Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopus_20oryzae_20[genbank_20GCA_5F000697195.1_202014-06-02] 4,566 sequences; 42,900,422 total letters Query= NC_013772.1 Length=176677 Score E Sequences producing significant alignments: (Bits) Value seq1352 107 2e-18 >seq1352 Length=65141 Score = 107 bits (118), Expect = 2e-18 Identities = 140/194 (72%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 46403 TCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAAT 46462 |||||||| || |||||||| || || ||||| | || || |||||||| || || || Sbjct 16244 TCCTTTTGAATGTTGTAGTCTGAAAGGGTGCGGCCATCTTCAAGCTGCTTACCAGCAAAG 16303 Query 46463 ATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTC 46522 ||||| || || || || | || | | |||||||| ||| || | ||||| | Sbjct 16304 ATCAAACGTTGTTGATCAGGAGGGATACCTTCCTTGTCTTGGATTTTTTGCTTGACGTTT 16363 Query 46523 GCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACA 46582 | | | || ||||| || |||| |||||||| ||||| || || ||||||||| Sbjct 16364 TCGATGCTATCAGAGGATTCGACCTCCAAAGTGATGGTCTTGCCAGTAAGTGTTTTAACA 16423 Query 46583 AAGATTTGCATTTT 46596 |||||||||||||| Sbjct 16424 AAGATTTGCATTTT 16437 Score = 96.9 bits (106), Expect = 4e-15 Identities = 136/191 (71%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 46403 TCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAAT 46462 |||||||| || || ||||| || || ||||| | || || |||||||| || || || Sbjct 15332 TCCTTTTGAATGTTATAGTCTGAAAGGGTGCGGCCATCTTCAAGCTGCTTACCAGCAAAG 15391 Query 46463 ATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTC 46522 ||||| ||||| || || | || | || ||||||||| ||||| | ||||| || Sbjct 15392 ATCAAACGCTGTTGATCAGGAGGAATGCCCTCCTTGTCTTGAATCTTTTGCTTGACATTC 15451 Query 46523 GCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACA 46582 | | | || || || || |||| ||||||||||| || |||| || || ||| Sbjct 15452 TCAATACTATCAGAAGACTCAACTTCCAAAGTGATGGTTTTACCAGTCAAAGTCTTGACA 15511 Query 46583 AAGATTTGCAT 46593 || |||||||| Sbjct 15512 AAAATTTGCAT 15522 Score = 96.9 bits (106), Expect = 4e-15 Identities = 136/191 (71%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 46403 TCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAAT 46462 |||||||| || || ||||| || || ||||| | || || |||||||| || || || Sbjct 15788 TCCTTTTGAATGTTATAGTCTGAAAGGGTGCGGCCATCTTCAAGCTGCTTACCAGCAAAG 15847 Query 46463 ATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTC 46522 ||||| ||||| || || | || | || ||||||||| ||||| | ||||| || Sbjct 15848 ATCAAACGCTGTTGATCAGGAGGAATGCCCTCCTTGTCTTGAATCTTTTGCTTGACATTC 15907 Query 46523 GCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACA 46582 | | | || || || || |||| ||||||||||| || |||| || || ||| Sbjct 15908 TCAATACTATCAGAAGACTCAACTTCCAAAGTGATGGTTTTACCAGTCAAAGTCTTGACA 15967 Query 46583 AAGATTTGCAT 46593 || |||||||| Sbjct 15968 AAAATTTGCAT 15978 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 565206139018320