Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopus_20oryzae_20[genbank_20GCA_5F000697195.1_202014-06-02] 4,566 sequences; 42,900,422 total letters Query= NC_019401.1 Length=358663 Score E Sequences producing significant alignments: (Bits) Value seq2699 109 1e-18 >seq2699 Length=81333 Score = 109 bits (120), Expect = 1e-18 Identities = 276/412 (67%), Gaps = 16/412 (4%) Strand=Plus/Plus Query 150404 GGTGAACCAGGTGTTGGTAAAACACAAATCGTTGACGGATTAGCACAACGCATCGCTAAT 150463 |||||||| ||||| || |||||| || || || || | || | || ||| | | Sbjct 75518 GGTGAACCTGGTGTGGGCAAAACAGCGATTGTCGAAGGTCTGGCCCGTCGGATCATTGAA 75577 Query 150464 GGTGATGTTCCAGATTCTATGAAAGATGTTGAAATTCTTTCTTTGAATATGGGTGCATTT 150523 ||||||| || | ||| || || || || | |||| | | |||||||| || Sbjct 75578 CGTGATGTGCCTCAGTCTTTGCAA--TGCA-AACTGTTTTCGCTTGACATGGGTGCCTTG 75634 Query 150524 ACTGCTGGTACTAAGTATCGTGGTGAATTCGAAGAACGTGTAGA--CAATTTGCTACAAG 150581 | ||||||| | || || || ||||| || ||||||||| || | || ||| | | | Sbjct 75635 ATTGCTGGTGCAAAATACCGCGGTGAGTTTGAAGAACGTCTAAAGGCAGTTT--TGAAGG 75692 Query 150582 AACTAAAAGAACGCGATGATGTTAT--TCT-GTTCATCGATGAAATCCATACTATTATGG 150638 || | ||||| || || | ||| ||| ||| || |||||||||||||| | ||| Sbjct 75693 AAGTGAAAGAGTCTGAAGAAGGTATCATCTTGTTTATTGATGAAATCCATACGGTCTTGG 75752 Query 150639 GTGCTGGTGCGACTGGCGGCGGTTCTTTGGATATGAGCAATATGTTAAAACCTGCTCTAT 150698 | |||||| | |||| || ||| |||| |||| || | ||||| ||| Sbjct 75753 GAGCTGGT---AAAGGCGAAGGCTCTATGGACGCTGCCAATCTGCTGAAACCAATGCTAG 75809 Query 150699 CTCGCGGTGAAATTCGTGTCATCGGTGCAACAACCTACGATGAATATCGTAAACACATTG 150758 ||||||||||| | ||| || ||||| || |||| |||||| ||| | |||| Sbjct 75810 CTCGCGGTGAACTGCGTTGTATTGGTGCGACTACCTTGACTGAATACCGT---GAGATTG 75866 Query 150759 AAAAAGATGCAGCACTACAGCGTCGTTTCATGAAGGTTGATATTGTTGAACC 150810 |||| ||| | || | | ||||||||| ||||| ||| | | ||||| Sbjct 75867 AAAAGGATCCTGCTTTTGAACGTCGTTTCCAAAAGGTGGATGTGGGCGAACC 75918 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1147523263809868