Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopus_20oryzae_20[genbank_20GCA_5F000697195.1_202014-06-02] 4,566 sequences; 42,900,422 total letters Query= NC_021924.1 Length=129052 Score E Sequences producing significant alignments: (Bits) Value seq2600 95.1 1e-14 seq1352 93.3 3e-14 seq2841 91.5 1e-13 seq2614 84.2 2e-11 >seq2600 Length=207564 Score = 95.1 bits (104), Expect = 1e-14 Identities = 159/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGAC 110332 ||||||||||||||||| ||| | || |||||||| || || | ||| || || | Sbjct 124296 ATGCAAATATTTGTCAAGACTCTTACAGGCAAAACAATCACATTAGAAGTTGAATCTTCC 124355 Query 110333 GATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCAA 110392 ||||| | | | || ||| || ||| ||||||||||| | || |||||| Sbjct 124356 GATACCATTGATAATGTGAAAAGTAAAATTCAAGACAAAGAAGGTATTCCACCAGATCAA 124415 Query 110393 CAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAAC 110452 ||||||||||| | ||| || ||||| || || |||| | ||| | ||||| || Sbjct 124416 CAAAGACTTATCTTTGCTGGCAAACAACTAGAAGATGGTCGTACATTAAGCGATTATAAT 124475 Query 110453 ATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGGAAA 110502 || ||||| ||||| || | || |||| ||| | | |||| ||||| Sbjct 124476 ATACAAAAGGAATCAACACTCCATTTGGTATTACGTTTAAGAGGTGGAAA 124525 >seq1352 Length=65141 Score = 93.3 bits (102), Expect = 3e-14 Identities = 146/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGAC 110332 |||||||| |||||||| ||||| || || |||||||| || | ||| ||| || Sbjct 15522 ATGCAAATTTTTGTCAAGACTTTGACTGGTAAAACCATCACTTTGGAAGTTGAGTCTTCT 15463 Query 110333 GATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCAA 110392 |||| | | | | || || || |||||| ||||| || ||| | || |||||| Sbjct 15462 GATAGTATTGAGAATGTCAAGCAAAAGATTCAAGACAAGGAGGGCATTCCTCCTGATCAA 15403 Query 110393 CAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAAC 110452 || | | || | ||| ||||| ||||| || |||| | | || | | || || ||| Sbjct 15402 CAGCGTTTGATCTTTGCTGGTAAGCAGCTTGAAGATGGCCGCACCCTTTCAGACTATAAC 15343 Query 110453 ATTCAAAAAGAATCTACGTTGCACATGGT 110481 |||||||| |||||||| | ||| |||| Sbjct 15342 ATTCAAAAGGAATCTACTCTCCACTTGGT 15314 Score = 93.3 bits (102), Expect = 3e-14 Identities = 146/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGAC 110332 |||||||| |||||||| ||||| || || |||||||| || | ||| ||| || Sbjct 15978 ATGCAAATTTTTGTCAAGACTTTGACTGGTAAAACCATCACTTTGGAAGTTGAGTCTTCT 15919 Query 110333 GATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCAA 110392 |||| | | | | || || || |||||| ||||| || ||| | || |||||| Sbjct 15918 GATAGTATTGAGAATGTCAAGCAAAAGATTCAAGACAAGGAGGGCATTCCTCCTGATCAA 15859 Query 110393 CAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAAC 110452 || | | || | ||| ||||| ||||| || |||| | | || | | || || ||| Sbjct 15858 CAGCGTTTGATCTTTGCTGGTAAGCAGCTTGAAGATGGCCGCACCCTTTCAGACTATAAC 15799 Query 110453 ATTCAAAAAGAATCTACGTTGCACATGGT 110481 |||||||| |||||||| | ||| |||| Sbjct 15798 ATTCAAAAGGAATCTACTCTCCACTTGGT 15770 Score = 87.8 bits (96), Expect = 1e-12 Identities = 151/217 (70%), Gaps = 2/217 (1%) Strand=Plus/Minus Query 110266 ATTTAAAATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAA-CGG 110324 ||||||||||||||| ||||| ||||| | || ||||| ||||| || | || || Sbjct 16441 ATTTAAAATGCAAATCTTTGTTAAAACACTTACTGGCAAGACCATCACTTTGGAGGTCGA 16382 Query 110325 AGCCTGACGATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCG 110384 | ||| |||| ||| | || || || || || ||||| ||||| | || Sbjct 16381 ATCCTCT-GATAGCATCGAAAACGTCAAGCAAAAAATCCAAGACAAGGAAGGTATCCCTC 16323 Query 110385 TGGATCAACAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGG 110444 ||||||||| | | || | ||| ||||| ||||| || |||| | | || | | | Sbjct 16322 CTGATCAACAACGTTTGATCTTTGCTGGTAAGCAGCTTGAAGATGGCCGCACCCTTTCAG 16263 Query 110445 ATTACAACATTCAAAAAGAATCTACGTTGCACATGGT 110481 | |||||||||||||| |||||||| | ||| |||| Sbjct 16262 ACTACAACATTCAAAAGGAATCTACTCTCCACTTGGT 16226 >seq2841 Length=27215 Score = 91.5 bits (100), Expect = 1e-13 Identities = 158/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGAC 110332 |||||||| |||||||| ||| | || ||||| || || || | ||| || | | Sbjct 25658 ATGCAAATCTTTGTCAAGACTCTTACAGGCAAGACAATCACATTAGAAGTTGAATCCTCC 25599 Query 110333 GATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCAA 110392 ||||| | | | || ||| || ||| || |||||||| | || |||||| Sbjct 25598 GATACCATTGATAACGTGAAAAGCAAAATTCAAGATAAAGAAGGTATCCCACCCGATCAA 25539 Query 110393 CAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAAC 110452 |||||||| |||| ||| |||||||| || || || | | ||| | |||||||| Sbjct 25538 CAAAGACTAATTTTTGCTGGTAAACAACTTGAAGAGGGTCGTACATTAAGTGATTACAAT 25479 Query 110453 ATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGGAAA 110502 || ||||||||||| ||| | || |||| ||| | | |||| ||||| Sbjct 25478 ATACAAAAAGAATCAACGCTTCATTTGGTATTACGTTTAAGAGGTGGAAA 25429 Score = 87.8 bits (96), Expect = 1e-12 Identities = 147/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGAC 110332 |||||||| |||||||| ||| | || ||||| || || || | ||| || | | Sbjct 25892 ATGCAAATCTTTGTCAAGACTCTTACAGGCAAGACAATCACATTAGAAGTTGAATCCTCC 25833 Query 110333 GATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCAA 110392 ||||| | | | || ||| || ||| || |||||||| | || |||||| Sbjct 25832 GATACCATTGATAACGTGAAAAGCAAAATTCAAGATAAAGAAGGTATCCCACCCGATCAA 25773 Query 110393 CAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAAC 110452 |||||||| |||| ||| |||||||| || || || | | ||| | |||||||| Sbjct 25772 CAAAGACTAATTTTTGCTGGTAAACAACTTGAAGAGGGTCGTACATTAAGTGATTACAAT 25713 Query 110453 ATTCAAAAAGAATCTACGTTGCACATGGTGTTA 110485 || ||||||||||| ||| | || |||| ||| Sbjct 25712 ATACAAAAAGAATCAACGCTTCAATTGGTATTA 25680 Score = 87.8 bits (96), Expect = 1e-12 Identities = 147/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGAC 110332 |||||||| |||||||| ||| | || ||||| || || || | ||| || | | Sbjct 26126 ATGCAAATCTTTGTCAAGACTCTTACAGGCAAGACAATCACATTAGAAGTTGAATCCTCC 26067 Query 110333 GATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCAA 110392 ||||| | | | || ||| || ||| || |||||||| | || |||||| Sbjct 26066 GATACCATTGATAACGTGAAAAGCAAAATTCAAGATAAAGAAGGTATCCCACCCGATCAA 26007 Query 110393 CAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAAC 110452 |||||||| |||| ||| |||||||| || || || | | ||| | |||||||| Sbjct 26006 CAAAGACTAATTTTTGCTGGTAAACAACTTGAAGAGGGTCGTACATTAAGTGATTACAAT 25947 Query 110453 ATTCAAAAAGAATCTACGTTGCACATGGTGTTA 110485 || ||||||||||| ||| | || |||| ||| Sbjct 25946 ATACAAAAAGAATCAACGCTTCAATTGGTATTA 25914 >seq2614 Length=127402 Score = 84.2 bits (92), Expect = 2e-11 Identities = 144/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGAC 110332 ||||| || || |||||||| | || || |||||||||||| | ||| || || Sbjct 58957 ATGCAGATTTTCGTCAAAACCCTTACTGGTAAAACCATTACCTTGGAAGTCGAATCTTCT 59016 Query 110333 GATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCAA 110392 |||| | | | | || || || |||||| ||||| ||||| | || ||||| Sbjct 59017 GATAGTATTGAGAACGTCAAGCAAAAGATTCAAGACAAGGAAGGTATTCCTCCTGATCAG 59076 Query 110393 CAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAAC 110452 ||| | | || | ||| ||||| ||||| || |||| | || || ||||||||| Sbjct 59077 CAACGTTTGATCTTTGCTGGTAAGCAGCTCGAAGATGGTCGTACTTTGAGTGATTACAAC 59136 Query 110453 ATTCAAAAAGAATCTACGTTGCACATGGT 110481 |||||||| ||||| || | ||| |||| Sbjct 59137 ATTCAAAAGGAATCCACTCTCCACTTGGT 59165 Score = 84.2 bits (92), Expect = 2e-11 Identities = 144/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGAC 110332 ||||| || || |||||||| | || || |||||||| || | ||| ||| || Sbjct 59185 ATGCAGATTTTCGTCAAAACCCTTACTGGTAAAACCATCACTTTAGAAGTTGAGTCTTCT 59244 Query 110333 GATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCAA 110392 |||| | | | | ||||| || |||||| ||||| ||||| | || || ||| Sbjct 59245 GATAGTATTGAAAATGTAAAGCAAAAGATTCAAGACAAGGAAGGGATTCCTCCTGACCAA 59304 Query 110393 CAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAAC 110452 ||| | | || | ||| |||||||| | || |||| | | || | | || |||||| Sbjct 59305 CAACGTTTGATCTTTGCTGGTAAACAATTAGAAGATGGCCGTACCCTTTCAGACTACAAC 59364 Query 110453 ATTCAAAAAGAATCTACGTTGCACATGGT 110481 |||||||||||||| || | ||| |||| Sbjct 59365 ATTCAAAAAGAATCCACTCTTCACTTGGT 59393 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 412818626139038