Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopus_20oryzae_20[genbank_20GCA_5F000697195.1_202014-06-02] 4,566 sequences; 42,900,422 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq2389 354 1e-92 seq3946 178 2e-39 seq4556 116 5e-21 >seq2389 Length=30206 Score = 354 bits (392), Expect = 1e-92 Identities = 812/1203 (67%), Gaps = 32/1203 (3%) Strand=Plus/Plus Query 69286 TTACAAACTGCTACCTCATTAGAATTTGCATATTGTATTATCTCTGTACATAGATTACTA 69345 |||||||| || || |||| | | ||| ||||| | || || ||||| || |||||| Sbjct 12431 TTACAAACAGCAACTTCATCGGGACTTGTATATTCGACAATTTCCGTACAAAGGTTACTA 12490 Query 69346 CATTTGATAGTCCCCAGATTTTGCTGATTACTCTTTTTGTTACAGGCGTCCTTGTAAAGA 69405 ||||| || || |||| ||||||||||| |||||| | ||||| || |||||||| || Sbjct 12491 CATTTAATGGTACCCAAGTTTTGCTGATTGCTCTTTCTATTACAAGCATCCTTGTAGAGC 12550 Query 69406 ATAAACGGAGTACCAGTTTCAATCTGAGATTCGATAATAGATTTCCA-AACGACCCTAGC 69464 ||||| ||| |||| |||||| | || | ||| | |||| | ||| ||| | || Sbjct 12551 ATAAATGGATTACCGGTTTCAGTTTGTGCTTCCAAGATAGCATACCATAACTTTTGT-GC 12609 Query 69465 ATTTATTACGGTCT-TGTAACGCTTC--TCTTTTTCATA--TTGTGTATATAGCCGTTCG 69519 || ||| |||| | | | |||| || |||||| || || | |||| | Sbjct 12610 CTTAATT---GTCTCTCTCGCTCTTCCTTCGCGTTCATAGCTTTCATAAAGAGCCA--CA 12664 Query 69520 AATTCATCTCCCCAAACATCATCCAATCCAGGACATTCATTTGGACACATCAATGACCAC 69579 || ||||| ||||||||||| | ||| ||||| |||||| ||||| | | ||||| Sbjct 12665 AACTCATCACCCCAAACATCTTGCAAACCAGGTGCTTCATTAGGACAAAAGAGAGACCAA 12724 Query 69580 ACATCATCATCCTTAACTCGTTTCATAAATAGATCGGGAATCCAAAGAGCTATAAAGAGA 69639 | || | ||||| || |||| ||| || |||||||| | |||||| || ||| | | Sbjct 12725 TCTCCACCGTCCTTGACACGTTGCATGAAGAGATCGGGTACCCAAAGGGCATAAAACAAA 12784 Query 69640 TCTCTGGTTCTATTTTCTTCATTTCCTGTAttttttttAAGATCGAGAAACTCCATAATA 69699 || | || ||| |||| || || || || ||| | | ||| | ||| | ||| Sbjct 12785 TCACGGGCTCTGATTTCATCCTTACCAAAGTTCTTTCTTAAATCTAAAAAGGTAAAGATA 12844 Query 69700 TCAGAATGCCATGGTTCTAGATATATCGCCATGACTCCCGGTCGTTTATTTCCTCCCTGA 69759 |||| ||||||||| || ||||| || || | | |||| || || || || || || ||| Sbjct 12845 TCAGCATGCCATGGCTCGAGATACATGGCAAAGGCTCCTGGACGCTTGTTGCCGCCTTGA 12904 Query 69760 TCTATGTATCTGGCAGTGTTATTATAGACTCTCAGCATCGGAATAATACCATTAGATTTA 69819 || | || | || |||||||| | || | || ||| |||| | ||| || || | | Sbjct 12905 TCGACATAACGTGCTGTGTTATTGAATACACGCAACATGGGAAGCAAACCGTTCGAATAA 12964 Query 69820 CCATTTGTTCCAGAAATATAACTTCCTCTTGCGCGAATATTACTAATAGATAGACCTATT 69879 |||||||| || | |||||| ||| | || ||||||||| ||| ||||| || Sbjct 12965 CCATTTGTACCGGCAATATAGGATCCATTGGCACGAATATTATGAATGTTGAGACCGATA 13024 Query 69880 CCTCCTGCCATTTTAGAGATTAGAGCACAACGTTTCAATGTGTCATATATACCCTCTATG 69939 || ||||| |||| || ||| | ||||| ||| ||||| ||||| || || || || Sbjct 13025 CCACCTGCAGTTTTCGAAATTTGGGCACAGATTTTTAATGTTTCATAGATGCCTTCAATT 13084 Query 69940 CTATCATCTATCATGTTAAG-AAGAA--AACAGCTAGACATTTGATGATGTATAGTTCCC 69996 ||| || ||||| | || ||||| || || ||||| ||| || | || || Sbjct 13085 GAATCTTCCTTCATGGTGAGCAAGAAGCAAGAG---GACATCTGAGGACGAGGTGTACCG 13141 Query 69997 GCATTAAATAATGTAGGAGATGCGTGAGTGAACCATTTTTCAGAAAGCAGATTGTATGTT 70056 ||||| || || |||||| || ||||| || |||| || || | || ||||| || Sbjct 13142 GCATTGAACAAAGTAGGACTGGCATGAGTAAAGAATTTCTCGGACATCAAGTTGTAAGTC 13201 Query 70057 TCAATAGCTGATTCTATATC-CCACTGATGAATTCCTATCGCGACACGCATCAACATATG 70115 || || || | || ||||| ||| | || || || || ||||||||||| | | ||| Sbjct 13202 TCGATTGCAGCGTCAATATCTTCACCG-TGGATACCAATGGCGACACGCATGATAAGATG 13260 Query 70116 CTGAGGTCGTTCTACCGTTTTATTATTTATTTTCAACAGGTATGATTTTTCCAGAGTTTT 70175 ||||| || || | || || | || || | || || ||| ||| ||||| || Sbjct 13261 TTGAGGACGCTCGGCGGTCTTGCCGTCAATCTTGAGTAGATAGGATCGTTCAAGAGTCTT 13320 Query 70176 AAACCCAAAATAGTTGTATGAAAAGTCTCTTTCGTAAATAATAACAGAATTTAG--TTTA 70233 || |||||| |||||||| || ||||| || |||||||| | || || || || Sbjct 13321 GAATCCAAAAAAGTTGTATTTGAAATCTCTGTCATAAATAATGGCTGAGTTCAGACGTTC 13380 Query 70234 TCCTTATATTTGGTAACTATATCCATAACAGTAGGT---GAGATAATCGGAGATCGTTTA 70290 | | | | | | | | | || || || | | || || || || || | || Sbjct 13381 TGCGT---TGTCCTGA--ACAACCTTATAGGTTGTTTCGGATATCATGGGGGAGTGCTTG 13435 Query 70291 CCATTTTTAGGATTAACATAGTTGAATAAATCTTCCATTACATCACTAAATAGttttttt 70350 | | || ||||| ||||||||| | | ||| || || || | | ||||| || ||| Sbjct 13436 CTTGTCTTGGGATTCACATAGTTGTAGAGATCCTCAATCACTTGAGAAAATACCTTCTTT 13495 Query 70351 GTTTCCTTGTGTAAATTTGATATGGCTATTCTGGCTGCTAGAATAGCATAGTCAGGATGT 70410 ||||||||||||||||| || || || | || || | | || ||||| ||||| Sbjct 13496 GTTTCCTTGTGTAAATTACTAATTGCAATACGAGCAGCCAAGAGTGCGTAGTCGGGATGA 13555 Query 70411 TGTGTAGTACAAGTA-GCTGCTATTTCCGCAGCTAACGTATCTAATTCTATAGTTGTAAC 70469 | || || || || || || |||| ||||| | | || | ||| | ||| || || Sbjct 13556 CGAGTGGT-CATATATGCAGCGGTTTCAGCAGCAAGGTTGTCAAGTTCAACAGTAGTTAC 13614 Query 70470 TCC 70472 ||| Sbjct 13615 TCC 13617 Score = 210 bits (232), Expect = 3e-49 Identities = 533/805 (66%), Gaps = 13/805 (2%) Strand=Plus/Plus Query 68403 TGTACGTAGATAGTACATACCGGTTTTCAGACCTAGACTCCATCCGTAGAAATGCATACT 68462 |||||| | ||| |||||||| || |||| || ||| || ||||| |||||||| Sbjct 11481 TGTACGCAAATAATACATACCCGTCTTCAATCCCTTTTGCCAACCATAGAAGTGCATACT 11540 Query 68463 TGTTAGTTTGGAATAACTTGGATCGGCTATATGAATATTCATCGATTGACTTTGATCGAT 68522 ||| || || | | | || || || ||| || |||| |||||||||||| || Sbjct 11541 TGTCAGCTTACCAAAGTTGGGTTCAGCAATAAAGATGTTCAAACTTTGACTTTGATCAAT 11600 Query 68523 GAAAGCTCCTCTATCTGCCGCCATTTTTATAATACTCTTTTGAGGAATTTCCCAAATAGT 68582 | | || || | || || ||||| | | ||| | ||||| ||||||||||| ||| Sbjct 11601 GTAGGCGCCACGGTCAGCGGCCATATCAACAATTGTACGTTGAGAAATTTCCCAAACAGT 11660 Query 68583 CTTAAAAATCTGTTTGATATCATCTGGAAGGCTCGT---ATTTTGAATGGATCCACCATC 68639 ||| | | || ||||| | | |||| | | |||||||| ||||||||||| Sbjct 11661 CTTGTAGAGCTCTTTGAGGTGTTGAGGAATTGTGGGTACATTTTGAACAGATCCACCATC 11720 Query 68640 GGATATAATTATATTCTTGATCTCATCATTCCACAATTTTCTCTCCGTTAAAACTCTAAG 68699 || || || || ||||||| ||||| ||||| | | || ||| | | ||| Sbjct 11721 GGCCATGATCATGTTCTTGACTTCATCGTTCCAGATACCCATATCAACCAAATCACGAAG 11780 Query 68700 GAGATGCGGATTAACTATTTGAAATTCCCCAGATAACACTCTACGAGTGTAAATATTACT 68759 | || || || |||||| |||| || || | ||| | ||| || |||| || Sbjct 11781 TAACCAAGGGTTGACCATTTGATATTCACCCGAGAGCACACGACGGGTATAAAAGTTGGA 11840 Query 68760 GGTATATGGTTCCACAGATTCATTATTTCCCAGAATTTGAGCAGTTGATGCAGTTGGCAT 68819 || || || || | | ||||| |||| ||||||| || || || || ||||| Sbjct 11841 AGTGTAAGGCTCAAAGCACTCATTGAAACCCAACATTTGAGAGGTGGAAGCGGTAGGCAT 11900 Query 68820 AGGTGCCACCAATAAACTATTTCTAAGACCATGTGTTATGATTTTATCTTTTAGATGTTT 68879 ||| || | || | ||| | | ||||| | || || || ||||| Sbjct 11901 AGGGGCTAATAAGAGTGAATTGCGGACGCCATGCTTGGCTATCTTTTCCTTTAGTGAAGC 11960 Query 68880 CCAATCCCAAAGATCAGATGGTACA-ACATTCCAAAGATCGTATTGTAGAATTCCGTTAC 68938 ||| ||||||||| || ||| | |||||||| | |||||||||| || || | Sbjct 11961 CCAGTCCCAAAGAG-AGGTGGGAGTCACATTCCACATGTCGTATTGTAATATGCC----C 12015 Query 68939 TTGCATAT--GAT--CCATTATATGTTTCATAAGGTCCTTCCTGTTCAGCTAGTTCACAA 68994 ||| ||| || || | ||| |||||||||||||| | || |||||| | ||| || Sbjct 12016 TTGGATACAGGACTACCCTCATAAGTTTCATAAGGTCCGTACTTTTCAGCCAATTCGCAT 12075 Query 68995 CTTGCCTCTAATGCACCGTAATAAATTGTTTCGAAAATCTTCTTATTGAGATCTTGTGCT 69054 || || || ||| ||| ||| || ||||| || || | |||| | | || ||| Sbjct 12076 GAGGCTTCCAAGGCAGCGTGATAGATGGTTTCAAAGATTTGAATATTTAATTGTTTGGCT 12135 Query 69055 TCTAGACTATCGAATGGATAATGTAAAAGAATAAATGCATCTGCCAATCCCTGAACCCCA 69114 || || || || || ||| |||| || |||| || || ||||| || || || Sbjct 12136 TCAGGAGAGTCAAAGGGGTAACGTAAGGCCATGAATGTGTCGGCTAATCCTTGGACACCT 12195 Query 69115 ATACCGATAGGTCTATGTCTCTTATTTGAACTTTCAGCTTCTGGAATAGGATAATAATTA 69174 | ||||||||| | ||||||||| ||||| ||||| ||||| | ||| ||||| || Sbjct 12196 AAACCGATAGGACGATGTCTCTTGTTTGATCTTTCTGCTTCAATGACAGGGTAATAGTTG 12255 Query 69175 ATATCTATAATTTTATTAAGATTTC 69199 ||||| ||||| || || | |||| Sbjct 12256 ATATCGATAATCTTGTTCAAGTTTC 12280 >seq3946 Length=52427 Score = 178 bits (196), Expect = 2e-39 Identities = 235/323 (73%), Gaps = 5/323 (2%) Strand=Plus/Plus Query 39837 TTGTTTCTATAGCATTAAAGAGATAATGTTTTTCATCACTATCTTTAACATATGTATCTA 39896 |||| || |||||| || || | |||||| ||| |||||| | ||| ||||| | Sbjct 26598 TTGTATCAATAGCAGAGAAAAGCATTTCTTTTTCTTCATCATCTTTTATATAGGTATCAA 26657 Query 39897 TTAACAGACTATACATTTCTGAATGGATGTTTTCAATCGCCATCTGAAATCCGTAAAAAC 39956 | || ||||| || ||||||| || || ||||||||| || ||||| || ||||||| Sbjct 26658 TCAAAAGACTGTATGTTTCTGAGTGAATATTTTCAATCATGATTTGAAAGCCATAAAAAC 26717 Query 39957 ATCTTGCTTCAGTAATTTGTACCTCTGAACAAAATCTTTCCGCCAAATTTTCATTCACTA 40016 || | ||||||| ||||| || || |||||| ||| | ||||||||||||| || | Sbjct 26718 ATTTAGCTTCAGGAATTTTGACTTCATCACAAAAGTTTTGCACCAAATTTTCATTTACAA 26777 Query 40017 TTCCATCACTAGC-GGCAAAAAATGCCAATACATGTTTAATAAAATATTTTTCATCGGGT 40075 | |||||| ||| |||||| || ||||| || | ||||||| || |||| Sbjct 26778 TACCATCA-GAGCTGGCAAAGAAAGCCAAAACGCGAGAAATAAAAAATCGCTCATTCTCA 26836 Query 40076 GTCAATTTATT---CCAGTCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAA 40132 |||| ||| || ||| ||||| |||| | || ||||| |||||||||||||||| Sbjct 26837 GTCATTTTGTTTTCCCAATCATTTTGATCTCTACTTAAATCTATTTCTTCAGCTGTCCAA 26896 Query 40133 AACGACGCCTCTGCCTTTTTGTA 40155 || || || |||||||| || || Sbjct 26897 AAAGATGCTTCTGCCTTCTTATA 26919 Score = 161 bits (178), Expect = 1e-34 Identities = 302/444 (68%), Gaps = 0/444 (0%) Strand=Plus/Plus Query 39328 TTGGTATTCACCAACGCGTTTCTCGAAAAAATTAGTTTTGCCTTCCAATGATATATTTTC 39387 ||| || ||| |||||| || || ||||| || || || |||| || ||| || | || Sbjct 26031 TTGATAATCAGAAACGCGCTTTTCAAAAAAGTTGGTCTTTCCTTGCAGTGAAATCATATC 26090 Query 39388 CATGAAATCAAACGGATTAGTTGCATTATAtttttttttAAATCCTAATTCTGAAATCAA 39447 ||| || ||||||||||| ||||| |||| |||| | || || | | || | Sbjct 26091 CATAAAGTCAAACGGATTCGTTGCCATATAAATTTTATCGAACCCAAGAGCAACCATAAG 26150 Query 39448 TCTATCTGCAACAAATTCTATGTATGTTTTCATCATTTCACAATTCATTCCTATGAGTTT 39507 | ||| ||||| ||||| |||||| ||||| | ||||||| || || | | Sbjct 26151 ACGATCAGCAACGAATTCAATGTATTGACACATCAAAGTAGAATTCATACCAATCAATGC 26210 Query 39508 AACTGGTAGAGCCTCCGTTAGAAACTCTTTTTCGATGTCTACGGCCTCTGTTATTATCGA 39567 ||| |||| || || |||| || |||| ||| ||| |||| || || |||| || Sbjct 26211 AACAGGTAATGCATCGGTTAAGAATTCTTGTTCAATGCCTACAGCTTCCATTATAATATC 26270 Query 39568 TGTTACTACCTCATCACTCGGTGGATGCAATAAATGTTTAAACATTAAGCAGGCGAAGTC 39627 | || | | || ||| | | | ||| |||||| | || ||||| || Sbjct 26271 CTTCACACGTTGTTGGCTAGGTTGTTTACGAATATGAGTAAACAAAAGACAAGCGAAATC 26330 Query 39628 ACAATGTAGGCCCTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGTCCAGGCATTAG 39687 ||| || || || || | || ||| ||||| ||| ||| || | || ||||| | Sbjct 26331 GGTATGAAGACCTTCGTCACGACAAATCAATTCATTACTAAAAGTCAAACCGGGCATCAA 26390 Query 39688 ACCACGCTTTTTGAGCCAAAATATGGCAGCAAAAGATCCAGAAAAGAAGATGCCTTCTAC 39747 |||||| || || |||||||| || | |||||| || || |||||||| || |||||||| Sbjct 26391 ACCACGTTTCTTAAGCCAAAAAATAGAAGCAAATGAGCCGGAAAAGAATATACCTTCTAC 26450 Query 39748 TGCTGCAAATGCAACAAGTCTCTC 39771 ||| ||||| |||||||| | ||| Sbjct 26451 TGCAGCAAAAGCAACAAGACGCTC 26474 >seq4556 Length=51470 Score = 116 bits (128), Expect = 5e-21 Identities = 218/320 (68%), Gaps = 3/320 (1%) Strand=Plus/Plus Query 39839 GTTTCTATAGCATTAAAGAGATAATGTTTTTCATCACTATCTTTAACATATGTATCTATT 39898 || || |||||| |||||| | ||||| | ||||||||| || ||||| || Sbjct 10143 GTATCGATAGCAGAAAAGAGCATTTCCTTTTCTTGGTTATCTTTAATGTAGGTATCAATC 10202 Query 39899 AACAGACTATACATTTCTGAATGGATGTTTTCAATCGCCATCTGAAATCCGTAAAAACAT 39958 || ||||| || |||| | ||| |||||||||||| ||||| || || ||||||||| Sbjct 10203 AAGAGACTGTAAGTTTCAGCATGAATGTTTTCAATCATGATCTGGAAACCATAAAAACAT 10262 Query 39959 CTTGCTTCAGTAATTTGTACCTCTGAACAAAATCTTTCCGCCAAATTTTCATTCACTATT 40018 | ||||| | ||| | || || |||||| ||| |||| || |||||||| || Sbjct 10263 TTGGCTTCGGGAATCTTGACTTCATCACAAAAGTTTTGTACCAAGTTCTCATTCACGATA 10322 Query 40019 CCATCACTAGCGGCAAAAAATGCCAATACATGTTTAATAAAATATTTTTCATCGGGTGTC 40078 ||||| | ||||| || ||||| ||| | ||||| | ||| | | | Sbjct 10323 CCATCTGAGCCAGCAAAGAAGGCCAAGACACGAGAGATAAAGAAACGTTCGTTTTCAGAC 10382 Query 40079 AATTTATT---CCAGTCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAAAAC 40135 | |||||| |||||||| ||| || | || | ||||| || |||||||| Sbjct 10383 ATTTTATTTTCCCAGTCATGCTGATCCTTGCTCAAGTCAATCTCTTCTGCGGTCCAAAAG 10442 Query 40136 GACGCCTCTGCCTTTTTGTA 40155 || || ||||||||||| || Sbjct 10443 GAAGCTTCTGCCTTTTTATA 10462 Score = 105 bits (116), Expect = 9e-18 Identities = 286/438 (65%), Gaps = 0/438 (0%) Strand=Plus/Plus Query 39328 TTGGTATTCACCAACGCGTTTCTCGAAAAAATTAGTTTTGCCTTCCAATGATATATTTTC 39387 ||| || ||| ||| || || || ||||| || || ||||||| | || || | || Sbjct 9583 TTGATAATCAGAAACACGCTTTTCAAAAAAGTTGGTCTTGCCTTGAAGGGAGATCATGTC 9642 Query 39388 CATGAAATCAAACGGATTAGTTGCATTATAtttttttttAAATCCTAATTCTGAAATCAA 39447 ||| || || || || ||||| ||||| || | || | ||||| | | || | Sbjct 9643 CATAAAGTCGAATGGGTTAGTAGCATTGTAAATCTTGTCGAATCCAAGAGCGACCATGAG 9702 Query 39448 TCTATCTGCAACAAATTCTATGTATGTTTTCATCATTTCACAATTCATTCCTATGAGTTT 39507 | ||| || || ||||| || || ||||| | ||||| || || | | Sbjct 9703 ACGATCAGCGACGAATTCGATATACTGACACATCAAGGTAGCGTTCATACCGATCAATGC 9762 Query 39508 AACTGGTAGAGCCTCCGTTAGAAACTCTTTTTCGATGTCTACGGCCTCTGTTATTATCGA 39567 ||| || ||||| |||| || || |||| |||||| | ||||| ||| || || Sbjct 9763 AACAGGCAGAGCATCCGACAGGAATTCTTGTTCGATACCGACGGCTTCTACAATGATGTC 9822 Query 39568 TGTTACTACCTCATCACTCGGTGGATGCAATAAATGTTTAAACATTAAGCAGGCGAAGTC 39627 | || | | ||| ||| | | | || | |||| | ||||| ||||| Sbjct 9823 CTTGACGCGTTGTTGACTGGGTTGTTTACGGATGTGGGTGAACAAGAGACAGGCAAAGTC 9882 Query 39628 ACAATGTAGGCCCTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGTCCAGGCATTAG 39687 | || || || ||||| | || || ||||| ||| ||| || | || ||||| | Sbjct 9883 AGTGTGAAGACCTTCATCACGACAGATCAATTCATTACTAAAGGTCAAACCGGGCATCAA 9942 Query 39688 ACCACGCTTTTTGAGCCAAAATATGGCAGCAAAAGATCCAGAAAAGAAGATGCCTTCTAC 39747 |||||| || || | |||||| |||| || || || |||||||||||||||||||| || Sbjct 9943 ACCACGTTTCTTTAACCAAAAGATGGAGGCGAATGAGCCAGAAAAGAAGATGCCTTCGAC 10002 Query 39748 TGCTGCAAATGCAACAAG 39765 || ||||| || || || Sbjct 10003 AGCGGCAAAGGCGACCAG 10020 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 686869594680240