Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopus_20oryzae_20[genbank_20GCA_5F000697195.1_202014-06-02] 4,566 sequences; 42,900,422 total letters Query= NC_015284.1 Length=183806 Score E Sequences producing significant alignments: (Bits) Value seq4142 165 1e-35 >seq4142 Length=191379 Score = 165 bits (182), Expect = 1e-35 Identities = 453/689 (66%), Gaps = 14/689 (2%) Strand=Plus/Plus Query 159094 AAAGATTTCTCATTAGTAAATGGTATGGTTCCACTTGGTAGTTGTACTATGAAACTAAAC 159153 || ||| | || ||||| || ||| | | |||||||||||||| ||||| | || Sbjct 86809 AAGGATCTTTCTTTAGTGCATTCCATGATCGCTCTTGGTAGTTGTACAATGAAGTTGAAT 86868 Query 159154 GCAGCATCAGAACTGATGCCTGTGTCATGGGAAGAGTTTGCTAACGTGCATCCACATACA 159213 || | || ||| |||| |||||| | ||| || || | || || ||||| | || Sbjct 86869 GCCACTTCTGAAATGATTCCTGTGACCTGGCCTGAATTCTCCAATGTCCATCCCTTTGCA 86928 Query 159214 CCTATGATACAGACCATGGGTTATCAAAAAATTATAGATGA-CTTACAGAAATGGTTATG 159272 ||| | ||| ||| ||||| | | || | ||||| ||| | || | | | Sbjct 86929 CCTGTAGAACAAACCCAAGGTTACCTCACTATGCTTGATGAACTTGCTGATGACTTGAAG 86988 Query 159273 TGATATCACAGGGTTTGATTCTATATCATTACAACCTAACGCAGGATCACAGGGTGAGTA 159332 || || || || ||||| | |||| | || || || | || | || ||||| || Sbjct 86989 -GAGATTACTGGATTTGAAGGTGTATCTCTTCAGCCCAATTCTGGTGCTCAAGGTGAATA 87047 Query 159333 TGCAGGACTGTTAGCAATCCAAGCATACCATCAAGGATCAGGAGATGATAAAAGAAATGT 159392 ||| || || | |||| || || || || | || |||||| | | ||||| Sbjct 87048 TGCTGGTCTTCGTGTCATCCGTGCTTATCACCATGCTCGCGGGGATGATCGACGTAATGT 87107 Query 159393 ATGTTTGATACCAGAGTCAGCACATGGAACTAATCCTGCATCAGCAGTGATGGCAGGGAT 159452 ||| |||| || ||||| || || || |||||||||||||| | ||| || || Sbjct 87108 ATGCCTGATTCCTATTTCAGCTCACGGCACAAATCCTGCATCAGCTGCCATGTGTGGTAT 87167 Query 159453 GAAAGTTGTAGGTGTCAAGTGTGATGATGATGGCAACATAGACATCAAAGATCTAGAGAA 159512 | | |||| ||| | |||||| |||| |||||| | || || ||||| || ||| Sbjct 87168 GGATATTGTCATTGTACAATGTGATAATGAAGGCAACTTGGATATGGAAGATTTAAAGAC 87227 Query 159513 GAAAGC-----AAT-CATGAATACATTTGAACTGTCATGTATTATGATTACATATCCATC 159566 ||| || ||| || | ||| ||| | || ||| ||||| || || ||| Sbjct 87228 GAAGGCTAAGAAATACAAGGATAGATTGGG--TGC----TATCATGATCACTTACCCAAG 87281 Query 159567 TACACATGGTGTATTTGAAACAAACATCAGACAGATATGTAAGATTGTTCATGAGAATGG 159626 |||| |||| | ||||| | | || |||||| |||| ||||| |||| Sbjct 87282 TACATTTGGTATGTTTGAGCCCGGTGTGTCTGAGGCATGTAAAGTTGTCCATGAACATGG 87341 Query 159627 TGGTCAGGTATATCTTGATGGTGCAAATCTAAATGCACAGGTAGGTCTAGCAAAACCATG 159686 ||||| || ||||||||||| || || | ||||| || | || | | || || Sbjct 87342 TGGTCTTGTTTATCTTGATGGCGCCAACTTGAATGCTCAAATCGGCTTGACTAAGCCTGC 87401 Query 159687 TGACTATGGTGCAGATGTATGTCATCTAAACTTACATAAGACATTCTGTATTCCACATGG 159746 ||| |||||| ||||| |||||| | ||||| || || || ||||||||||| ||||| Sbjct 87402 TGAAATTGGTGCTGATGTTTGTCATATGAACTTGCACAAAACCTTCTGTATTCCTCATGG 87461 Query 159747 AGGTGGAGGTCCTGGCGTAGGTCCTATTG 159775 |||||||| ||||| | || || |||| Sbjct 87462 CGGTGGAGGACCTGGTATGGGCCCCATTG 87490 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588017636977760