Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopus_20oryzae_20[genbank_20GCA_5F000697195.1_202014-06-02] 4,566 sequences; 42,900,422 total letters Query= NC_020842.1 Length=79114 Score E Sequences producing significant alignments: (Bits) Value seq2429 129 3e-25 >seq2429 Length=29321 Score = 129 bits (142), Expect = 3e-25 Identities = 269/401 (67%), Gaps = 0/401 (0%) Strand=Plus/Minus Query 25962 AAAATAAATCTCTCGCTCTCATTTCTTCTTTTCCGTGATTCTTTTTTAGATCTAAGAAAT 26021 |||||||||| | || | ||||||||| |||| || ||| | | |||||| || | Sbjct 15523 AAAATAAATCGCGAGCACGCATTTCTTCGGCACCGTTGTTTTTTCTCAAATCTAAAAAGT 15464 Query 26022 CAAAAATATCTGAGTGCCATGGTTCTAAATAGATAGCAAAACTACCTTTTCTTTTTCCTC 26081 |||| | ||| ||||| || || || || || |||||| | || || | ||| || | Sbjct 15463 CAAAGACATCCACATGCCAAGGCTCCAAGTACATGGCAAAATTTCCATTACGTTTACCAC 15404 Query 26082 CACCTTGATCTACGTATCTTGCAGTTTCATTGAAAACTTTCAACATTGGAACTAATCCAG 26141 ||||||| ||| | | |||||| ||||| |||||| ||| ||| |||| || ||| Sbjct 15403 CACCTTGGGTTACAAAACGTGCAGTATCATTAAAAACTCTCAGCATAGGAATTACGCCAT 15344 Query 26142 TTGAAAATCCGTTTGTGCTATGAATCTTGGATCCTGTCGATCTAATATCGTGAGCATGAA 26201 | ||| ||||| || | | ||| | || |||| | ||| | || ||| || Sbjct 15343 TAGAAGTACCGTTGGTTCCAGCAATGTAAGAGCCTGAGCCACGAATTTTTTGTGCAGCAA 15284 Query 26202 TACCGATTCCACCAGCCCATTTTGAAATAGCTGCACAATCTGAAACTGTATCGAAAATTC 26261 || | |||||||| |||||| ||| ||||| | | ||||||| | || | Sbjct 15283 CGCCTACGCCACCAGCTGCTTTTGATATACGCGCACAGGTGGTGAGTGTATCGTAGATAC 15224 Query 26262 CTTTTATGCTATCACCTTTCATTCCTAATAAAAAACAAGAAGATAATTGCGAATGAGTTG 26321 ||| || ||||| | |||| | ||| |||||| ||| | || | | || Sbjct 15223 CTTCAATACTATCTTCGCGCATTTGAACTAAGAAACAACTAGAGAGCTGAGGTCTGGGTG 15164 Query 26322 TTCCTGAATTAAATAATGTCGGTGTAGCATGAGTATAATAT 26362 | || | |||||| || || ||||||||||||||| | ||| Sbjct 15163 TACCAGCATTAAACAAGGTAGGTGTAGCATGAGTAAAGTAT 15123 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 253025918798450