Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopus_20oryzae_20[genbank_20GCA_5F000697195.1_202014-06-02] 4,566 sequences; 42,900,422 total letters Query= NC_015280.1 Length=181044 Score E Sequences producing significant alignments: (Bits) Value seq4142 149 7e-31 >seq4142 Length=191379 Score = 149 bits (164), Expect = 7e-31 Identities = 441/675 (65%), Gaps = 14/675 (2%) Strand=Plus/Plus Query 154419 AAAGATTTCTCATTAGTAAATGGTATGGTTCCACTTGGCAGTTGCACAATGAAATTAAAT 154478 || ||| | || ||||| || ||| | | ||||| ||||| |||||||| || ||| Sbjct 86809 AAGGATCTTTCTTTAGTGCATTCCATGATCGCTCTTGGTAGTTGTACAATGAAGTTGAAT 86868 Query 154479 GCAGCAGCAGAACTAATGCCTGTGTCATGGGAAGAGTTTGCTAACGTGCATCCACATACA 154538 || | | ||| | || |||||| | ||| || || | || || ||||| | || Sbjct 86869 GCCACTTCTGAAATGATTCCTGTGACCTGGCCTGAATTCTCCAATGTCCATCCCTTTGCA 86928 Query 154539 CCTATGATACAGACCATGGGTTATCAGAAAATTATAGATGA-CTTACAGAAATGGTTATG 154597 ||| | ||| ||| ||||| | | || | ||||| ||| | || | | | Sbjct 86929 CCTGTAGAACAAACCCAAGGTTACCTCACTATGCTTGATGAACTTGCTGATGACTTGAAG 86988 Query 154598 TGATATCACAGGGTTTGATTCTATATCATTACAACCTAACGCAGGATCACAGGGTGAGTA 154657 || || || || ||||| | |||| | || || || | || | || ||||| || Sbjct 86989 -GAGATTACTGGATTTGAAGGTGTATCTCTTCAGCCCAATTCTGGTGCTCAAGGTGAATA 87047 Query 154658 TGCAGGACTGTTAGCAATCCAAGCATACCATCAAGGATCAGGAGATGATAAAAGAAATGT 154717 ||| || || | |||| || || || || | || |||||| | | ||||| Sbjct 87048 TGCTGGTCTTCGTGTCATCCGTGCTTATCACCATGCTCGCGGGGATGATCGACGTAATGT 87107 Query 154718 ATGTTTGATACCAGAGTCAGCACATGGAACTAATCCTGCTAGTGCTGTCATGGCAGGGAT 154777 ||| |||| || ||||| || || || |||||||| |||| |||| || || Sbjct 87108 ATGCCTGATTCCTATTTCAGCTCACGGCACAAATCCTGCATCAGCTGCCATGTGTGGTAT 87167 Query 154778 GAAAGTTGTAGGTGTCAAGTGTGATGATGATGGTAACATAGACATCAAAGATCTAGAGAA 154837 | | |||| ||| | |||||| |||| || ||| | || || ||||| || ||| Sbjct 87168 GGATATTGTCATTGTACAATGTGATAATGAAGGCAACTTGGATATGGAAGATTTAAAGAC 87227 Query 154838 GAAAGC-----AAT-CATGAATACATTTGAACTGTCATGTATTATGATTACATACCCATC 154891 ||| || ||| || | ||| ||| | || ||| ||||| || |||||| Sbjct 87228 GAAGGCTAAGAAATACAAGGATAGATTGGG--TGC----TATCATGATCACTTACCCAAG 87281 Query 154892 TACACATGGTGTATTTGAAACTAACATTAGACAGATATGTAAGATCGTTCATGACAATGG 154951 |||| |||| | ||||| | | || |||||| | || ||||| |||| Sbjct 87282 TACATTTGGTATGTTTGAGCCCGGTGTGTCTGAGGCATGTAAAGTTGTCCATGAACATGG 87341 Query 154952 TGGTCAGGTATATCTTGATGGAGCAAATCTAAATGCACAGGTAGGACTAGCAAAACCATG 155011 ||||| || ||||||||||| || || | ||||| || | || | | || || Sbjct 87342 TGGTCTTGTTTATCTTGATGGCGCCAACTTGAATGCTCAAATCGGCTTGACTAAGCCTGC 87401 Query 155012 TGAGTATGGTGCAGATGTATGTCATCTAAACTTACATAAAACATTCTGTATTCCACATGG 155071 ||| |||||| ||||| |||||| | ||||| || ||||| ||||||||||| ||||| Sbjct 87402 TGAAATTGGTGCTGATGTTTGTCATATGAACTTGCACAAAACCTTCTGTATTCCTCATGG 87461 Query 155072 AGGTGGAGGTCCTGG 155086 |||||||| ||||| Sbjct 87462 CGGTGGAGGACCTGG 87476 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 579179741429440