Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopus_20oryzae_20[genbank_20GCA_5F000697195.1_202014-06-02] 4,566 sequences; 42,900,422 total letters Query= NC_025412.1 Length=369360 Score E Sequences producing significant alignments: (Bits) Value seq2614 111 4e-19 seq2600 96.9 8e-15 seq1352 96.9 8e-15 seq3863 95.1 3e-14 seq2553 89.7 1e-12 seq3464 84.2 5e-11 >seq2614 Length=127402 Score = 111 bits (122), Expect = 4e-19 Identities = 145/201 (72%), Gaps = 0/201 (0%) Strand=Plus/Plus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| || |||||| || || || ||||| |||||||| ||||| || |||||| Sbjct 59188 CAGATTTTCGTCAAAACCCTTACTGGTAAAACCATCACTTTAGAAGTTGAGTCTTCTGAT 59247 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 | | ||| |||||||||||||||||||| || ||||| ||| || ||| ||| Sbjct 59248 AGTATTGAAAATGTAAAGCAAAAGATTCAAGACAAGGAAGGGATTCCTCCTGACCAACAA 59307 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 | | ||||| || || || || || |||||||| | || | | || |||||| | Sbjct 59308 CGTTTGATCTTTGCTGGTAAACAATTAGAAGATGGCCGTACCCTTTCAGACTACAACATT 59367 Query 206353 CAGAAAGAGTCTACTCTTCAC 206373 || ||||| || ||||||||| Sbjct 59368 CAAAAAGAATCCACTCTTCAC 59388 Score = 109 bits (120), Expect = 1e-18 Identities = 155/218 (71%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| || |||||| || || || ||||| || || |||||||| ||| |||||| Sbjct 58960 CAGATTTTCGTCAAAACCCTTACTGGTAAAACCATTACCTTGGAAGTCGAATCTTCTGAT 59019 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 | | || || ||||||||||||||||| || ||||| ||| || || ||| Sbjct 59020 AGTATTGAGAACGTCAAGCAAAAGATTCAAGACAAGGAAGGTATTCCTCCTGATCAGCAA 59079 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 | | ||||| || || |||||| | |||||||| | |||||| ||||||||| | Sbjct 59080 CGTTTGATCTTTGCTGGTAAGCAGCTCGAAGATGGTCGTACTTTGAGTGATTACAACATT 59139 Query 206353 CAGAAAGAGTCTACTCTTCACCTTGTTTTGAGACTTCG 206390 || || || || ||||| ||| | ||| | | ||||| Sbjct 59140 CAAAAGGAATCCACTCTCCACTTGGTTCTCCGTCTTCG 59177 Score = 104 bits (114), Expect = 6e-17 Identities = 151/212 (71%), Gaps = 1/212 (0%) Strand=Plus/Plus Query 206180 TTTGCAAA-ACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTC 206238 |||| ||| || || |||||||| || |||||||| ||||| ||| |||||| | || Sbjct 58738 TTTGTAAAGACCCTTACAGGAAAGACTATCACTTTAGAAGTCGAATCTTCTGATAGCATC 58797 Query 206239 GAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTT 206298 ||| |||||||||||||| ||||| || ||||| ||| || ||| ||| | || Sbjct 58798 GAAAATGTAAAGCAAAAGATCCAAGACAAGGAAGGTATTCCTCCAGACCAACAACGTCTC 58857 Query 206299 ATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAA 206358 || || || || || || | |||||||| | || | | || |||||| | || || Sbjct 58858 ATTTTTGCTGGTAAACAACTCGAAGATGGTCGTACCCTTTCAGACTACAACATTCAAAAG 58917 Query 206359 GAGTCTACTCTTCACCTTGTTTTGAGACTTCG 206390 || || ||||| ||| | ||| | | ||||| Sbjct 58918 GAATCCACTCTCCACTTGGTTCTCCGTCTTCG 58949 >seq2600 Length=207564 Score = 96.9 bits (106), Expect = 8e-15 Identities = 139/195 (71%), Gaps = 1/195 (1%) Strand=Plus/Plus Query 206179 TTTTG-CAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGT 206237 ||||| ||| || || || || ||||| |||||||| ||||| ||| |||||| | | Sbjct 124076 TTTTGTCAAGACCCTTACTGGTAAAACTATCACTTTAGAAGTTGAATCTTCTGATAGTAT 124135 Query 206238 CGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACT 206297 ||| |||||||||||||||||||| || ||||| ||| || || ||| | || Sbjct 124136 CGATAACGTAAAGCAAAAGATTCAAGATAAGGAAGGTATTCCTCCTGATCAACAACGTCT 124195 Query 206298 TATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAA 206357 ||||| || || || || || |||||||| | ||| | || || || | || || Sbjct 124196 CATCTTTGCTGGCAAACAATTAGAAGATGGTCGTACTCTCAGTGACTATAATATTCAAAA 124255 Query 206358 AGAGTCTACTCTTCA 206372 || || |||||||| Sbjct 124256 GGAATCAACTCTTCA 124270 Score = 89.7 bits (98), Expect = 1e-12 Identities = 142/202 (70%), Gaps = 4/202 (2%) Strand=Plus/Plus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 || |||||| ||| || || ||||| ||||| ||||| || ||||| ||| ||| || Sbjct 124299 CAAATATTTGTCAAGACTCTTACAGGCAAAACAATCACATTAGAAGTTGAATCTTCCGAT 124358 Query 206233 ACAGTCGA--ATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTC 206290 || | || || | |||| |||| ||||||| |||||||| ||| || || | Sbjct 124359 ACCATTGATAATGTGAAAAGTAAAA--TTCAAGACAAAGAAGGTATTCCACCAGATCAAC 124416 Query 206291 AAAGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACG 206350 ||||||||||||| || || || || | |||||||| | || || |||||| || Sbjct 124417 AAAGACTTATCTTTGCTGGCAAACAACTAGAAGATGGTCGTACATTAAGCGATTATAATA 124476 Query 206351 TCCAGAAAGAGTCTACTCTTCA 206372 | || || || || || || || Sbjct 124477 TACAAAAGGAATCAACACTCCA 124498 >seq1352 Length=65141 Score = 96.9 bits (106), Expect = 8e-15 Identities = 143/199 (72%), Gaps = 4/199 (2%) Strand=Plus/Minus Query 206194 ACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACA-CAGTC-GAATCAGTAAAGC 206251 || || || || |||||||||||||| || |||||| | || | |||| || |||| Sbjct 15726 ACTGGTAAGACCATCACTTTGGAAGTCGAGTCTTCTGATAGCATTGAGAAT--GTCAAGC 15669 Query 206252 AAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCGCCGGAA 206311 ||||||||||||| || || || ||| || || ||| | || || ||||| || | Sbjct 15668 AAAAGATTCAAGATAAGGAGGGCATTCCTCCTGATCAGCAACGTCTCATTTTCGCTGGTA 15609 Query 206312 AGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTACTCTTC 206371 | || |||||||| || | |||||| || |||||| |||| || || || ||||| | Sbjct 15608 AACAATTGGAAGACGGTCGCACTTTGAGTGACTACAACATCCAAAAGGAATCCACTCTCC 15549 Query 206372 ACCTTGTTTTGAGACTTCG 206390 || | ||| | | ||||| Sbjct 15548 ACTTGGTTCTCCGTCTTCG 15530 Score = 96.9 bits (106), Expect = 8e-15 Identities = 143/199 (72%), Gaps = 4/199 (2%) Strand=Plus/Minus Query 206194 ACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACA-CAGTC-GAATCAGTAAAGC 206251 || || || || |||||||||||||| || |||||| | || | |||| || |||| Sbjct 16182 ACTGGTAAGACCATCACTTTGGAAGTCGAGTCTTCTGATAGCATTGAGAAT--GTCAAGC 16125 Query 206252 AAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCGCCGGAA 206311 ||||||||||||| || || || ||| || || ||| | || || ||||| || | Sbjct 16124 AAAAGATTCAAGATAAGGAGGGCATTCCTCCTGATCAGCAACGTCTCATTTTCGCTGGTA 16065 Query 206312 AGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTACTCTTC 206371 | || |||||||| || | |||||| || |||||| |||| || || || ||||| | Sbjct 16064 AACAATTGGAAGACGGTCGCACTTTGAGTGACTACAACATCCAAAAGGAATCCACTCTCC 16005 Query 206372 ACCTTGTTTTGAGACTTCG 206390 || | ||| | | ||||| Sbjct 16004 ACTTGGTTCTCCGTCTTCG 15986 Score = 89.7 bits (98), Expect = 1e-12 Identities = 151/212 (71%), Gaps = 10/212 (5%) Strand=Plus/Minus Query 206184 CAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACA-CAGTC-GAA 206241 ||| || ||||| || || || || ||||||||||| || |||||| | || | ||| Sbjct 15280 CAAGACTCTCACTGGTAAGACCATTACTTTGGAAGTCGAGTCTTCTGATAGCATTGAGAA 15221 Query 206242 TCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA-AGACTT-- 206298 | || ||||||||||||||||| || || |||||| || || |||| || || Sbjct 15220 T--GTCAAGCAAAAGATTCAAGATAAGGAGGGAATTCCTCCTGA---TCAACAGCGTTTG 15166 Query 206299 ATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAA 206358 ||||| || || || || |||||||| || | |||||| || ||||| | || || Sbjct 15165 ATCTTTGCTGGTAAACAATTGGAAGACGGTCGTACTTTGAGTGACTACAATATTCAAAAG 15106 Query 206359 GAGTCTACTCTTCACCTTGTTTTGAGACTTCG 206390 || || || |||||| | ||| | | ||||| Sbjct 15105 GAATCCACCCTTCACTTGGTTCTCCGTCTTCG 15074 Score = 89.7 bits (98), Expect = 1e-12 Identities = 157/228 (69%), Gaps = 3/228 (1%) Strand=Plus/Minus Query 206163 TAAAATGTACCAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGA 206222 ||||||| || || ||| ||||| || || || || || ||||||||||| || || Sbjct 16438 TAAAATG---CAAATCTTTGTTAAAACACTTACTGGCAAGACCATCACTTTGGAGGTCGA 16382 Query 206223 AAGTTCTGACACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCC 206282 | ||||| | ||||| || |||||||| || ||||| || ||||| || || Sbjct 16381 ATCCTCTGATAGCATCGAAAACGTCAAGCAAAAAATCCAAGACAAGGAAGGTATCCCTCC 16322 Query 206283 GGACGCTCAAAGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGA 206342 || ||| | | ||||| || || |||||| | |||||||| | || | | || Sbjct 16321 TGATCAACAACGTTTGATCTTTGCTGGTAAGCAGCTTGAAGATGGCCGCACCCTTTCAGA 16262 Query 206343 TTACAACGTCCAGAAAGAGTCTACTCTTCACCTTGTTTTGAGACTTCG 206390 |||||| | || || || |||||||| ||| | ||| | | ||||| Sbjct 16261 CTACAACATTCAAAAGGAATCTACTCTCCACTTGGTTCTCCGTCTTCG 16214 Score = 86.0 bits (94), Expect = 1e-11 Identities = 151/216 (70%), Gaps = 7/216 (3%) Strand=Plus/Minus Query 206179 TTTTG-CAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGT 206237 ||||| ||| || | || || ||||| |||||||||||||| || |||||| | | Sbjct 15514 TTTTGTCAAGACTTTGACTGGTAAAACCATCACTTTGGAAGTTGAGTCTTCTGATAGTAT 15455 Query 206238 CGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA-AGAC 206296 || || ||||||||||||||||| || || || ||| || || |||| || Sbjct 15454 TGAGAATGTCAAGCAAAAGATTCAAGACAAGGAGGGCATTCCTCCTGA---TCAACAGCG 15398 Query 206297 TT--ATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCA 206354 || ||||| || || |||||| | |||||||| | || | | || || ||| | || Sbjct 15397 TTTGATCTTTGCTGGTAAGCAGCTTGAAGATGGCCGCACCCTTTCAGACTATAACATTCA 15338 Query 206355 GAAAGAGTCTACTCTTCACCTTGTTTTGAGACTTCG 206390 || || |||||||| ||| | ||| | | ||||| Sbjct 15337 AAAGGAATCTACTCTCCACTTGGTTCTCCGTCTTCG 15302 Score = 86.0 bits (94), Expect = 1e-11 Identities = 151/216 (70%), Gaps = 7/216 (3%) Strand=Plus/Minus Query 206179 TTTTG-CAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGT 206237 ||||| ||| || | || || ||||| |||||||||||||| || |||||| | | Sbjct 15970 TTTTGTCAAGACTTTGACTGGTAAAACCATCACTTTGGAAGTTGAGTCTTCTGATAGTAT 15911 Query 206238 CGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA-AGAC 206296 || || ||||||||||||||||| || || || ||| || || |||| || Sbjct 15910 TGAGAATGTCAAGCAAAAGATTCAAGACAAGGAGGGCATTCCTCCTGA---TCAACAGCG 15854 Query 206297 TT--ATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCA 206354 || ||||| || || |||||| | |||||||| | || | | || || ||| | || Sbjct 15853 TTTGATCTTTGCTGGTAAGCAGCTTGAAGATGGCCGCACCCTTTCAGACTATAACATTCA 15794 Query 206355 GAAAGAGTCTACTCTTCACCTTGTTTTGAGACTTCG 206390 || || |||||||| ||| | ||| | | ||||| Sbjct 15793 AAAGGAATCTACTCTCCACTTGGTTCTCCGTCTTCG 15758 >seq3863 Length=144211 Score = 95.1 bits (104), Expect = 3e-14 Identities = 121/167 (72%), Gaps = 0/167 (0%) Strand=Plus/Minus Query 206224 AGTTCTGACACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCG 206283 || |||||||| | || || ||||||||||||||||| || ||||| ||| || Sbjct 120122 AGCTCTGACACCATTGACAATGTCAAGCAAAAGATTCAAGACAAGGAAGGTATTCCTCCT 120063 Query 206284 GACGCTCAAAGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGAT 206343 || ||| | || || |||||||| || || ||||||||||| | || ||| || Sbjct 120062 GATCAACAACGTCTCATTTTCGCCGGTAAACAATTGGAAGATGGTCGCACCTTGAGTGAC 120003 Query 206344 TACAACGTCCAGAAAGAGTCTACTCTTCACCTTGTTTTGAGACTTCG 206390 |||||| | || || || |||||||||||| | ||| | | ||||| Sbjct 120002 TACAACATTCAAAAGGAATCTACTCTTCACTTGGTTCTCCGTCTTCG 119956 >seq2553 Length=14598 Score = 89.7 bits (98), Expect = 1e-12 Identities = 120/167 (72%), Gaps = 0/167 (0%) Strand=Plus/Plus Query 206224 AGTTCTGACACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCG 206283 || |||||||| | || || ||||||||||||||||| || ||||| ||| || Sbjct 8049 AGCTCTGACACCATTGACAATGTCAAGCAAAAGATTCAAGACAAGGAAGGTATTCCTCCT 8108 Query 206284 GACGCTCAAAGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGAT 206343 ||| ||| | || || |||||||| || || || ||||| || | |||||| ||| Sbjct 8109 GACCAACAACGTCTCATTTTCGCCGGTAAACAATTAGAAGACGGTCGTACTTTGAGCGAC 8168 Query 206344 TACAACGTCCAGAAAGAGTCTACTCTTCACCTTGTTTTGAGACTTCG 206390 |||||| | || || || || || |||||| | ||| | | ||||| Sbjct 8169 TACAACATTCAAAAGGAATCCACCCTTCACTTGGTTCTCCGTCTTCG 8215 >seq3464 Length=64949 Score = 84.2 bits (92), Expect = 5e-11 Identities = 79/101 (78%), Gaps = 0/101 (0%) Strand=Plus/Minus Query 206290 CAAAGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAAC 206349 ||| | |||||||| || || ||||| ||||||||||| | |||||| ||| |||||| Sbjct 37896 CAACGTCTTATCTTTGCTGGTAAGCAATTGGAAGATGGTCGTACTTTGAGCGACTACAAC 37837 Query 206350 GTCCAGAAAGAGTCTACTCTTCACCTTGTTTTGAGACTTCG 206390 | || || || |||||||||||||| ||| | | ||||| Sbjct 37836 ATTCAAAAGGAATCTACTCTTCACCTGGTTCTCCGTCTTCG 37796 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1181751661267286