Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopus_20oryzae_20[genbank_20GCA_5F000697195.1_202014-06-02] 4,566 sequences; 42,900,422 total letters Query= NC_027925.1 Length=496396 Score E Sequences producing significant alignments: (Bits) Value seq4556 104 7e-17 >seq4556 Length=51470 Score = 104 bits (114), Expect = 7e-17 Identities = 131/178 (74%), Gaps = 4/178 (2%) Strand=Plus/Minus Query 443706 GAGCGACTAGTCGCTTTTGCTGTGGTCGAAGGACTGTTGTTTAGCGGCAGCTTTAGCCTC 443765 || || || ||||| ||||| | |||||||| | || ||| ||| | || ||||| Sbjct 10026 GAACGTCTGGTCGCCTTTGCCGCTGTCGAAGGCATCTTCTTTTCTGGCT-CATTCGCCTC 9968 Query 443766 CATCTTCTGGTTGAAAAAGCGTGGACTTATGCACGGTCTGACCTTTAGTAACGAACTGAT 443825 |||||| ||||| || || ||||| | |||| |||| ||||||||||||| ||| |||| Sbjct 9967 CATCTTTTGGTTAAAGAAACGTGGTTTGATGCCCGGTTTGACCTTTAGTAATGAATTGAT 9908 Query 443826 CAGTCGGGACGAGGGTTTGCATTGCGACTTCGCCTGTCTTCTCTACACCAAACACATC 443883 | |||| || || ||| | || ||||| |||||||| | | |||| |||||| Sbjct 9907 CTGTCGTGATGAAGGTCTTCACACTGACTTTGCCTGTCTCTTGTTCACC---CACATC 9853 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1588243079365870