Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopus_20oryzae_20[genbank_20GCA_5F000697195.1_202014-06-02] 4,566 sequences; 42,900,422 total letters Query= NC_011616.1 Length=148634 Score E Sequences producing significant alignments: (Bits) Value seq2614 116 4e-21 seq1352 107 2e-18 seq4556 104 2e-17 seq2600 89.7 5e-13 seq2841 86.0 6e-12 >seq2614 Length=127402 Score = 116 bits (128), Expect = 4e-21 Identities = 151/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 126905 ACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCT 126964 ||||| || | || || || |||||||| |||||||| | || || ||| ||| || Sbjct 59165 ACCAAGTGGAGAGTGGATTCCTTTTGAATGTTGTAATCACTCAAAGTACGACCATCTTCG 59106 Query 126965 AGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTG 127024 ||||| || ||||| ||||||| || |||||||| ||||| || || |||||||| Sbjct 59105 AGCTGCTTACCAGCAAAGATCAAACGTTGCTGATCAGGAGGAATACCTTCCTTGTCTTGA 59046 Query 127025 ATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTG 127084 || || ||||||| | || | | || | | |||||||| | ||| | ||||| Sbjct 59045 ATCTTTTGCTTGACGTTCTCAATACTATCAGAAGATTCGACTTCCAAGGTAATGGTTTTA 58986 Query 127085 CCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 || || || ||||| || ||||||||||| Sbjct 58985 CCAGTAAGGGTTTTGACGAAAATCTGCAT 58957 Score = 89.7 bits (98), Expect = 5e-13 Identities = 145/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 126905 ACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCT 126964 ||||| || | || || ||||||||||| ||||| || | || || ||| ||| Sbjct 59393 ACCAAGTGAAGAGTGGATTCTTTTTGAATGTTGTAGTCTGAAAGGGTACGGCCATCTTCT 59334 Query 126965 AGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTG 127024 | ||||| ||||| ||||||| || || || || ||||| || || |||||||| Sbjct 59333 AATTGTTTACCAGCAAAGATCAAACGTTGTTGGTCAGGAGGAATCCCTTCCTTGTCTTGA 59274 Query 127025 ATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTG 127084 || || ||||| | | ||| | | || | | ||| ||||| | || | ||||| Sbjct 59273 ATCTTTTGCTTTACATTTTCAATACTATCAGAAGACTCAACTTCTAAAGTGATGGTTTTA 59214 Query 127085 CCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 || || || ||||| || ||||||||||| Sbjct 59213 CCAGTAAGGGTTTTGACGAAAATCTGCAT 59185 >seq1352 Length=65141 Score = 107 bits (118), Expect = 2e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 ||||| || | || | ||||| || | ||||| || |||||||| || || || Sbjct 15296 CCACCACGAAGACGGAGAACCAAGTGGAGAGTAGATTCCTTTTGAATGTTATAGTCTGAA 15355 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | ||||| ||| || ||||| || ||||| ||||||| ||||| ||||| ||||| Sbjct 15356 AGGGTGCGGCCATCTTCAAGCTGCTTACCAGCAAAGATCAAACGCTGTTGATCAGGAGGA 15415 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACT 127066 |||||||||||||| || || ||||||| | || | | || | | ||| ||| Sbjct 15416 ATGCCCTCCTTGTCTTGAATCTTTTGCTTGACATTCTCAATACTATCAGAAGACTCAACT 15475 Query 127067 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 || | || | ||||| || |||| ||| || |||||||| ||||| Sbjct 15476 TCCAAAGTGATGGTTTTACCAGTCAAAGTCTTGACAAAAATTTGCAT 15522 Score = 107 bits (118), Expect = 2e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 ||||| || | || | ||||| || | ||||| || |||||||| || || || Sbjct 15752 CCACCACGAAGACGGAGAACCAAGTGGAGAGTAGATTCCTTTTGAATGTTATAGTCTGAA 15811 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | ||||| ||| || ||||| || ||||| ||||||| ||||| ||||| ||||| Sbjct 15812 AGGGTGCGGCCATCTTCAAGCTGCTTACCAGCAAAGATCAAACGCTGTTGATCAGGAGGA 15871 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACT 127066 |||||||||||||| || || ||||||| | || | | || | | ||| ||| Sbjct 15872 ATGCCCTCCTTGTCTTGAATCTTTTGCTTGACATTCTCAATACTATCAGAAGACTCAACT 15931 Query 127067 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 || | || | ||||| || |||| ||| || |||||||| ||||| Sbjct 15932 TCCAAAGTGATGGTTTTACCAGTCAAAGTCTTGACAAAAATTTGCAT 15978 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 ||||| || | || | ||||| || | || || || |||||||||||||| || | | Sbjct 15068 CCACCACGAAGACGGAGAACCAAGTGAAGGGTGGATTCCTTTTGAATATTGTAGTCACTC 15127 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | || ||| || || | ||||| ||||| ||||||| ||||| ||||| ||||| Sbjct 15128 AAAGTACGACCGTCTTCCAATTGTTTACCAGCAAAGATCAAACGCTGTTGATCAGGAGGA 15187 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACT 127066 || |||||||| || || || ||||||| | || | | | || | | ||||||| Sbjct 15188 ATTCCCTCCTTATCTTGAATCTTTTGCTTGACATTCTCAATGCTATCAGAAGACTCGACT 15247 Query 127067 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 || | || | || || || || ||||| || || ||||| ||||| Sbjct 15248 TCCAAAGTAATGGTCTTACCAGTGAGAGTCTTGACGAAAATTTGCAT 15294 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 ||||| || | || | ||||| || | || || || ||||| || ||||| || | | Sbjct 15524 CCACCACGAAGACGGAGAACCAAGTGGAGAGTGGATTCCTTTTGGATGTTGTAGTCACTC 15583 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | |||||| || || | ||||| |||||| | || | || |||||||| ||||| Sbjct 15584 AAAGTGCGACCGTCTTCCAATTGTTTACCAGCGAAAATGAGACGTTGCTGATCAGGAGGA 15643 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACT 127066 ||||||||||| || || || ||||||| | || | | | || | | ||||||| Sbjct 15644 ATGCCCTCCTTATCTTGAATCTTTTGCTTGACATTCTCAATGCTATCAGAAGACTCGACT 15703 Query 127067 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 || | || | || || || |||| ||| || || ||||| ||||| Sbjct 15704 TCCAAAGTGATGGTCTTACCAGTCAAAGTCTTGACGAAAATTTGCAT 15750 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 ||||| || | || | ||||| || | || || || ||||| || ||||| || | | Sbjct 15980 CCACCACGAAGACGGAGAACCAAGTGGAGAGTGGATTCCTTTTGGATGTTGTAGTCACTC 16039 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | |||||| || || | ||||| |||||| | || | || |||||||| ||||| Sbjct 16040 AAAGTGCGACCGTCTTCCAATTGTTTACCAGCGAAAATGAGACGTTGCTGATCAGGAGGA 16099 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACT 127066 ||||||||||| || || || ||||||| | || | | | || | | ||||||| Sbjct 16100 ATGCCCTCCTTATCTTGAATCTTTTGCTTGACATTCTCAATGCTATCAGAAGACTCGACT 16159 Query 127067 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 || | || | || || || |||| ||| || || ||||| ||||| Sbjct 16160 TCCAAAGTGATGGTCTTACCAGTCAAAGTCTTGACGAAAATTTGCAT 16206 >seq4556 Length=51470 Score = 104 bits (114), Expect = 2e-17 Identities = 302/458 (66%), Gaps = 13/458 (3%) Strand=Plus/Minus Query 47133 GCCGAACGTTTGATCGCTTTCGCCATCGTCGAGGGCGTCTTCTTCTCGGGCAGCTTTGCG 47192 || |||||| || |||| || ||| ||||| ||| ||||||| || ||| || || Sbjct 10029 GCTGAACGTCTGGTCGCCTTTGCCGCTGTCGAAGGCATCTTCTTTTCTGGCTCATTCGCC 9970 Query 47193 GCGATATTTTACATGAAAACCAAAGGAGTT--ATGCCCGGCCTCACGTTTAGCAACGAGC 47250 | || |||| | || | || | ||| |||||||| | || ||||| || || Sbjct 9969 TCCATCTTTTGGTTAAAGA--AACGTGGTTTGATGCCCGGTTTGACCTTTAGTAATGAAT 9912 Query 47251 TAATCTCGAGAGACGAAGGCCTGCACACCAACTTTGCCTGTCTCTACTACAACACTAGAG 47310 | |||| | || ||||| || ||||| ||||||||||||||| | || | | | Sbjct 9911 TGATCTGTCGTGATGAAGGTCTTCACACTGACTTTGCCTGTCTCTTGTTCACCC--ACAT 9854 Query 47311 TCGATCAAAAGTTGGACGTGCCCAC-CGTCAGCGACATGTTTGCCGAAGCCGTCGCCATT 47369 || | || | | | || ||||| ||||| ||| |||||||||| || Sbjct 9853 CCGTAAACAACCCAGTCAA--CAACGCGTCAAGGACATCATTGTAGAAGCCGTCGGTATC 9796 Query 47370 GAGATGGAGTTTTTCGCCGAGGCTCTGCCCGAATCTTTAGTGGGAATGAACGCGGAGATG 47429 || || || | | || |||||||| | | || | || |||||||| || Sbjct 9795 GAACAAGAATTCCTGTCGGATGCTCTGCCTGTTGCATTGATCGGTATGAACGCTACCTTG 9736 Query 47430 ATGAGAAAGTACATCGAATTTGTCGCCGACCGCCTGCTCGTTCAGCTAAAGTATCC--CA 47487 ||| | |||| |||||||| ||||| || || || | || ||| | || | || Sbjct 9735 ATGTGTCAGTATATCGAATTCGTCGCTGATCGTCTCATGGTC--GCTCTTGGATTCGACA 9678 Query 47488 AGATTTACCACACCGAGAATCCATTCGAGTTTATGAACAACATTTCGCTCGAGGGCAAGA 47547 |||||||| | | || |||||||| |||||| ||| || || || | ||||||| Sbjct 9677 AGATTTACAATGCTACTAACCCATTCGACTTTATGGACATGATCTCCCTTCAAGGCAAGA 9618 Query 47548 CCAACTTTTTCGAGAAGCGCGTCGGCGAATATAAACGT 47585 |||||||||| || ||||| || || ||| ||||| Sbjct 9617 CCAACTTTTTTGAAAAGCGTGTTTCTGATTATCAACGT 9580 >seq2600 Length=207564 Score = 89.7 bits (98), Expect = 5e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 ||||| ||||||| | ||| ||||| | || || || ||||||||||| || || | Sbjct 124294 CCACCTCGTAATCTTAGCACTAAATGAAGAGTTGATTCCTTTTGAATATTATAGTCACTG 124235 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | || ||| ||| |||| ||||| ||||| |||| | || || ||||| ||||| Sbjct 124234 AGAGTACGACCATCTTCTAATTGTTTGCCAGCAAAGATGAGACGTTGTTGATCAGGAGGA 124175 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACT 127066 || || ||||| || || || ||||| | | |||| | || | | || ||| Sbjct 124174 ATACCTTCCTTATCTTGAATCTTTTGCTTTACGTTATCGATACTATCAGAAGATTCAACT 124115 Query 127067 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 || | || | ||||| || || || || || |||||||| ||||| Sbjct 124114 TCTAAAGTGATAGTTTTACCAGTAAGGGTCTTGACAAAAATTTGCAT 124068 >seq2841 Length=27215 Score = 86.0 bits (94), Expect = 6e-12 Identities = 159/230 (69%), Gaps = 4/230 (2%) Strand=Plus/Plus Query 126886 TCCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCC 126945 |||||| | ||| || || |||||||| | ||| || |||||||| ||||||||||| | Sbjct 25431 TCCACCTCTTAAACGTAATACCAAATGAAGCGTTGATTCTTTTTGTATATTGTAATCACT 25490 Query 126946 CATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGG 127005 | || ||| || || || ||||| ||||| | || | || || |||||||| || Sbjct 25491 TAATGTACGACCCTCTTCAAGTTGTTTACCAGCAAAAATTAGTCTTTGTTGATCGGGTGG 25550 Query 127006 TATGCCCTCCTTGTCCGTGATTTTCTGC--TTGAGTTGTTCGACGGTGTCCGTACTCTCG 127063 || || || || | | ||| ||| ||| || | | || | ||| || | || Sbjct 25551 GATACCTTCTTTAT-CTTGAATTT-TGCTTTTCACGTTATCAATGGTATCGGAGGATTCA 25608 Query 127064 ACTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 ||||| | || | || ||||| || ||||| || ||||| || ||||| Sbjct 25609 ACTTCTAATGTGATTGTCTTGCCTGTAAGAGTCTTGACAAAGATTTGCAT 25658 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 475473660791840