Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopus_20oryzae_20[genbank_20GCA_5F000697195.1_202014-06-02] 4,566 sequences; 42,900,422 total letters Query= NC_021246.1 Length=281182 Score E Sequences producing significant alignments: (Bits) Value seq2600 161 2e-34 seq2841 143 5e-29 seq2614 134 2e-26 seq1352 113 8e-20 >seq2600 Length=207564 Score = 161 bits (178), Expect = 2e-34 Identities = 172/227 (76%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 193134 CCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCGGAT 193193 |||||||| || || | ||||| ||| | ||| | || || |||||||| ||| | Sbjct 124522 CCACCTCTTAAACGTAATACCAAATGGAGTGTTGATTCCTTTTGTATATTATAATCGCTT 124463 Query 193194 AACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGT 193253 || || | | ||| |||| |||||| || ||||| || | ||| |||||||| || || Sbjct 124462 AATGTACGACCATCTTCTAGTTGTTTGCCAGCAAAGATAAGTCTTTGTTGATCTGGTGGA 124403 Query 193254 ATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACT 193313 || |||||||| ||||| ||||| |||| | ||| ||| ||||||||||| |||||| Sbjct 124402 ATACCTTCTTTGTCTTGAATTTTACTTTTCACATTATCAATGGTATCGGAAGATTCAACT 124343 Query 193314 TCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 |||| || || ||||| ||||| || || || |||||||||||||| Sbjct 124342 TCTAATGTGATTGTTTTGCCTGTAAGAGTCTTGACAAATATTTGCAT 124296 Score = 138 bits (152), Expect = 2e-27 Identities = 172/236 (73%), Gaps = 0/236 (0%) Strand=Plus/Minus Query 193125 ATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTA 193184 |||| |||||||||| |||| || || | ||| | || | || || ||||||| Sbjct 124303 ATTTGCATACCACCTCGTAATCTTAGCACTAAATGAAGAGTTGATTCCTTTTGAATATTA 124244 Query 193185 TAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGA 193244 ||||| | || | | ||| ||||||||||| || ||||| || | | |||||| Sbjct 124243 TAGTCACTGAGAGTACGACCATCTTCTAATTGTTTGCCAGCAAAGATGAGACGTTGTTGA 124184 Query 193245 TCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAA 193304 |||||||| || ||||| |||||||| || || |||| || ||| |||| ||| Sbjct 124183 TCAGGAGGAATACCTTCCTTATCTTGAATCTTTTGCTTTACGTTATCGATACTATCAGAA 124124 Query 193305 GACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 || |||||||||| ||| ||||||||||| || || || || ||||| |||||||| Sbjct 124123 GATTCAACTTCTAAAGTGATAGTTTTACCAGTAAGGGTCTTGACAAAAATTTGCAT 124068 >seq2841 Length=27215 Score = 143 bits (158), Expect = 5e-29 Identities = 168/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 193134 CCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCGGAT 193193 |||||||| || || | ||||| ||| | || | ||||| ||||| || || | Sbjct 25432 CCACCTCTTAAACGTAATACCAAATGAAGCGTTGATTCTTTTTGTATATTGTAATCACTT 25491 Query 193194 AACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGT 193253 || || | | || || | |||||| || |||||||||| ||| |||||||| || || Sbjct 25492 AATGTACGACCCTCTTCAAGTTGTTTACCAGCAAAAATTAGTCTTTGTTGATCGGGTGGG 25551 Query 193254 ATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACT 193313 || |||||||||||||| |||||| |||| | || ||| |||||||| || |||||| Sbjct 25552 ATACCTTCTTTATCTTGAATTTTGCTTTTCACGTTATCAATGGTATCGGAGGATTCAACT 25611 Query 193314 TCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 |||| || || || || ||||| || || || ||||| |||||||| Sbjct 25612 TCTAATGTGATTGTCTTGCCTGTAAGAGTCTTGACAAAGATTTGCAT 25658 Score = 131 bits (144), Expect = 3e-25 Identities = 122/155 (79%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 193206 TCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTTA 193265 || || | |||||| || |||||||||| ||| |||||||| || || || ||||||||| Sbjct 25738 TCTTCAAGTTGTTTACCAGCAAAAATTAGTCTTTGTTGATCGGGTGGGATACCTTCTTTA 25797 Query 193266 TCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTATA 193325 ||||| |||||| |||| | || ||| |||||||| || |||||||||| || || Sbjct 25798 TCTTGAATTTTGCTTTTCACGTTATCAATGGTATCGGAGGATTCAACTTCTAATGTGATT 25857 Query 193326 GTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 || || ||||| || || || ||||| |||||||| Sbjct 25858 GTCTTGCCTGTAAGAGTCTTGACAAAGATTTGCAT 25892 Score = 131 bits (144), Expect = 3e-25 Identities = 122/155 (79%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 193206 TCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTTA 193265 || || | |||||| || |||||||||| ||| |||||||| || || || ||||||||| Sbjct 25972 TCTTCAAGTTGTTTACCAGCAAAAATTAGTCTTTGTTGATCGGGTGGGATACCTTCTTTA 26031 Query 193266 TCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTATA 193325 ||||| |||||| |||| | || ||| |||||||| || |||||||||| || || Sbjct 26032 TCTTGAATTTTGCTTTTCACGTTATCAATGGTATCGGAGGATTCAACTTCTAATGTGATT 26091 Query 193326 GTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 || || ||||| || || || ||||| |||||||| Sbjct 26092 GTCTTGCCTGTAAGAGTCTTGACAAAGATTTGCAT 26126 >seq2614 Length=127402 Score = 134 bits (148), Expect = 2e-26 Identities = 173/239 (72%), Gaps = 0/239 (0%) Strand=Plus/Minus Query 193122 GTAATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATA 193181 || ||||| | ||| || | | ||||| |||| || | || | ||||| ||| Sbjct 59423 GTTATTTAAAAACCGCCACGAAGACGAAGGACCAAGTGAAGAGTGGATTCTTTTTGAATG 59364 Query 193182 TTATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGT 193241 || ||||| || | || | ||| ||||||||||| || ||||| || || | ||| Sbjct 59363 TTGTAGTCTGAAAGGGTACGGCCATCTTCTAATTGTTTACCAGCAAAGATCAAACGTTGT 59304 Query 193242 TGATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCG 193301 || |||||||| || ||||| || ||||| || || |||| |||| |||| |||| Sbjct 59303 TGGTCAGGAGGAATCCCTTCCTTGTCTTGAATCTTTTGCTTTACATTTTCAATACTATCA 59244 Query 193302 GAAGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 |||||||||||||||| ||| || |||||||| || || ||||| || || || ||||| Sbjct 59243 GAAGACTCAACTTCTAAAGTGATGGTTTTACCAGTAAGGGTTTTGACGAAAATCTGCAT 59185 >seq1352 Length=65141 Score = 113 bits (124), Expect = 8e-20 Identities = 167/237 (70%), Gaps = 0/237 (0%) Strand=Plus/Plus Query 193124 AATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATT 193183 ||||| |||||||| | | || || |||| || | |||| || || ||| || Sbjct 15286 AATTTGCATACCACCACGAAGACGGAGAACCAAGTGGAGAGTAGATTCCTTTTGAATGTT 15345 Query 193184 ATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTG 193243 |||||| || | || | ||| || | || || || ||||| || || | |||||| Sbjct 15346 ATAGTCTGAAAGGGTGCGGCCATCTTCAAGCTGCTTACCAGCAAAGATCAAACGCTGTTG 15405 Query 193244 ATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGA 193303 ||||||||| || || || || ||||| || || || | ||| |||| |||| || Sbjct 15406 ATCAGGAGGAATGCCCTCCTTGTCTTGAATCTTTTGCTTGACATTCTCAATACTATCAGA 15465 Query 193304 AGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 |||||||||||| | ||| || |||||||| || | || || ||||| |||||||| Sbjct 15466 AGACTCAACTTCCAAAGTGATGGTTTTACCAGTCAAAGTCTTGACAAAAATTTGCAT 15522 Score = 113 bits (124), Expect = 8e-20 Identities = 167/237 (70%), Gaps = 0/237 (0%) Strand=Plus/Plus Query 193124 AATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATT 193183 ||||| |||||||| | | || || |||| || | |||| || || ||| || Sbjct 15742 AATTTGCATACCACCACGAAGACGGAGAACCAAGTGGAGAGTAGATTCCTTTTGAATGTT 15801 Query 193184 ATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTG 193243 |||||| || | || | ||| || | || || || ||||| || || | |||||| Sbjct 15802 ATAGTCTGAAAGGGTGCGGCCATCTTCAAGCTGCTTACCAGCAAAGATCAAACGCTGTTG 15861 Query 193244 ATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGA 193303 ||||||||| || || || || ||||| || || || | ||| |||| |||| || Sbjct 15862 ATCAGGAGGAATGCCCTCCTTGTCTTGAATCTTTTGCTTGACATTCTCAATACTATCAGA 15921 Query 193304 AGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 |||||||||||| | ||| || |||||||| || | || || ||||| |||||||| Sbjct 15922 AGACTCAACTTCCAAAGTGATGGTTTTACCAGTCAAAGTCTTGACAAAAATTTGCAT 15978 Score = 109 bits (120), Expect = 1e-18 Identities = 134/183 (73%), Gaps = 0/183 (0%) Strand=Plus/Plus Query 193178 AATATTATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCT 193237 |||||| ||||| || || | | || || |||||||| || ||||| || || | Sbjct 15112 AATATTGTAGTCACTCAAAGTACGACCGTCTTCCAATTGTTTACCAGCAAAGATCAAACG 15171 Query 193238 CTGTTGATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGT 193297 ||||||||||||||| ||||| || |||||||| || || || | ||| ||| | Sbjct 15172 CTGTTGATCAGGAGGAATTCCCTCCTTATCTTGAATCTTTTGCTTGACATTCTCAATGCT 15231 Query 193298 ATCGGAAGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTG 193357 ||| |||||||| ||||| | ||| || || ||||| || || || || || || ||||| Sbjct 15232 ATCAGAAGACTCGACTTCCAAAGTAATGGTCTTACCAGTGAGAGTCTTGACGAAAATTTG 15291 Query 193358 CAT 193360 ||| Sbjct 15292 CAT 15294 Score = 93.3 bits (102), Expect = 8e-14 Identities = 165/241 (68%), Gaps = 0/241 (0%) Strand=Plus/Plus Query 193124 AATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATT 193183 ||||| |||||||| | | || || |||| || | |||| || || ||| || Sbjct 16198 AATTTGCATACCACCACGAAGACGGAGAACCAAGTGGAGAGTAGATTCCTTTTGAATGTT 16257 Query 193184 ATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTG 193243 ||||| || | || | ||| || | || || || ||||| || || | ||||| Sbjct 16258 GTAGTCTGAAAGGGTGCGGCCATCTTCAAGCTGCTTACCAGCAAAGATCAAACGTTGTTG 16317 Query 193244 ATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGA 193303 ||||||||| || ||||| || ||||| ||||| || | ||| || |||| || Sbjct 16318 ATCAGGAGGGATACCTTCCTTGTCTTGGATTTTTTGCTTGACGTTTTCGATGCTATCAGA 16377 Query 193304 AGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCATTTT 193363 || || || || | ||| || || || || || || ||||| ||||| ||||||||||| Sbjct 16378 GGATTCGACCTCCAAAGTGATGGTCTTGCCAGTAAGTGTTTTAACAAAGATTTGCATTTT 16437 Query 193364 A 193364 | Sbjct 16438 A 16438 Score = 86.0 bits (94), Expect = 1e-11 Identities = 112/155 (72%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 193206 TCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTTA 193265 || || |||||||| || || ||||| | | || ||||||||||| || || || ||| Sbjct 15596 TCTTCCAATTGTTTACCAGCGAAAATGAGACGTTGCTGATCAGGAGGAATGCCCTCCTTA 15655 Query 193266 TCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTATA 193325 ||||| || || || | ||| ||| |||| |||||||| ||||| | ||| || Sbjct 15656 TCTTGAATCTTTTGCTTGACATTCTCAATGCTATCAGAAGACTCGACTTCCAAAGTGATG 15715 Query 193326 GTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 || ||||| || | || || || || |||||||| Sbjct 15716 GTCTTACCAGTCAAAGTCTTGACGAAAATTTGCAT 15750 Score = 86.0 bits (94), Expect = 1e-11 Identities = 112/155 (72%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 193206 TCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTTA 193265 || || |||||||| || || ||||| | | || ||||||||||| || || || ||| Sbjct 16052 TCTTCCAATTGTTTACCAGCGAAAATGAGACGTTGCTGATCAGGAGGAATGCCCTCCTTA 16111 Query 193266 TCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTATA 193325 ||||| || || || | ||| ||| |||| |||||||| ||||| | ||| || Sbjct 16112 TCTTGAATCTTTTGCTTGACATTCTCAATGCTATCAGAAGACTCGACTTCCAAAGTGATG 16171 Query 193326 GTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 || ||||| || | || || || || |||||||| Sbjct 16172 GTCTTACCAGTCAAAGTCTTGACGAAAATTTGCAT 16206 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 899603052225120