Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopus_20oryzae_20[genbank_20GCA_5F000697195.1_202014-06-02] 4,566 sequences; 42,900,422 total letters Query= NC_011423.1 Length=111724 Score E Sequences producing significant alignments: (Bits) Value seq2600 149 4e-31 seq2614 134 1e-26 seq2841 127 1e-24 seq1352 122 6e-23 seq2553 96.9 2e-15 >seq2600 Length=207564 Score = 149 bits (164), Expect = 4e-31 Identities = 172/230 (75%), Gaps = 4/230 (2%) Strand=Plus/Minus Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009 |||||||| ||||||| ||||||||||| || || || ||||| || || || || ||| Sbjct 124294 CCACCTCGTAATCTTAGCACTAAATGAAGAGTTGATTCCTTTTGAATATTATAGTCACTG 124235 Query 15010 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGA 15069 ||| | | | |||||||||||||||||||| | || | ||| ||||| || ||| Sbjct 124234 AGAGTACGACCATCTTCTAATTGTTTGCCAGCAAAGATGAGACGTTGTTGATCAGGAGGA 124175 Query 15070 ATTCCTTCCTTGTCACAAAT--TTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTA 15127 || |||||||| || ||| |||||||| || | || ||| |||| | ||| | Sbjct 124174 ATACCTTCCTTATCTTGAATCTTTTGCTTT--ACGTTATCGATACTATCAGAAGATTCAA 124117 Query 15128 CGTCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15177 | ||||| || || |||||||| || || || || ||||||||||||||| Sbjct 124116 CTTCTAAAGTGATAGTTTTACCAGTAAGGGTCTTGACAAAAATTTGCATA 124067 Score = 141 bits (156), Expect = 7e-29 Identities = 168/228 (74%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009 ||||||| || | ||| || ||||| || || || || |||||||| || |||||||| Sbjct 124522 CCACCTCTTAAACGTAATACCAAATGGAGTGTTGATTCCTTTTGTATATTATAATCGCTT 124463 Query 15010 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGA 15069 | | | | ||||||| |||||||||||| | || | | ||||| || |||| Sbjct 124462 AATGTACGACCATCTTCTAGTTGTTTGCCAGCAAAGATAAGTCTTTGTTGATCTGGTGGA 124403 Query 15070 ATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACG 15129 || ||||| ||||| |||||| ||||| ||| | || || |||||| | ||| || Sbjct 124402 ATACCTTCTTTGTCTTGAATTTTACTTTTCACATTATCAATGGTATCGGAAGATTCAACT 124343 Query 15130 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15177 ||||| || || ||||| ||||| ||||| || ||||| ||||||||| Sbjct 124342 TCTAATGTGATTGTTTTGCCTGTAAGAGTCTTGACAAATATTTGCATA 124295 >seq2614 Length=127402 Score = 134 bits (148), Expect = 1e-26 Identities = 158/212 (75%), Gaps = 4/212 (2%) Strand=Plus/Minus Query 14968 ACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCT 15027 || || ||||| || || |||||||| |||||||| || || | | | |||||| Sbjct 59393 ACCAAGTGAAGAGTGGATTCTTTTTGAATGTTGTAGTCTGAAAGGGTACGGCCATCTTCT 59334 Query 15028 AATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAA 15087 |||||||| ||||| | |||||||| |||||||| ||||| ||||||||||| | Sbjct 59333 AATTGTTTACCAGCAAAGATCAAACGTTGTTGGTCAGGAGGAATCCCTTCCTTGTCTTGA 59274 Query 15088 AT--TTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTT 15145 || |||||||| ||| |||| ||| |||| | || || ||||| || ||||||| Sbjct 59273 ATCTTTTGCTTT--ACATTTTCAATACTATCAGAAGACTCAACTTCTAAAGTGATGGTTT 59216 Query 15146 TACCTGTCAGAGTTTTTACAAAAATTTGCATA 15177 |||| || || ||||| || ||||| |||||| Sbjct 59215 TACCAGTAAGGGTTTTGACGAAAATCTGCATA 59184 Score = 109 bits (120), Expect = 4e-19 Identities = 153/213 (72%), Gaps = 4/213 (2%) Strand=Plus/Minus Query 14967 AACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTC 15026 ||| || || || || || || ||||| ||||||||||| || | | | | | ||||| Sbjct 59166 AACCAAGTGGAGAGTGGATTCCTTTTGAATGTTGTAATCACTCAAAGTACGACCATCTTC 59107 Query 15027 TAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACA 15086 | || || ||||| | |||||||| || || || ||||| ||||||||||| Sbjct 59106 GAGCTGCTTACCAGCAAAGATCAAACGTTGCTGATCAGGAGGAATACCTTCCTTGTCTTG 59047 Query 15087 AAT--TTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTT 15144 ||| ||||||| || | || ||| |||| | ||| || || |||||||||||| Sbjct 59046 AATCTTTTGCTTG--ACGTTCTCAATACTATCAGAAGATTCGACTTCCAAGGTAATGGTT 58989 Query 15145 TTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15177 ||||| || || ||||| || ||||| |||||| Sbjct 58988 TTACCAGTAAGGGTTTTGACGAAAATCTGCATA 58956 Score = 102 bits (112), Expect = 6e-17 Identities = 164/232 (71%), Gaps = 8/232 (3%) Strand=Plus/Minus Query 14967 AACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTC 15026 ||| || || || || || || ||||| |||||||| || || | | | ||||| Sbjct 58938 AACCAAGTGGAGAGTGGATTCCTTTTGAATGTTGTAGTCTGAAAGGGTACGACCATCTTC 58879 Query 15027 TAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTC--A 15084 | |||||| ||||| | || | ||| |||||||| ||||| ||||||||||| Sbjct 58878 GAGTTGTTTACCAGCAAAAATGAGACGTTGTTGGTCTGGAGGAATACCTTCCTTGTCTTG 58819 Query 15085 CAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTT 15144 | |||||| |||||| |||| || |||| | ||| || ||||| || || || Sbjct 58818 GATCTTTTGC--TTTACATTTTCGATGCTATCAGAAGATTCGACTTCTAAAGTGATAGTC 58761 Query 15145 TTACCTGTCAGAGTTTTTACAAAAATTTGCATATTTGAAATAAATTTTTTAA 15196 || ||||| || || |||||||| |||||||| ||| || ||||| |||| Sbjct 58760 TTTCCTGTAAGGGTCTTTACAAAGATTTGCATGTTT---AT-AATTTATTAA 58713 >seq2841 Length=27215 Score = 127 bits (140), Expect = 1e-24 Identities = 165/228 (72%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009 ||||||| || | ||| || |||||||| || || ||||||||||| |||||||| || Sbjct 25432 CCACCTCTTAAACGTAATACCAAATGAAGCGTTGATTCTTTTTGTATATTGTAATCACTT 25491 Query 15010 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGA 15069 | | | | ||||| | |||||| ||||| | || | | ||||| ||| ||| Sbjct 25492 AATGTACGACCCTCTTCAAGTTGTTTACCAGCAAAAATTAGTCTTTGTTGATCGGGTGGG 25551 Query 15070 ATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACG 15129 || ||||| || || |||||||||||| || | || || |||||| ||| || Sbjct 25552 ATACCTTCTTTATCTTGAATTTTGCTTTTCACGTTATCAATGGTATCGGAGGATTCAACT 25611 Query 15130 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15177 ||||| || || || || ||||| ||||| || ||||| ||||||||| Sbjct 25612 TCTAATGTGATTGTCTTGCCTGTAAGAGTCTTGACAAAGATTTGCATA 25659 Score = 116 bits (128), Expect = 3e-21 Identities = 166/234 (71%), Gaps = 6/234 (3%) Strand=Plus/Plus Query 14950 CCACCTCGCAATCTTAAA------ACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAA 15003 || ||| | ||||||||| || || ||||| || || ||||||||||| |||||| Sbjct 25660 CCGCCTAGTAATCTTAAACGTAATACCAATTGAAGCGTTGATTCTTTTTGTATATTGTAA 25719 Query 15004 TCGCTGAGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCG 15063 || || | | | | ||||| | |||||| ||||| | || | | ||||| ||| Sbjct 25720 TCACTTAATGTACGACCCTCTTCAAGTTGTTTACCAGCAAAAATTAGTCTTTGTTGATCG 25779 Query 15064 TTTGGAATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTT 15123 ||| || ||||| || || |||||||||||| || | || || |||||| | Sbjct 25780 GGTGGGATACCTTCTTTATCTTGAATTTTGCTTTTCACGTTATCAATGGTATCGGAGGAT 25839 Query 15124 TCTACGTCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15177 || || ||||| || || || || ||||| ||||| || ||||| ||||||||| Sbjct 25840 TCAACTTCTAATGTGATTGTCTTGCCTGTAAGAGTCTTGACAAAGATTTGCATA 25893 Score = 116 bits (128), Expect = 3e-21 Identities = 166/234 (71%), Gaps = 6/234 (3%) Strand=Plus/Plus Query 14950 CCACCTCGCAATCTTAAA------ACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAA 15003 || ||| | ||||||||| || || ||||| || || ||||||||||| |||||| Sbjct 25894 CCGCCTAGTAATCTTAAACGTAATACCAATTGAAGCGTTGATTCTTTTTGTATATTGTAA 25953 Query 15004 TCGCTGAGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCG 15063 || || | | | | ||||| | |||||| ||||| | || | | ||||| ||| Sbjct 25954 TCACTTAATGTACGACCCTCTTCAAGTTGTTTACCAGCAAAAATTAGTCTTTGTTGATCG 26013 Query 15064 TTTGGAATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTT 15123 ||| || ||||| || || |||||||||||| || | || || |||||| | Sbjct 26014 GGTGGGATACCTTCTTTATCTTGAATTTTGCTTTTCACGTTATCAATGGTATCGGAGGAT 26073 Query 15124 TCTACGTCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15177 || || ||||| || || || || ||||| ||||| || ||||| ||||||||| Sbjct 26074 TCAACTTCTAATGTGATTGTCTTGCCTGTAAGAGTCTTGACAAAGATTTGCATA 26127 >seq1352 Length=65141 Score = 122 bits (134), Expect = 6e-23 Identities = 156/213 (73%), Gaps = 4/213 (2%) Strand=Plus/Plus Query 14967 AACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTC 15026 ||| || |||||||| || || ||||| || ||||| || || | | | | ||||||| Sbjct 15085 AACCAAGTGAAGGGTGGATTCCTTTTGAATATTGTAGTCACTCAAAGTACGACCGTCTTC 15144 Query 15027 TAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACA 15086 |||||||| ||||| | |||||||||||||| || |||||||| ||||| || Sbjct 15145 CAATTGTTTACCAGCAAAGATCAAACGCTGTTGATCAGGAGGAATTCCCTCCTTATCTTG 15204 Query 15087 AA--TTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTT 15144 || |||||| || ||| | || || |||| | || || || || |||||||| Sbjct 15205 AATCTTTTGC--TTGACATTCTCAATGCTATCAGAAGACTCGACTTCCAAAGTAATGGTC 15262 Query 15145 TTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15177 ||||| || ||||| || || |||||||||||| Sbjct 15263 TTACCAGTGAGAGTCTTGACGAAAATTTGCATA 15295 Score = 100 bits (110), Expect = 2e-16 Identities = 151/213 (71%), Gaps = 4/213 (2%) Strand=Plus/Plus Query 14967 AACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTC 15026 ||| || || || ||||| || ||||| ||||| || || || | | | ||||| Sbjct 15313 AACCAAGTGGAGAGTAGATTCCTTTTGAATGTTATAGTCTGAAAGGGTGCGGCCATCTTC 15372 Query 15027 TAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACA 15086 | || || ||||| | |||||||||||||| || ||||| || |||||||| Sbjct 15373 AAGCTGCTTACCAGCAAAGATCAAACGCTGTTGATCAGGAGGAATGCCCTCCTTGTCTTG 15432 Query 15087 AA--TTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTT 15144 || |||||| || ||| | || ||| |||| | || || || || || |||||| Sbjct 15433 AATCTTTTGC--TTGACATTCTCAATACTATCAGAAGACTCAACTTCCAAAGTGATGGTT 15490 Query 15145 TTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15177 ||||| |||| ||| || ||||||||||||||| Sbjct 15491 TTACCAGTCAAAGTCTTGACAAAAATTTGCATA 15523 Score = 100 bits (110), Expect = 2e-16 Identities = 151/213 (71%), Gaps = 4/213 (2%) Strand=Plus/Plus Query 14967 AACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTC 15026 ||| || || || ||||| || ||||| ||||| || || || | | | ||||| Sbjct 15769 AACCAAGTGGAGAGTAGATTCCTTTTGAATGTTATAGTCTGAAAGGGTGCGGCCATCTTC 15828 Query 15027 TAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACA 15086 | || || ||||| | |||||||||||||| || ||||| || |||||||| Sbjct 15829 AAGCTGCTTACCAGCAAAGATCAAACGCTGTTGATCAGGAGGAATGCCCTCCTTGTCTTG 15888 Query 15087 AA--TTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTT 15144 || |||||| || ||| | || ||| |||| | || || || || || |||||| Sbjct 15889 AATCTTTTGC--TTGACATTCTCAATACTATCAGAAGACTCAACTTCCAAAGTGATGGTT 15946 Query 15145 TTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15177 ||||| |||| ||| || ||||||||||||||| Sbjct 15947 TTACCAGTCAAAGTCTTGACAAAAATTTGCATA 15979 Score = 95.1 bits (104), Expect = 9e-15 Identities = 150/213 (70%), Gaps = 4/213 (2%) Strand=Plus/Plus Query 14967 AACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTC 15026 ||| || || || || || || ||||| |||||||| || || | | | | ||||||| Sbjct 15541 AACCAAGTGGAGAGTGGATTCCTTTTGGATGTTGTAGTCACTCAAAGTGCGACCGTCTTC 15600 Query 15027 TAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACA 15086 |||||||| |||||| | || | ||| || || || ||||| || ||||| || Sbjct 15601 CAATTGTTTACCAGCGAAAATGAGACGTTGCTGATCAGGAGGAATGCCCTCCTTATCTTG 15660 Query 15087 AAT--TTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTT 15144 ||| ||||||| ||| | || || |||| | || || || || || ||||| Sbjct 15661 AATCTTTTGCTTG--ACATTCTCAATGCTATCAGAAGACTCGACTTCCAAAGTGATGGTC 15718 Query 15145 TTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15177 ||||| |||| ||| || || |||||||||||| Sbjct 15719 TTACCAGTCAAAGTCTTGACGAAAATTTGCATA 15751 Score = 95.1 bits (104), Expect = 9e-15 Identities = 150/213 (70%), Gaps = 4/213 (2%) Strand=Plus/Plus Query 14967 AACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTC 15026 ||| || || || || || || ||||| |||||||| || || | | | | ||||||| Sbjct 15997 AACCAAGTGGAGAGTGGATTCCTTTTGGATGTTGTAGTCACTCAAAGTGCGACCGTCTTC 16056 Query 15027 TAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACA 15086 |||||||| |||||| | || | ||| || || || ||||| || ||||| || Sbjct 16057 CAATTGTTTACCAGCGAAAATGAGACGTTGCTGATCAGGAGGAATGCCCTCCTTATCTTG 16116 Query 15087 AAT--TTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTT 15144 ||| ||||||| ||| | || || |||| | || || || || || ||||| Sbjct 16117 AATCTTTTGCTTG--ACATTCTCAATGCTATCAGAAGACTCGACTTCCAAAGTGATGGTC 16174 Query 15145 TTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15177 ||||| |||| ||| || || |||||||||||| Sbjct 16175 TTACCAGTCAAAGTCTTGACGAAAATTTGCATA 16207 >seq2553 Length=14598 Score = 96.9 bits (106), Expect = 2e-15 Identities = 101/132 (77%), Gaps = 2/132 (2%) Strand=Plus/Minus Query 14967 AACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTC 15026 ||| || |||||||| || || ||||| |||||||| ||||| | | | | ||||||| Sbjct 8204 AACCAAGTGAAGGGTGGATTCCTTTTGAATGTTGTAGTCGCTCAAAGTACGACCGTCTTC 8145 Query 15027 TAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACA 15086 ||||||||| || ||| | || | ||| |||||||| ||||| ||||||||||| Sbjct 8144 TAATTGTTTACCGGCGAAAATGAGACGTTGTTGGTCAGGAGGAATACCTTCCTTGTCTTG 8085 Query 15087 AA--TTTTGCTT 15096 || |||||||| Sbjct 8084 AATCTTTTGCTT 8073 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 357372111805310