Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopus_20oryzae_20[genbank_20GCA_5F000697195.1_202014-06-02] 4,566 sequences; 42,900,422 total letters Query= NC_020845.1 Length=180977 Score E Sequences producing significant alignments: (Bits) Value seq4142 149 7e-31 >seq4142 Length=191379 Score = 149 bits (164), Expect = 7e-31 Identities = 489/754 (65%), Gaps = 22/754 (3%) Strand=Plus/Minus Query 138187 CAATAGGACCTACGCCAGGACCTCCACCTCCATGTGGAATACAGAATGTCTTATGTAAAT 138246 |||| || || | ||||| |||||||| ||||| ||||||||||| || || || || | Sbjct 87490 CAATGGGGCCCATACCAGGTCCTCCACCGCCATGAGGAATACAGAAGGTTTTGTGCAAGT 87431 Query 138247 TTAGATGACATACATCTGCACCATAGTCACATGGTTTTGCTAGACCTACCTGTGCATTTA 138306 | | |||||| ||||| |||||| ||| || || | | || | || ||||| | Sbjct 87430 TCATATGACAAACATCAGCACCAATTTCAGCAGGCTTAGTCAAGCCGATTTGAGCATTCA 87371 Query 138307 GATTTGCACCATCGAGATATACCTGACCACCATTGTCATGAACGATCTTACATATCTGTC 138366 || || ||||| ||||| || ||||||||| ||||| || | |||||| || Sbjct 87370 AGTTGGCGCCATCAAGATAAACAAGACCACCATGTTCATGGACAACTTTACATGCCTCAG 87311 Query 138367 TGATGTTTGTTTCAAATACACCATGAGTCGATGGATATGTAATCATAATA-CATGAGAGT 138425 | | ||||| | |||| || ||| || || ||||| ||| || Sbjct 87310 ACACACCGGGCTCAAACATACCAAATGTACTTGGGTAAGTGATCATGATAGCAC------ 87257 Query 138426 TCAAATGTATTCATG-ATTGCTT-----TCTTCTCTAGATCTTTGATGTCTATGTTGCCA 138479 | ||| ||| | || ||| ||| || ||| || ||||| || || | |||||| Sbjct 87256 -CCAATCTATCCTTGTATTTCTTAGCCTTCGTCTTTAAATCTTCCATATCCAAGTTGCCT 87198 Query 138480 TCATCATCACACTTGACACCTACAACTTTCATTCCTGCCATGACTGCACTAGCAGGATTA 138539 |||| |||||| | ||| |||| | ||| || |||| | || |||||||| Sbjct 87197 TCATTATCACATTGTACAATGACAATATCCATACCACACATGGCAGCTGATGCAGGATTT 87138 Query 138540 GTTCCATGTGCTGACTCTGGTATCAGACATACATTTCTTTTATCATCTCCTGATCCTTGA 138599 || || || ||||| || ||||| |||||||| | | |||||| || | || Sbjct 87137 GTGCCGTGAGCTGAAATAGGAATCAGGCATACATTACGTCGATCATCCCCGCGAGCATGG 87078 Query 138600 TGATATGCTTGGATTGCTAACAGTCCTGCATACTCACCCTGTGATCCTGCGTTAGGTTGT 138659 ||||| || |||| | || || ||||| ||||| || | || | || || || Sbjct 87077 TGATAAGCACGGATGACACGAAGACCAGCATATTCACCTTGAGCACCAGAATTGGGCTGA 87018 Query 138660 AATGATATAGAATCAAAACCTGTGATATCACATAACCATTTCTGTAAGT-CATCTATTAT 138718 | |||| | ||||| || || || || | | | || | |||| |||| | || Sbjct 87017 AGAGATACACCTTCAAATCCAGTAATCTC-CTTCAAGTCATCAGCAAGTTCATCAAGCAT 86959 Query 138719 CTTTTGATAACCCATGGTCTGTATCATAGGTGTATGTGGATGCACGTTGGCAAATTCTTC 138778 | | ||||| ||| ||| | ||||| | ||||| || |||| ||||| Sbjct 86958 AGTGAGGTAACCTTGGGTTTGTTCTACAGGTGCAAAGGGATGGACATTGGAGAATTCAGG 86899 Query 138779 CCATGACACAGGCATCAGTTCTGCTGCTGCATTTAGTTTCATTGTGCAACTACCAAGTGG 138838 ||| | |||||| |||| ||| | | ||||| | |||||||| ||||||||||| | Sbjct 86898 CCAGGTCACAGGAATCATTTCAGAAGTGGCATTCAACTTCATTGTACAACTACCAAGAGC 86839 Query 138839 AACCATACCATTTACTAATGAGAAATCTTTAGAGCAT---AACTCATAGATATATCTCAT 138895 | ||| || ||||| || | ||| || || | | | || ||||| | | Sbjct 86838 GATCATGGAATGCACTAAAGAAAGATCCTT---GCTTTCAAGATGATGAATATAACGAAG 86782 Query 138896 CATGTCAGTTTCACTGTGATACTTATTGAATACT 138929 ||| |||||||| ||| || |||||||||| Sbjct 86781 CATTTCAGTTTCTGAGTGGTAGGAATTGAATACT 86748 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 578965353666320