Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopus_20oryzae_20[genbank_20GCA_5F000697195.1_202014-06-02] 4,566 sequences; 42,900,422 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq2389 224 1e-53 seq4556 116 4e-21 seq3345 109 7e-19 seq3946 104 3e-17 seq2614 91.5 2e-13 seq2429 87.8 2e-12 >seq2389 Length=30206 Score = 224 bits (248), Expect = 1e-53 Identities = 560/843 (66%), Gaps = 13/843 (2%) Strand=Plus/Minus Query 75225 TCATGCGGGTCGCAATCGGCATCCACGGGGAAGACATTGATTCTGTCTTGGAGACATACG 75284 ||||||| ||||| || || |||||||| ||||| ||||| ||| | ||||| ||| Sbjct 13253 TCATGCGTGTCGCCATTGGTATCCACGGTGAAGATATTGACGCTGCAATCGAGACTTACA 13194 Query 75285 ACAAGATGTCCCAAGGTATGTTCATTCACGCAACACCAACCCTCTTCAATGCTGGTACAC 75344 || ||||||| | | || | ||| || | || || | |||||||| ||||||| Sbjct 13193 ACTTGATGTCCGAGAAATTCTTTACTCATGCCAGTCCTACTTTGTTCAATGCCGGTACAC 13134 Query 75345 CAAGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGACTCAATCAACGGTA 75404 | | || ||||||||| ||||||| | || ||| ||||| || ||||| | || | Sbjct 13133 CTCGTCCTCAGATGTCCTCTTGCTTCTTGCTCACCATGAAGGAAGATTCAATTGAAGGCA 13074 Query 75405 TCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTGGGGGTATTGGGATGC 75464 |||||| ||| | | ||||| ||||| || || || || ||||| || | Sbjct 13073 TCTATGAAACATTAAAAATCTGTGCCCAAATTTCGAAAACTGCAGGTGGTATCGGTCTCA 13014 Query 75465 ACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGGGACAAATGGTCAATCAGATG 75524 |||| ||| || | | |||||| ||| |||| || ||||||||| | || | | Sbjct 13013 ACATTCATAATATTCGTGCCAATGGATCCTATATTGCCGGTACAAATGGTTATTCGAACG 12954 Query 75525 GTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGTAAATCAAGCGGG-- 75582 || | |||| ||| | || ||||| || |||||| || ||||| |||||| || Sbjct 12953 GTTTGCTTCCCATGTTGCGTGTATTCAATAACACAGCACGTTATGTCGATCAAGGCGGCA 12894 Query 75583 ----GCGTCGCAAGGGGTCCATCGCGGTCTACTTGGAACCATGGCATGCCGATATCATGG 75638 ||||| ||| | || | || | || | || ||||||||||| |||||| | Sbjct 12893 ACAAGCGTCC--AGGAG-CCTTTGCCATGTATCTCGAGCCATGGCATGCTGATATCTTTA 12837 Query 75639 AGTTCCTTGAGTTACGACTCAACCAAGGTGACGAAGAGGCTCGGTG-TAGAGATCTCTTT 75697 || | || ||| || ||| ||| | || || || | | | ||| | ||| Sbjct 12836 CCTTTTTAGATTTAAGAAAGAACTTTGGTAAGGATGA-AATCAGAGCCCGTGATTTGTTT 12778 Query 75698 TCATCCCTGTGGATTCCAGACCTTTTCATGAAGCGGGTTGAGGAGGGTGGTCAATGGTCT 75757 | |||| ||| | || || || |||||| | || || |||| ||||| | |||||| Sbjct 12777 TATGCCCTTTGGGTACCCGATCTCTTCATGCAACGTGTCAAGGACGGTGGAGATTGGTCT 12718 Query 75758 CTTTTCTGTCCAGACAAGGCACCAGGTCTCTCCGACGCGGTGGGTGAGGAGTTTGAAGCC 75817 || || ||||| | | ||||| ||| | || | |||||| ||||||| || Sbjct 12717 CTCTTTTGTCCTAATGAAGCACCTGGTTTGCAAGATGTTTGGGGTGATGAGTTTGTGGCT 12658 Query 75818 CTCTACACAAAGTATGAAGAGGAGGGTAGAGCCAATGCGACTGTACCAGCCGCCGATGTT 75877 || || || |||||| || || ||||| | | ||| | || | | | ||| Sbjct 12657 CTTTATGAAAGCTATGAACGCGAAGGAAGAGCGAGAGAGACAAT-TAAGGCACAAAAGTT 12599 Query 75878 -TGGAAGGCTATTCTCAAATCACAGACGGAGACTGGAACACCATATATGCTTTACAAGGA 75936 ||| | ||||| | || |||| || || || || | |||| |||||| |||||||| Sbjct 12598 ATGGTATGCTATCTTGGAAGCACAAACTGAAACCGGTAATCCATTTATGCTCTACAAGGA 12539 Query 75937 TGCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGAACAATCAAGAGCTCAAATCTTTG 75996 ||||||||| | ||||| || || | || ||||| || || || | || ||||| Sbjct 12538 TGCTTGTAATAGAAAGAGCAATCAGCAAAACTTGGGTACCATTAAATGTAGTAACCTTTG 12479 Query 75997 CACGGAAATTTTAGAGTACACAGATAAGGATGAGACGGCTGTTTGCAATTTGGCATCAAT 76056 ||||||||| | || || ||| | ||||| |||||||| || ||||| || || Sbjct 12478 TACGGAAATTGTCGAATATACAAGTCCCGATGAAGTTGCTGTTTGTAACTTGGCTTCTAT 12419 Query 76057 CGC 76059 || Sbjct 12418 TGC 12416 Score = 105 bits (116), Expect = 8e-18 Identities = 262/392 (67%), Gaps = 7/392 (2%) Strand=Plus/Minus Query 76188 GAAAG-TCTAATATGCGACACAGACCTATTGGTTTGGGTGTTCAAGGTCTCGCGGATGTA 76246 ||||| || || | | |||| | ||||| ||||| ||||| ||||| | || || | Sbjct 12230 GAAAGATCAAACAAGAGACATCGTCCTATCGGTTTAGGTGTCCAAGGATTAGCCGACACA 12171 Query 76247 TTTATTTTGTGCCGCTACGCATTTGATTCAGATGAAGCCAAGGAGATGAATGCTCGTATC 76306 || || | || ||| | ||||| || ||||||||| | | ||| || ||| Sbjct 12170 TTCATGGCCTTACGTTACCCCTTTGACTCTCCTGAAGCCAAACAATTAAATATTCAAATC 12111 Query 76307 TTTGAAACCATGTATCACGCATCCCTGGAGGCGAGTTGTGAATTGGCTGAAGCCCAAGGT 76366 ||||||||||| |||||||| || |||| || || |||||||||||| | || Sbjct 12110 TTTGAAACCATCTATCACGCTGCCTTGGAAGCCTCATGCGAATTGGCTGAAAAGTACGGA 12051 Query 76367 TCCTATGAGACATTTGAGGGTTCTCCCGCGTCCCAAGGGGTGCTTCAGTTTGATATGTGG 76426 | ||||| || | ||||||| ||| | ||| | || | | || | || |||| | Sbjct 12050 CCTTATGAAACTTATGAGGGTAGTCCTGTATCCAAGGGCATATTACAATACGACATGT-G 11992 Query 76427 GAAGGTGAAACCAAGCTC-AACTACGACTGGGATGTTCTCAAGGAACGCATCAAGGAGAA 76485 ||| |||| || | ||| | ||||||| | || |||||| || || | Sbjct 11991 GAATGTGACTCCCACCTCTCTTTGGGACTGGGCTTCACTAAAGGAAAAGATAGCCAAGCA 11932 Query 76486 GGGTCTTCGTAA--CAGTCTTTTGATGGCACCAATGCCAACAGCCTCCACCGCACAAATC 76543 || | || || || |||| | | || || ||||| || || |||||| | ||||| Sbjct 11931 TGGCGTCCGCAATTCACTCTTAT--TAGCCCCTATGCCTACCGCTTCCACCTCTCAAATG 11874 Query 76544 TTGGGTAATAATGAATGCTTTGAACCATACAC 76575 |||||| ||||| |||||||| || ||||| Sbjct 11873 TTGGGTTTCAATGAGTGCTTTGAGCCTTACAC 11842 >seq4556 Length=51470 Score = 116 bits (128), Expect = 4e-21 Identities = 281/424 (66%), Gaps = 6/424 (1%) Strand=Plus/Minus Query 177545 CTTTGAAGCACATTTCAACAAACTGCCTCACAGAGTGTGTCTCCCCCGTCGCGACAACAT 177604 ||||||| | |||| ||||| || || | |||||||| || || || | ||| Sbjct 6084 CTTTGAATGCCTTTTCGACAAAACTTCTTACGGTATGTGTCTCTCCGGTAGCCAAGACAA 6025 Query 177605 ATTCATCAGCCTCTTCTTGTTGAAGCATGAGCCACATGGCTTCAACATAGTCCTTGGCAT 177664 | || | || || ||||| ||||||||||||||||| | || |||||||| |||| Sbjct 6024 AATCTTGAGGCTTATCTTGCTGAAGCATGAGCCACATACCCTCCACATAGTCACGAGCAT 5965 Query 177665 GACCCCAGTCTCTGGCAGCGTTGAGGTTACCGAGTTCAAGGAACTCTCTCTCACCTTTCA 177724 | ||||| || | |||| | |||||| || | ||| | ||| ||| Sbjct 5964 GTCCCCAATCACGTTTGGCGTCAATGTTACCCAGATAAAGACATTCTTGACGACCCAAGT 5905 Query 177725 CAATTTGTTTGACGCCATCAGTAATCTTCTTTGTGACAAAGTCGGCACCTCGTCTCGGTG 177784 ||| | || || ||| ||||| ||||||||| ||| || | |||| Sbjct 5904 GAATATCAGCTACAGCACGAGTGATCTTTCGAGTGACAAAGGTACGACCACGACGGGGTG 5845 Query 177785 ATTCGTGGTTGAAGAGGATTCCGGAGCAGGCATACATACCATAGGATTCTCGGTAATTTT 177844 |||| ||||| || || || ||| ||||||||||| | || ||||||||||| | Sbjct 5844 ATTCATGGTTAAACAGAATACCGTTACAGGCATACATGTCGTAAGATTCTCGGTA---GT 5788 Query 177845 TGAC---GAGCCAGTGAGCGGCCAATTTGGAGACGCCATAGACGGATCGTGGGTAGAAGG 177901 |||| | ||||| | | | ||||| || ||||| || || |||||||||| Sbjct 5787 TGACCGTAATCCAGTAACCATAGAGTTTGGCCACACCATAAGGAGAACGAGGGTAGAAGG 5728 Query 177902 GTGTCTCCTCAGTTTGTGGAGTTTCTCGGACTTTACCAAACATCTCCGAAGTTGAGGCTT 177961 |||| ||| |||| || || || ||| ||||| | | ||| || || ||||||| Sbjct 5727 GTGTAGTCTCCTTTTGAGGCGTCTCGACGACCTTACCGTAAAGCTCAGAGGTCGAGGCTT 5668 Query 177962 GGTA 177965 |||| Sbjct 5667 GGTA 5664 >seq3345 Length=10527 Score = 109 bits (120), Expect = 7e-19 Identities = 283/426 (66%), Gaps = 14/426 (3%) Strand=Plus/Plus Query 177547 TTGAAGCACATTTCAACAAACTGCCTCACAGAGTGTGTCTCCCCCGTCGCGACAACATAT 177606 |||||| | |||||||||| || |||| |||||| || || || || | ||| | Sbjct 3580 TTGAAGGCCTTTTCAACAAAACTTCTTACAGTGTGTGTTTCACCTGTAGCCAAGACAAAG 3639 Query 177607 TCATCAGCCTCTTCTTGTTGAAGCATGAGCCACATGGCTTCAACATAGTCCTTGGCATGA 177666 || | || || |||||| || ||||||||||||||| |||||||||| || ||||| Sbjct 3640 TCTTGAGGCTTTTCTTGCTGGAGCATGAGCCACATGCCTTCAACATAATCACGAGCATGT 3699 Query 177667 CCCCAGTCTC---TGGCAGCGTTGAGGTTACCGAGTTCAAGGAACTCTCTCTCACCTTTC 177723 ||||| || | ||||| | | ||||| | | ||| | ||| | | | | | Sbjct 3700 CCCCAATCACGCTTGGCA---TCAATATTACCCAAGTAAAGACAGTCT---TGA-CGTCC 3752 Query 177724 ACAATTTGTTTGA-CGCCATCA---GTAATCTTCTTTGTGACAAAGTCGGCACCTCGTCT 177779 ||| | | | | || || || ||||| || |||||| ||| || | Sbjct 3753 TAAATGGATATCAGCTACAGCACGTGTGATCTTGCGAGTAACAAAGGTACGACCACGACG 3812 Query 177780 CGGTGATTCGTGGTTGAAGAGGATTCCGGAGCAGGCATACATACCATAGGATTCTCGGTA 177839 |||||||| |||||||||||||| ||| |||| |||||| | || ||||| || || Sbjct 3813 AGGTGATTCATGGTTGAAGAGGATACCGTTACAGGTATACATCTCGTACGATTCACGATA 3872 Query 177840 ATTTTTGACGAGCCAGTGAGCGGCCAATTTGGAGACGCCATAGACGGATCGTGGGTAGAA 177899 || || | ||||| | | | |||| ||| || || || || || ||||| Sbjct 3873 GTTGACAACAATCCAGTAACCATAGAGCTTGGCGACACCGTAAGGAGAACGAGGATAGAA 3932 Query 177900 GGGTGTCTCCTCAGTTTGTGGAGTTTCTCGGACTTTACCAAACATCTCCGAAGTTGAGGC 177959 ||||| || |||| || ||||| |||||||| | | || ||||| ||||| Sbjct 3933 AGGTGTGGTTTCCTTTTGAGGTGTTTCGACAACTTTACCGTAAAGTTCAGAAGTGGAGGC 3992 Query 177960 TTGGTA 177965 |||||| Sbjct 3993 TTGGTA 3998 >seq3946 Length=52427 Score = 104 bits (114), Expect = 3e-17 Identities = 277/421 (66%), Gaps = 12/421 (3%) Strand=Plus/Plus Query 177557 TTTCAACAAACTGCCTCACAGAGTGTGTCTCCCCCGTCGCGACAACATATTCATCAGCCT 177616 |||||||||| || |||| ||||| || || || || | || | || | || || Sbjct 15181 TTTCAACAAAACTTCTTACAGTATGTGTTTCACCTGTGGCTAGGACGAAATCTTGAGGCT 15240 Query 177617 CTTCTTGTTGAAGCATGAGCCACATGGCTTCAACATAGTCCTTGGCATGACCCCAGTCTC 177676 |||||| ||||||||||||||||| | || |||||||| ||||| ||||| || | Sbjct 15241 TTTCTTGCTGAAGCATGAGCCACATACCCTCTACATAGTCACGAGCATGTCCCCAATCAC 15300 Query 177677 ---TGGCAGCGTTGAGGTTACCGAGTTCAAGGAACTCTCTCTCACCTTTCAC---AATTT 177730 ||||| | || ||||| || | ||| | ||| | || || ||| | Sbjct 15301 GTTTGGCATCAATG---TTACCCAGATAAAGACAATCT---TGACGGCCCAAGTGAATAT 15354 Query 177731 GTTTGACGCCATCAGTAATCTTCTTTGTGACAAAGTCGGCACCTCGTCTCGGTGATTCGT 177790 || || ||||| || || |||||| ||| || | |||||||||| Sbjct 15355 CGGCCACAGCACGGGTAATTTTACGGGTTACAAAGGTACGACCACGACGAGGTGATTCGT 15414 Query 177791 GGTTGAAGAGGATTCCGGAGCAGGCATACATACCATAGGATTCTCGGTAATTTTTGACGA 177850 ||||||| ||||| || ||| ||||||||| | ||||| || ||||| ||| || Sbjct 15415 GGTTGAAAAGGATACCATTGCAAGCATACATATCGTAGGACTCACGGTAGTTTACAGTGA 15474 Query 177851 GCCAGTGAGCGGCCAATTTGGAGACGCCATAGACGGATCGTGGGTAGAAGGGTGTCTCCT 177910 ||||| | | ||||| || ||||| ||||| || |||||||| || | Sbjct 15475 TCCAGTAGCCATAGAGTTTGGCAACACCATAAGGAGATCGAGGATAGAAGGGCGTGGTTT 15534 Query 177911 CAGTTTGTGGAGTTTCTCGGACTTTACCAAACATCTCCGAAGTTGAGGCTTGGTATACAC 177970 | |||| ||||| || ||| ||||| | | || || || || |||||||| | || Sbjct 15535 CCTTTTGAGGAGTCTCCACGACCTTACCGTAAAGTTCAGAGGTAGAAGCTTGGTAGAAAC 15594 Query 177971 G 177971 | Sbjct 15595 G 15595 >seq2614 Length=127402 Score = 91.5 bits (100), Expect = 2e-13 Identities = 93/119 (78%), Gaps = 2/119 (2%) Strand=Plus/Minus Query 13773 TCAAGAAGATCCTTGGTCTTCAACAAGGAAAAGACTAC-CAAGATGTTTCTGAACTTCGC 13831 ||||| ||||||||||| ||||| || ||| | || |||| |||| || ||| | Sbjct 43860 TCAAGGCCATCCTTGGTCTCCAACATGGTAAAAAATATACAAG-TGTTGACGAGCTTAGA 43802 Query 13832 TATGGTCGTCTTATGATTATGACAGATGCCGATAATGATGGTTCTCACATCAAGGGTCT 13890 |||||||| | ||||| ||||| ||| ||| ||||||||||||||||||||||||| Sbjct 43801 TATGGTCGCTTGATGATCATGACTGATCAGGATCATGATGGTTCTCACATCAAGGGTCT 43743 >seq2429 Length=29321 Score = 87.8 bits (96), Expect = 2e-12 Identities = 118/161 (73%), Gaps = 4/161 (2%) Strand=Plus/Plus Query 75212 CCACAGTACATGTTCATGCGGGTCGCAATCGGCATCCACGGGGAAGACATTGATTCTGTC 75271 || ||||| ||| ||||||| || || |||||||| ||||| | ||| | || || | Sbjct 15034 CCTCAGTATATGATCATGCGCGTTGCTATCGGCATTCACGGTGGTGACTTGGAAGGTGCC 15093 Query 75272 TTGGAGACATACGACAAGATGTC--CCAAGGTATGTTCATTCACGCAACACCAACCCTCT 75329 || |||| || || |||||| |||| || || | ||| || ||||| ||| | | Sbjct 15094 TTCAAGACCTATGATTTGATGTCTTCCAAA-TACTTT-ACTCATGCTACACCTACCTTGT 15151 Query 75330 TCAATGCTGGTACACCAAGACCGCAGATGTCCAGTTGCTTC 75370 | |||||||||||||| ||||| ||| | || ||||| ||| Sbjct 15152 TTAATGCTGGTACACCCAGACCTCAGCTCTCTAGTTGTTTC 15192 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596535550790080