Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopus_20oryzae_20[genbank_20GCA_5F000697195.1_202014-06-02] 4,566 sequences; 42,900,422 total letters Query= NC_026511.1 Length=140913 Score E Sequences producing significant alignments: (Bits) Value seq1352 122 8e-23 seq2614 105 6e-18 >seq1352 Length=65141 Score = 122 bits (134), Expect = 8e-23 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 |||||||| | | | ||||| || | ||| |||||||||||||| || || | Sbjct 15296 CCACCACGAAGACGGAGAACCAAGTGGAGAGTAGATTCCTTTTGAATGTTATAGTCTGAA 15355 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 | ||| || | || || ||||||||||| ||||| ||||| ||||| || || | |||| Sbjct 15356 AGGGTGCGGCCATCTTCAAGCTGCTTACCAGCAAAGATCAAACGCTGTTGATCAGGAGGA 15415 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACC 35689 | || ||||||||| ||||||||||| | | | | | | || || || || Sbjct 15416 ATGCCCTCCTTGTCTTGAATCTTTTGCTTGACATTCTCAATACTATCAGAAGACTCAACT 15475 Query 35690 TCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 |||| ||||| |||||||| |||||||| || ||||| || ||||| Sbjct 15476 TCCAAAGTGATGGTTTTACCAGTCAAAGTCTTGACAAAAATTTGCAT 15522 Score = 122 bits (134), Expect = 8e-23 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 |||||||| | | | ||||| || | ||| |||||||||||||| || || | Sbjct 15752 CCACCACGAAGACGGAGAACCAAGTGGAGAGTAGATTCCTTTTGAATGTTATAGTCTGAA 15811 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 | ||| || | || || ||||||||||| ||||| ||||| ||||| || || | |||| Sbjct 15812 AGGGTGCGGCCATCTTCAAGCTGCTTACCAGCAAAGATCAAACGCTGTTGATCAGGAGGA 15871 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACC 35689 | || ||||||||| ||||||||||| | | | | | | || || || || Sbjct 15872 ATGCCCTCCTTGTCTTGAATCTTTTGCTTGACATTCTCAATACTATCAGAAGACTCAACT 15931 Query 35690 TCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 |||| ||||| |||||||| |||||||| || ||||| || ||||| Sbjct 15932 TCCAAAGTGATGGTTTTACCAGTCAAAGTCTTGACAAAAATTTGCAT 15978 Score = 100 bits (110), Expect = 3e-16 Identities = 159/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 |||||||| | | | ||||| || | ||| ||||||||||||||||| || | Sbjct 16208 CCACCACGAAGACGGAGAACCAAGTGGAGAGTAGATTCCTTTTGAATGTTGTAGTCTGAA 16267 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 | ||| || | || || ||||||||||| ||||| ||||| || || || || | ||| Sbjct 16268 AGGGTGCGGCCATCTTCAAGCTGCTTACCAGCAAAGATCAAACGTTGTTGATCAGGAGGG 16327 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACC 35689 | | |||||||| ||| |||||||| | || | | | || ||||| ||| Sbjct 16328 ATACCTTCCTTGTCTTGGATTTTTTGCTTGACGTTTTCGATGCTATCAGAGGATTCGACC 16387 Query 35690 TCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCATT 35737 |||| ||||| || || || || | ||||| ||||| || |||||| Sbjct 16388 TCCAAAGTGATGGTCTTGCCAGTAAGTGTTTTAACAAAGATTTGCATT 16435 Score = 87.8 bits (96), Expect = 2e-12 Identities = 134/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 35546 TCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAAT 35605 |||||||| |||||||| || ||| || || |||| |||| || ||||| || || Sbjct 15560 TCCTTTTGGATGTTGTAGTCACTCAAAGTGCGACCGTCTTCCAATTGTTTACCAGCGAAA 15619 Query 35606 ATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTT 35665 || | || ||||| || | ||||| || |||||| || ||||||||||| | | | Sbjct 15620 ATGAGACGTTGCTGATCAGGAGGAATGCCCTCCTTATCTTGAATCTTTTGCTTGACATTC 15679 Query 35666 GCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACA 35725 | | | || || || || |||| ||||| || ||||| |||||||| || || Sbjct 15680 TCAATGCTATCAGAAGACTCGACTTCCAAAGTGATGGTCTTACCAGTCAAAGTCTTGACG 15739 Query 35726 AATATCTGCAT 35736 || || ||||| Sbjct 15740 AAAATTTGCAT 15750 Score = 87.8 bits (96), Expect = 2e-12 Identities = 134/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 35546 TCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAAT 35605 |||||||| |||||||| || ||| || || |||| |||| || ||||| || || Sbjct 16016 TCCTTTTGGATGTTGTAGTCACTCAAAGTGCGACCGTCTTCCAATTGTTTACCAGCGAAA 16075 Query 35606 ATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTT 35665 || | || ||||| || | ||||| || |||||| || ||||||||||| | | | Sbjct 16076 ATGAGACGTTGCTGATCAGGAGGAATGCCCTCCTTATCTTGAATCTTTTGCTTGACATTC 16135 Query 35666 GCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACA 35725 | | | || || || || |||| ||||| || ||||| |||||||| || || Sbjct 16136 TCAATGCTATCAGAAGACTCGACTTCCAAAGTGATGGTCTTACCAGTCAAAGTCTTGACG 16195 Query 35726 AATATCTGCAT 35736 || || ||||| Sbjct 16196 AAAATTTGCAT 16206 Score = 84.2 bits (92), Expect = 2e-11 Identities = 133/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 35546 TCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAAT 35605 ||||||||||| ||||| || ||| || || |||| |||| || ||||| ||||| Sbjct 15104 TCCTTTTGAATATTGTAGTCACTCAAAGTACGACCGTCTTCCAATTGTTTACCAGCAAAG 15163 Query 35606 ATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTT 35665 ||||| ||||| || || | ||||| | |||||| || ||||||||||| | | | Sbjct 15164 ATCAAACGCTGTTGATCAGGAGGAATTCCCTCCTTATCTTGAATCTTTTGCTTGACATTC 15223 Query 35666 GCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACA 35725 | | | || || || || |||| || || || ||||| || | ||| || || Sbjct 15224 TCAATGCTATCAGAAGACTCGACTTCCAAAGTAATGGTCTTACCAGTGAGAGTCTTGACG 15283 Query 35726 AATATCTGCAT 35736 || || ||||| Sbjct 15284 AAAATTTGCAT 15294 >seq2614 Length=127402 Score = 105 bits (116), Expect = 6e-18 Identities = 138/191 (72%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 35546 TCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAAT 35605 |||||||||||||||||||| ||| || || | || || ||||||||||| ||||| Sbjct 59147 TCCTTTTGAATGTTGTAATCACTCAAAGTACGACCATCTTCGAGCTGCTTACCAGCAAAG 59088 Query 35606 ATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTT 35665 ||||| || ||||| || | ||||| | |||||||| ||||||||||| | | Sbjct 59087 ATCAAACGTTGCTGATCAGGAGGAATACCTTCCTTGTCTTGAATCTTTTGCTTGACGTTC 59028 Query 35666 GCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACA 35725 | | | || ||||| || |||| || || |||||||| || | ||||| || Sbjct 59027 TCAATACTATCAGAAGATTCGACTTCCAAGGTAATGGTTTTACCAGTAAGGGTTTTGACG 58968 Query 35726 AATATCTGCAT 35736 || |||||||| Sbjct 58967 AAAATCTGCAT 58957 Score = 87.8 bits (96), Expect = 2e-12 Identities = 134/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 35546 TCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAAT 35605 || |||||||||||||| || | | ||| || | || || | || ||||| ||||| Sbjct 59375 TCTTTTTGAATGTTGTAGTCTGAAAGGGTACGGCCATCTTCTAATTGTTTACCAGCAAAG 59316 Query 35606 ATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTT 35665 ||||| || || ||||| | ||||| | |||||||| ||||||||||| | | || Sbjct 59315 ATCAAACGTTGTTGGTCAGGAGGAATCCCTTCCTTGTCTTGAATCTTTTGCTTTACATTT 59256 Query 35666 GCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACA 35725 | | | || || || || || | ||||| |||||||| || | ||||| || Sbjct 59255 TCAATACTATCAGAAGACTCAACTTCTAAAGTGATGGTTTTACCAGTAAGGGTTTTGACG 59196 Query 35726 AATATCTGCAT 35736 || |||||||| Sbjct 59195 AAAATCTGCAT 59185 Score = 84.2 bits (92), Expect = 2e-11 Identities = 133/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 35546 TCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAAT 35605 ||||||||||||||||| || | | ||| || | || || || || ||||| ||||| Sbjct 58919 TCCTTTTGAATGTTGTAGTCTGAAAGGGTACGACCATCTTCGAGTTGTTTACCAGCAAAA 58860 Query 35606 ATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTT 35665 || | || || ||||| | ||||| | |||||||| |||||||||||| | | || Sbjct 58859 ATGAGACGTTGTTGGTCTGGAGGAATACCTTCCTTGTCTTGGATCTTTTGCTTTACATTT 58800 Query 35666 GCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACA 35725 | | | || ||||| || || | ||||| || || || || | || || ||| Sbjct 58799 TCGATGCTATCAGAAGATTCGACTTCTAAAGTGATAGTCTTTCCTGTAAGGGTCTTTACA 58740 Query 35726 AATATCTGCAT 35736 || || ||||| Sbjct 58739 AAGATTTGCAT 58729 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 450767870955280