Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopus_20oryzae_20[genbank_20GCA_5F000697195.1_202014-06-02] 4,566 sequences; 42,900,422 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq2389 212 7e-50 seq4556 109 6e-19 seq2429 93.3 5e-14 seq3946 86.0 7e-12 seq3782 86.0 7e-12 seq3781 86.0 7e-12 seq3720 86.0 7e-12 seq3477 86.0 7e-12 seq3440 86.0 7e-12 seq760 86.0 7e-12 seq647 86.0 7e-12 >seq2389 Length=30206 Score = 212 bits (234), Expect = 7e-50 Identities = 601/914 (66%), Gaps = 16/914 (2%) Strand=Plus/Plus Query 110229 TTCATGGAGTTTGTCGTAATCGAACGTTTTCGTCTCCTTATTGACATATTTGGGGAGAGC 110288 ||| |||||| | | | ||||| | | || ||| | ||| ||| | |||| | ||| Sbjct 12361 TTCGTGGAGTCTCTTGAAATCGTAAGATTC--TCTGTTGATT-ACAAAAGTGGGTAAAGC 12417 Query 110289 AATAGACGCAAGATTGCACACAGAAGTCTCGTCTTTGTCGGTGTATTCCAAAATTTCCGT 110348 |||||| || | || || |||| | || || || ||||| | ||||||||| Sbjct 12418 AATAGAAGCCAAGTTACAAACAGCAACTTCATCGGGACTTGTATATTCGACAATTTCCGT 12477 Query 110349 ACACAAGTTGGAACTCTTAATGACACCCAAGTTCTTCTGATT-CGATTTGGAGTTGCATG 110407 ||| | ||| || |||||| ||||||||| | |||||| | ||| | || || | Sbjct 12478 ACAAAGGTTACTACATTTAATGGTACCCAAGTTTTGCTGATTGCTCTTTCTA-TTACAAG 12536 Query 110408 CATCCTTATAGAGCATGTATGGGGTACCAGTTTCCGTCTGTGACTTGAGAATGGCCTTCC 110467 ||||||| |||||||| |||| |||| ||||| || |||| | | || || | || Sbjct 12537 CATCCTTGTAGAGCATAAATGGATTACCGGTTTCAGTTTGTGCTTCCAAGATAGCATACC 12596 Query 110468 ATACATCGGCGGCGGGGACAGTTGCGTTAGCGAGACCTTCCTCCTCGTACTTGGTGTACA 110527 ||| | || | || | | || |||||| | ||| | | | | || Sbjct 12597 ATAACTTTTGTGCCTTAATTGTCTCTCTCGCT----CTTCCTTCGCGTTCATAGCTTTCA 12652 Query 110528 ---AGT-CCTCAAATTCCTGTCCGTACACATCAGAAAGACCCTTCGCCTTGTCGGGACAG 110583 || || |||| || | || | ||||| | ||| || | | ||||| Sbjct 12653 TAAAGAGCCACAAACTCATCACCCCAAACATCTTGCAAACCAGGTGCTTCATTAGGACAA 12712 Query 110584 AAGAGGGACCAATTTCCACCCTCCTCAACCCTCTTCATGAACAGGTCAGGAATCCACATC 110643 ||||| ||||||| |||||| |||| || | | |||||| || || || | ||| | Sbjct 12713 AAGAGAGACCAATCTCCACCGTCCTTGACACGTTGCATGAAGAGATCGGGTACCCAAAGG 12772 Query 110644 GCCGAGAAAAGGTCACGGCAACGAGCCTCTTCATCACCTTGGTTGAGGCGTAGCTCCAAA 110703 || | || | |||||| | || || | ||| ||| | || || ||| Sbjct 12773 GCATAAAACAAATCACGGGCTCTGATTTCATCCTTACCAAAGTTCTTTCTTAAATCTAAA 12832 Query 110704 AAGTCCATGATATCCGAGTGCCATGGTTCGAGATAGACAGCGATGGATCCCTTACGACGA 110763 ||| | |||||| | |||||||| |||||||| | || | || ||| ||| Sbjct 12833 AAGGTAAAGATATCAGCATGCCATGGCTCGAGATACATGGCAAAGGCTCCTGGACGCTTG 12892 Query 110764 C--CCGCCTGGTTA-ACATAGCGTGCTGTGGCATTGAAGACCCTGAGCATAGGAATAATT 110820 |||||| | | ||||| ||||||||| |||||| || | | ||| |||| | Sbjct 12893 TTGCCGCCTTGATCGACATAACGTGCTGTGTTATTGAATACACGCAACATGGGAAGCAAA 12952 Query 110821 CCATCGGATTGACCATTTGTACCCCTAATTCTGGACTTATTGGCACGAATGTCGTGGATA 110880 || | || | |||||||||||| ||| ||| |||||||||||| | || || Sbjct 12953 CCGTTCGAATAACCATTTGTACCGGCAATATAGGATCCATTGGCACGAATATTATGAATG 13012 Query 110881 TGCATACCAATACCACCCGCCCACTTACTAATTTGTGCACACTCTGTGAGTGTACCATAA 110940 | | ||| |||||||| || || |||||| ||||| | | | ||| |||| Sbjct 13013 TTGAGACCGATACCACCTGCAGTTTTCGAAATTTGGGCACAGATTTTTAATGTTTCATAG 13072 Query 110941 ATACCATCAATCGAATCTGCCTTGTTGGCAATTAGAAAGCAAGAAGACATCTGAGGACGA 111000 || || ||||| |||||| |||| ||| | | |||||||| ||||||||||||||| Sbjct 13073 ATGCCTTCAATTGAATCTTCCTTCATGGTGAGCAAGAAGCAAGAGGACATCTGAGGACGA 13132 Query 111001 GGCGTTCCCGCATTGAAGAGTGTAGGTGTCGCATGAATGAACAGACCTTGGGACATCTTG 111060 || || || |||||||| | ||||| | |||||| | || | | ||||||| | Sbjct 13133 GGTGTACCGGCATTGAACAAAGTAGGACTGGCATGAGTAAAGAATTTCTCGGACATCAAG 13192 Query 111061 TTGTATGTGTCGAGTGCGGAGGGTACATCTTTACCGTGAATACCAATGGCAACTCGCATG 111120 ||||| || |||| ||| | | | ||||| |||||| ||||||||||| || |||||| Sbjct 13193 TTGTAAGTCTCGATTGCAGCGTCAATATCTTCACCGTGGATACCAATGGCGACACGCATG 13252 Query 111121 AACATATATTGAGG 111134 | | || |||||| Sbjct 13253 ATAAGATGTTGAGG 13266 >seq4556 Length=51470 Score = 109 bits (120), Expect = 6e-19 Identities = 160/222 (72%), Gaps = 6/222 (3%) Strand=Plus/Plus Query 119495 GGCAAATTCTTGATGAAGCCCTTCATCCCGAGAGATGAGCTCATTACTGAAG--CAAAGT 119552 |||||| || ||||| |||||||| ||| |||| | |||||||| ||| |||| Sbjct 9874 GGCAAAGTCAGTGTGAAGACCTTCATCACGACAGATCAATTCATTACTAAAGGTCAAA-- 9931 Query 119553 CCAGGCATGAGTCCTCTTTTCTTTAGCCAAAAGATGGCACAAAAACTTCCAGAAAAGAAG 119612 || ||||| | || | |||||||| ||||||||||| || |||||||||||| Sbjct 9932 CCGGGCATCAAACCACGTTTCTTTAACCAAAAGATGGAGGCGAATGAGCCAGAAAAGAAG 9991 Query 119613 ATGCCCTCCACACAGGCGAAAGCGAATAGACGCTCAGCAAAAG-GTCGAGACTTGTCGAA 119671 ||||| || ||| ||| || |||| ||||| |||||||| | ||| || || Sbjct 9992 ATGCCTTCGACAGCGGCAAAGGCGACCAGACGTTCAGCAAAGGATTCGTTGGATG-AGAT 10050 Query 119672 CCACTTGAGAGCCCAGTTGGCCTTACGCTCTATGCAGGGGAC 119713 ||| |||| ||||| | |||||||||| || ||||| || Sbjct 10051 CCATTTGAAGGCCCAATCTGCCTTACGCTTAATACAGGGAAC 10092 >seq2429 Length=29321 Score = 93.3 bits (102), Expect = 5e-14 Identities = 283/428 (66%), Gaps = 22/428 (5%) Strand=Plus/Minus Query 109413 ATAATACATACCCGTTTTGAGACCAGCCTTCCATGCGTACATATGCATTGAAGAGAGTTT 109472 ||| ||||| ||||| || | || |||||| || || | |||||| |||| | || Sbjct 16921 ATAGTACATGCCCGTCTTTAATCCTTTCTTCCAAGCATAGAAATGCATAGAAGTCAACTT 16862 Query 109473 G--GAAAGTGTCGGACTCTCCA-TAAACAAGTTCATCGACTGAGACTGATCGATGAATCG 109529 |||| | | || || | || ||||||||||| ||||||||||| || | Sbjct 16861 TCCGAAACTT---GGTTCGGCAGTGAATAAGTTCATCGATTGAGACTGATCAATATAGGC 16805 Query 109530 ACCACGATCAGCCGCCATGTCGATGATACACTTTTGGCTAATTTCCCAGACAGTCTTGTA 109589 |||||| ||||||||||| || || || |||| ||||||||| ||||||||||| Sbjct 16804 ACCACGGTCAGCCGCCATATCAATAATGGTTCTTTGCGAAATTTCCCACACAGTCTTGTA 16745 Query 109590 CAAATTCTTGATATCATCGGGAATGTCCACGATGTTTTGAATAGAGCCACC---AGCCTT 109646 ||| | ||||| || ||||| | |||| ||| ||| ||||| ||| | Sbjct 16744 CAATTCCTTGAGTCGATTAGGAATACCAGGGATGCGTTGTATACTTCCACCGTGAGCAAT 16685 Query 109647 CACCATGAGATCCTTCATCTCTTTCG-ACCAGAGACCGACCTTTTTGAGATCGTCAACAA 109705 || ||| || ||| || | | ||| ||| | || | | ||| || | || | Sbjct 16684 CATCAT---ATTCTTGATGT-TATCGTTCCACAACCCAAGGTCAACGAGCTCATTAAGCA 16629 Query 109706 GATGCTTGTTGACCACGACAAATTCACCAGCAAGTGTG----CGTCGGAGGTAGATGTTA 109761 | | ||| || || |||||||| || | || || || |||||||||| Sbjct 16628 AAAATTGGTTCACTACTTGGAATTCACC-GC---TTTGAACACGGCGTGTGTAGATGTTA 16573 Query 109762 GTCGTGTAGGGTTCGAAACACTCATTGTTGCCTAGGATTTGTGCAGTGGAAGCTGTGGGC 109821 ||||||| || ||||| || || ||||| |||| ||||| || |||||| ||| Sbjct 16572 CTCGTGTAAGGCTCGAAGCATTCGTTGTTACCTAATATTTGGCTGGTACTAGCTGTTGGC 16513 Query 109822 ATGGGAGC 109829 || ||||| Sbjct 16512 ATAGGAGC 16505 >seq3946 Length=52427 Score = 86.0 bits (94), Expect = 7e-12 Identities = 149/212 (70%), Gaps = 10/212 (5%) Strand=Plus/Plus Query 119507 ATGAAGCCCTTCATCCCGAGAGATGAGCTCATTACTGAAG--CAAAGTCCAGGCATGAGT 119564 |||||| ||||| || ||| | || | |||||||| || |||| || ||||| | Sbjct 26334 ATGAAGACCTTCGTCACGACAAATCAATTCATTACTAAAAGTCAAA--CCGGGCATCAAA 26391 Query 119565 CCTCTTTTCTTTAGCCAAAAGATGGCACAAAAACTTCCAGAAAAGAAGATGCCCTCCACA 119624 || | |||||| |||||||| || | | ||| || |||||||| || || || || Sbjct 26392 CCACGTTTCTTAAGCCAAAAAATAGAAGCAAATGAGCCGGAAAAGAATATACCTTCTACT 26451 Query 119625 CAGGCGAAAGCGAATAGACGCTCAGCAAAAG-GTCGAGACTTGTCGAA--CCACTTGAGA 119681 || ||||| | |||||||||||||| | || | | | ||| ||| |||| | Sbjct 26452 GCAGCAAAAGCAACAAGACGCTCAGCAAAGGAATC---ATTAGCAGAAATCCATTTGAAA 26508 Query 119682 GCCCAGTTGGCCTTACGCTCTATGCAGGGGAC 119713 ||||||| |||||||||| || ||||| || Sbjct 26509 GCCCAGTCAGCCTTACGCTTAATACAGGGAAC 26540 >seq3782 Length=6438 Score = 86.0 bits (94), Expect = 7e-12 Identities = 59/67 (88%), Gaps = 0/67 (0%) Strand=Plus/Minus Query 136717 TAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCCCGTT 136776 ||||||||||||||||||||||||||| |||||||||||||| || |||||| || ||| Sbjct 93 TAGCTCAGTTGGTTAGAGCGTGGTGCTAATAACGCCAAGGTCGCGAGTTCGACCCTCGTA 34 Query 136777 GGGAACA 136783 | || || Sbjct 33 GTGACCA 27 >seq3781 Length=210850 Score = 86.0 bits (94), Expect = 7e-12 Identities = 59/67 (88%), Gaps = 0/67 (0%) Strand=Plus/Minus Query 136717 TAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCCCGTT 136776 ||||||||||||||||||||||||||| |||||||||||||| || |||||| || ||| Sbjct 210380 TAGCTCAGTTGGTTAGAGCGTGGTGCTAATAACGCCAAGGTCGCGAGTTCGACCCTCGTA 210321 Query 136777 GGGAACA 136783 | || || Sbjct 210320 GTGACCA 210314 >seq3720 Length=806 Score = 86.0 bits (94), Expect = 7e-12 Identities = 59/67 (88%), Gaps = 0/67 (0%) Strand=Plus/Plus Query 136717 TAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCCCGTT 136776 ||||||||||||||||||||||||||| |||||||||||||| || |||||| || ||| Sbjct 287 TAGCTCAGTTGGTTAGAGCGTGGTGCTAATAACGCCAAGGTCGCGAGTTCGACCCTCGTA 346 Query 136777 GGGAACA 136783 | || || Sbjct 347 GTGACCA 353 >seq3477 Length=1641 Score = 86.0 bits (94), Expect = 7e-12 Identities = 59/67 (88%), Gaps = 0/67 (0%) Strand=Plus/Minus Query 136717 TAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCCCGTT 136776 ||||||||||||||||||||||||||| |||||||||||||| || |||||| || ||| Sbjct 1371 TAGCTCAGTTGGTTAGAGCGTGGTGCTAATAACGCCAAGGTCGCGAGTTCGACCCTCGTA 1312 Query 136777 GGGAACA 136783 | || || Sbjct 1311 GTGACCA 1305 >seq3440 Length=6884 Score = 86.0 bits (94), Expect = 7e-12 Identities = 59/67 (88%), Gaps = 0/67 (0%) Strand=Plus/Minus Query 136717 TAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCCCGTT 136776 ||||||||||||||||||||||||||| |||||||||||||| || |||||| || ||| Sbjct 6487 TAGCTCAGTTGGTTAGAGCGTGGTGCTAATAACGCCAAGGTCGCGAGTTCGACCCTCGTA 6428 Query 136777 GGGAACA 136783 | || || Sbjct 6427 GTGACCA 6421 >seq760 Length=798 Score = 86.0 bits (94), Expect = 7e-12 Identities = 59/67 (88%), Gaps = 0/67 (0%) Strand=Plus/Plus Query 136717 TAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCCCGTT 136776 ||||||||||||||||||||||||||| |||||||||||||| || |||||| || ||| Sbjct 271 TAGCTCAGTTGGTTAGAGCGTGGTGCTAATAACGCCAAGGTCGCGAGTTCGACCCTCGTA 330 Query 136777 GGGAACA 136783 | || || Sbjct 331 GTGACCA 337 >seq647 Length=800 Score = 86.0 bits (94), Expect = 7e-12 Identities = 59/67 (88%), Gaps = 0/67 (0%) Strand=Plus/Plus Query 136717 TAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCCCGTT 136776 ||||||||||||||||||||||||||| |||||||||||||| || |||||| || ||| Sbjct 298 TAGCTCAGTTGGTTAGAGCGTGGTGCTAATAACGCCAAGGTCGCGAGTTCGACCCTCGTA 357 Query 136777 GGGAACA 136783 | || || Sbjct 358 GTGACCA 364 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588942384194800