Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopus_20oryzae_20[genbank_20GCA_5F000697195.1_202014-06-02] 4,566 sequences; 42,900,422 total letters Query= NC_013756.1 Length=368454 Score E Sequences producing significant alignments: (Bits) Value seq1352 136 9e-27 seq2614 132 1e-25 seq2600 111 4e-19 seq3863 105 2e-17 seq2553 96.9 8e-15 >seq1352 Length=65141 Score = 136 bits (150), Expect = 9e-27 Identities = 161/218 (74%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 ||||| | || || | ||||||||| || |||||||||| |||||||||| |||||| Sbjct 15530 CGAAGACGGAGAACCAAGTGGAGAGTGGATTCCTTTTGGATGTTGTAGTCACTCAAAGTG 15589 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | || ||||||| || || || ||||| |||||||| ||||| || ||| ||| || Sbjct 15590 CGACCGTCTTCCAATTGTTTACCAGCGAAAATGAGACGTTGCTGATCAGGAGGAATGCCC 15649 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588 || || |||||||||||||| || || | | | || | | || || ||||| Sbjct 15650 TCCTTATCTTGAATCTTTTGCTTGACATTCTCAATGCTATCAGAAGACTCGACTTCCAAA 15709 Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 ||||| |||||||| || | ||| || || |||||||| Sbjct 15710 GTGATGGTCTTACCAGTCAAAGTCTTGACGAAAATTTG 15747 Score = 136 bits (150), Expect = 9e-27 Identities = 161/218 (74%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 ||||| | || || | ||||||||| || |||||||||| |||||||||| |||||| Sbjct 15986 CGAAGACGGAGAACCAAGTGGAGAGTGGATTCCTTTTGGATGTTGTAGTCACTCAAAGTG 16045 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | || ||||||| || || || ||||| |||||||| ||||| || ||| ||| || Sbjct 16046 CGACCGTCTTCCAATTGTTTACCAGCGAAAATGAGACGTTGCTGATCAGGAGGAATGCCC 16105 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588 || || |||||||||||||| || || | | | || | | || || ||||| Sbjct 16106 TCCTTATCTTGAATCTTTTGCTTGACATTCTCAATGCTATCAGAAGACTCGACTTCCAAA 16165 Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 ||||| |||||||| || | ||| || || |||||||| Sbjct 16166 GTGATGGTCTTACCAGTCAAAGTCTTGACGAAAATTTG 16203 Score = 118 bits (130), Expect = 2e-21 Identities = 157/218 (72%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 ||||| | || || | ||| || || || |||||||| | ||||||||| |||||| Sbjct 15074 CGAAGACGGAGAACCAAGTGAAGGGTGGATTCCTTTTGAATATTGTAGTCACTCAAAGTA 15133 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | || ||||||| || || || || ||||| | |||||| || || ||| |||||| Sbjct 15134 CGACCGTCTTCCAATTGTTTACCAGCAAAGATCAAACGCTGTTGATCAGGAGGAATTCCC 15193 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588 || || |||||||||||||| || || | | | || | | || || ||||| Sbjct 15194 TCCTTATCTTGAATCTTTTGCTTGACATTCTCAATGCTATCAGAAGACTCGACTTCCAAA 15253 Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || |||||||| |||||||| || || |||||||| Sbjct 15254 GTAATGGTCTTACCAGTGAGAGTCTTGACGAAAATTTG 15291 Score = 114 bits (126), Expect = 3e-20 Identities = 156/218 (72%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 ||||| | || || | ||||||||| || |||||||| | ||| ||||| | | || Sbjct 15302 CGAAGACGGAGAACCAAGTGGAGAGTAGATTCCTTTTGAATGTTATAGTCTGAAAGGGTG 15361 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | |||||||| |||||||| || || ||||| | |||||| || || ||| ||| || Sbjct 15362 CGGCCATCTTCAAGCTGCTTACCAGCAAAGATCAAACGCTGTTGATCAGGAGGAATGCCC 15421 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588 || || |||||||||||||| || || | | || | | || || ||||| Sbjct 15422 TCCTTGTCTTGAATCTTTTGCTTGACATTCTCAATACTATCAGAAGACTCAACTTCCAAA 15481 Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 ||||| || ||||| || | ||| || ||||||||||| Sbjct 15482 GTGATGGTTTTACCAGTCAAAGTCTTGACAAAAATTTG 15519 Score = 114 bits (126), Expect = 3e-20 Identities = 156/218 (72%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 ||||| | || || | ||||||||| || |||||||| | ||| ||||| | | || Sbjct 15758 CGAAGACGGAGAACCAAGTGGAGAGTAGATTCCTTTTGAATGTTATAGTCTGAAAGGGTG 15817 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | |||||||| |||||||| || || ||||| | |||||| || || ||| ||| || Sbjct 15818 CGGCCATCTTCAAGCTGCTTACCAGCAAAGATCAAACGCTGTTGATCAGGAGGAATGCCC 15877 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588 || || |||||||||||||| || || | | || | | || || ||||| Sbjct 15878 TCCTTGTCTTGAATCTTTTGCTTGACATTCTCAATACTATCAGAAGACTCAACTTCCAAA 15937 Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 ||||| || ||||| || | ||| || ||||||||||| Sbjct 15938 GTGATGGTTTTACCAGTCAAAGTCTTGACAAAAATTTG 15975 >seq2614 Length=127402 Score = 132 bits (146), Expect = 1e-25 Identities = 160/218 (73%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 ||||| | || || | ||||||||| || |||||||| | |||||| ||| |||||| Sbjct 59177 CGAAGACGGAGAACCAAGTGGAGAGTGGATTCCTTTTGAATGTTGTAATCACTCAAAGTA 59118 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | |||||||| |||||||| || || ||||| | ||| ||||| || ||| ||| ||| Sbjct 59117 CGACCATCTTCGAGCTGCTTACCAGCAAAGATCAAACGTTGCTGATCAGGAGGAATACCT 59058 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588 || || |||||||||||||| ||| || | | || | | ||| || ||||| Sbjct 59057 TCCTTGTCTTGAATCTTTTGCTTGACGTTCTCAATACTATCAGAAGATTCGACTTCCAAG 58998 Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || || ||||| || || ||||| || ||||| || Sbjct 58997 GTAATGGTTTTACCAGTAAGGGTTTTGACGAAAATCTG 58960 Score = 123 bits (136), Expect = 6e-23 Identities = 158/218 (72%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 ||||| | || || | ||||||||| || |||||||| | ||||||||| | | || Sbjct 58949 CGAAGACGGAGAACCAAGTGGAGAGTGGATTCCTTTTGAATGTTGTAGTCTGAAAGGGTA 58890 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | |||||||| || || || || || || |||||||| || ||||| ||| ||| ||| Sbjct 58889 CGACCATCTTCGAGTTGTTTACCAGCAAAAATGAGACGTTGTTGGTCTGGAGGAATACCT 58830 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588 || || || ||||||||||| || ||||| | | || | | ||| || || || Sbjct 58829 TCCTTGTCTTGGATCTTTTGCTTTACATTTTCGATGCTATCAGAAGATTCGACTTCTAAA 58770 Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 ||||| ||||| || || || || || ||||| ||||| Sbjct 58769 GTGATAGTCTTTCCTGTAAGGGTCTTTACAAAGATTTG 58732 Score = 100 bits (110), Expect = 7e-16 Identities = 153/218 (70%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 ||||| | ||||| | ||| ||||| || || ||||| | ||||||||| | | || Sbjct 59405 CGAAGACGAAGGACCAAGTGAAGAGTGGATTCTTTTTGAATGTTGTAGTCTGAAAGGGTA 59346 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | |||||||| | || || || || ||||| | ||| || ||||| ||| ||| ||| Sbjct 59345 CGGCCATCTTCTAATTGTTTACCAGCAAAGATCAAACGTTGTTGGTCAGGAGGAATCCCT 59286 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588 || || |||||||||||||| || ||| | | || | | || || || || Sbjct 59285 TCCTTGTCTTGAATCTTTTGCTTTACATTTTCAATACTATCAGAAGACTCAACTTCTAAA 59226 Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 ||||| || ||||| || || ||||| || ||||| || Sbjct 59225 GTGATGGTTTTACCAGTAAGGGTTTTGACGAAAATCTG 59188 >seq2600 Length=207564 Score = 111 bits (122), Expect = 4e-19 Identities = 156/219 (71%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 199408 TCGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGT 199467 ||| | ||| || || | || ||||| || |||||||| | || |||||| | ||| Sbjct 124289 TCGTAATCTTAGCACTAAATGAAGAGTTGATTCCTTTTGAATATTATAGTCACTGAGAGT 124230 Query 199468 CCTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCC 199527 | |||||||| | || || || || ||||||||||| || || || ||| ||| || Sbjct 124229 ACGACCATCTTCTAATTGTTTGCCAGCAAAGATGAGACGTTGTTGATCAGGAGGAATACC 124170 Query 199528 TTCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAA 199587 ||| || |||||||||||||| ||| |||| | || | | ||| || || || Sbjct 124169 TTCCTTATCTTGAATCTTTTGCTTTACGTTATCGATACTATCAGAAGATTCAACTTCTAA 124110 Query 199588 CGTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 ||||| || ||||| || || || || ||||||||||| Sbjct 124109 AGTGATAGTTTTACCAGTAAGGGTCTTGACAAAAATTTG 124071 >seq3863 Length=144211 Score = 105 bits (116), Expect = 2e-17 Identities = 111/146 (76%), Gaps = 0/146 (0%) Strand=Plus/Plus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 ||||| | || || | ||| ||||| || |||||||| | |||||||||| ||| || Sbjct 119956 CGAAGACGGAGAACCAAGTGAAGAGTAGATTCCTTTTGAATGTTGTAGTCACTCAAGGTG 120015 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | |||||||||| || || |||||||| |||||||| || || || ||| ||| ||| Sbjct 120016 CGACCATCTTCCAATTGTTTACCGGCGAAAATGAGACGTTGTTGATCAGGAGGAATACCT 120075 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCAC 199554 || || |||||||||||||| || Sbjct 120076 TCCTTGTCTTGAATCTTTTGCTTGAC 120101 >seq2553 Length=14598 Score = 96.9 bits (106), Expect = 8e-15 Identities = 109/146 (75%), Gaps = 0/146 (0%) Strand=Plus/Minus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 ||||| | || || | ||| || || || |||||||| | ||||||||| |||||| Sbjct 8215 CGAAGACGGAGAACCAAGTGAAGGGTGGATTCCTTTTGAATGTTGTAGTCGCTCAAAGTA 8156 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | || ||||| | || || |||||||| |||||||| || ||||| ||| ||| ||| Sbjct 8155 CGACCGTCTTCTAATTGTTTACCGGCGAAAATGAGACGTTGTTGGTCAGGAGGAATACCT 8096 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCAC 199554 || || |||||||||||||| || Sbjct 8095 TCCTTGTCTTGAATCTTTTGCTTGAC 8070 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1178852630875922