTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCA 57063 || ||| |||| | ||| |||||| ||||||||||||||||||||| |||||||||| Sbjct 577 TTACTCTCCGGCGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCA 518 Query 57064 CTATACTACCGAGGATT 57080 |||||||||||| |||| Sbjct 517 CTATACTACCGAAGATT 501 >seq2936 Length=32062 Score = 87.8 bits (96), Expect = 2e-12 Identities = 60/68 (88%), Gaps = 0/68 (0%) Strand=Plus/Minus Query 57012 CGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTATACTA 57071 |||| | ||| |||||| ||||||||||||||||||||| |||||||||||||||||| Sbjct 31746 CGGCGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTATACTA 31687 Query 57072 CCGAGGAT 57079 |||| ||| Sbjct 31686 CCGAAGAT 31679 >seq1977 Length=1495 Score = 87.8 bits (96), Expect = 2e-12 Identities = 65/76 (86%), Gaps = 0/76 (0%) Strand=Plus/Minus Query 57003 TTTTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACC 57062 || |||| |||| | ||| |||||| ||||||||||||||||||||| ||||||||| Sbjct 450 TTATCTCTCCGGCGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACC 391 Query 57063 ACTATACTACCGAGGA 57078 ||||||||||||| || Sbjct 390 ACTATACTACCGAAGA 375 >seq1480 Length=2208 Score = 87.8 bits (96), Expect = 2e-12 Identities = 60/68 (88%), Gaps = 0/68 (0%) Strand=Plus/Minus Query 57012 CGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTATACTA 57071 |||| | ||| |||||| ||||||||||||||||||||| |||||||||||||||||| Sbjct 490 CGGCGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTATACTA 431 Query 57072 CCGAGGAT 57079 |||| ||| Sbjct 430 CCGAAGAT 423 >seq754 Length=772 Score = 87.8 bits (96), Expect = 2e-12 Identities = 68/81 (84%), Gaps = 0/81 (0%) Strand=Plus/Minus Query 56998 AAAAATTTTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 57057 ||||| | ||| |||| | ||| |||||| ||||||||||||||||||||| |||| Sbjct 235 AAAAAGTAACTCTCCGGCGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATAC 176 Query 57058 TCACCACTATACTACCGAGGA 57078 |||||||||||||||||| || Sbjct 175 TCACCACTATACTACCGAAGA 155 >seq2614 Length=127402 Score = 86.0 bits (94), Expect = 7e-12 Identities = 146/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 42000 ACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCT 42059 ||||| || | ||| ||||||||||| ||||| || | || || || | || || Sbjct 58937 ACCAAGTGGAGAGTGGATTCCTTTTGAATGTTGTAGTCTGAAAGGGTACGACCATCTTCG 58878 Query 42060 AGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATG 42119 || || |||||||| || ||||| || || ||||| | || | | |||||||| | Sbjct 58877 AGTTGTTTACCAGCAAAAATGAGACGTTGTTGGTCTGGAGGAATACCTTCCTTGTCTTGG 58818 Query 42120 ATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTG 42179 || ||||| || | | | | | || ||||| || || | ||||| || || Sbjct 58817 ATCTTTTGCTTTACATTTTCGATGCTATCAGAAGATTCGACTTCTAAAGTGATAGTCTTT 58758 Query 42180 CCCGTTAGCGTCTTTACAAAGATTTGCATTTT 42211 || || || |||||||||||||||||||| || Sbjct 58757 CCTGTAAGGGTCTTTACAAAGATTTGCATGTT 58726 >seq3185 Length=1536 Score = 84.2 bits (92), Expect = 2e-11 Identities = 70/86 (81%), Gaps = 0/86 (0%) Strand=Plus/Plus Query 56993 TTATGAAAAATTTTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGA 57052 ||| || ||| |||| |||| | ||| |||||| ||||||||||||||||||| | Sbjct 1122 TTAAGATGAATGATCTCTCCGGCGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCTGG 1181 Query 57053 CATACTCACCACTATACTACCGAGGA 57078 |||||||||||||||||||||| || Sbjct 1182 GATACTCACCACTATACTACCGAAGA 1207 >seq4299 Length=1722 Score = 82.4 bits (90), Expect = 8e-11 Identities = 60/70 (86%), Gaps = 0/70 (0%) Strand=Plus/Plus Query 57004 TTTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCA 57063 || ||| |||| | ||| |||||| ||||||||||||||||||||| |||||||||| Sbjct 1653 TTACTCTCCGGCGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCA 1712 Query 57064 CTATACTACC 57073 |||||||||| Sbjct 1713 CTATACTACC 1722 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 543181796129440