Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopus_20oryzae_20[genbank_20GCA_5F000697195.1_202014-06-02] 4,566 sequences; 42,900,422 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq2429 86.0 1e-11 >seq2429 Length=29321 Score = 86.0 bits (94), Expect = 1e-11 Identities = 134/187 (72%), Gaps = 6/187 (3%) Strand=Plus/Minus Query 203882 CTCAGATAGTACATGCCGGTCTTTAGGCCCTTCTGCCACCCGTACATGTGCATGGAAGAC 203941 |||| |||||||||||| ||||||| || |||| ||| | || | ||||| |||| | Sbjct 16926 CTCAAATAGTACATGCCCGTCTTTAATCCTTTCTTCCAAGCATAGAAATGCATAGAAGTC 16867 Query 203942 AGTTTGCTCACGTTGGGGTCGGCCATGTGAAT--GTTCAGAGACTGGCTTTGGTCGATGA 203999 | || | | | || ||||| |||||| ||||| || || || || || | Sbjct 16866 AACTTTCCGAAACTTGGTTCGGC--AGTGAATAAGTTCATCGATTGAGACTGATCAAT-A 16810 Query 204000 AAGGCGCC-CGATCTGCGGCCATATTGATAATGGTCTTCTGCGAAATCTCCCACACCGTC 204058 |||| || || || || ||||||| |||||||| | |||||||| |||||||| ||| Sbjct 16809 TAGGCACCACGGTCAGCCGCCATATCAATAATGGTTCTTTGCGAAATTTCCCACACAGTC 16750 Query 204059 TTGAACA 204065 ||| ||| Sbjct 16749 TTGTACA 16743 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 795109816516960