Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopus_20oryzae_20[genbank_20GCA_5F000697195.1_202014-06-02] 4,566 sequences; 42,900,422 total letters Query= NC_028099.1 Length=122522 Score E Sequences producing significant alignments: (Bits) Value seq2418 118 8e-22 >seq2418 Length=25572 Score = 118 bits (130), Expect = 8e-22 Identities = 356/549 (65%), Gaps = 28/549 (5%) Strand=Plus/Plus Query 111593 GAGGTCTATAATTCTCCAATTCAAAGTCATCAGCAACAAAATCGTCAATGCAAGCAACTC 111652 |||| ||||||| |||||| |||| || ||| || || || || | ||| | Sbjct 13787 GAGGATTATAATTTTCCAATACAAAATCTTCAAATTTGAAGTCATCTATAGAGTCAATTT 13846 Query 111653 TTCGTTTAATTTTTAGTTTTGGAAAGGGGGTAGGCTTTCGGGTAAGCTGTAATTGTAAAG 111712 | || || || ||||| |||| || | |||||| || | | || || || | Sbjct 13847 TACGATTGATCCTTAGTGTTGGGAAAGACCTAGGCTCGCGTGCTACTTGCTGTTTCAATG 13906 Query 111713 GCTGTATGTGATTTAAATAAACATGCGCATCTCCTATACAATGGATCAATTCCCAAGGCT 111772 | | ||||| | |||||||| | ||| || ||| ||| || ||||| | ||| | Sbjct 13907 CATCCAAGTGATCAATGTAAACATGTGTATCACCCATAGTATGTATAAATTCTCCAGGAT 13966 Query 111773 CCAAACCAGTGATGTGTGCAATCATGTATGTGAGTAGACTGTAACTAGCAATGTTAAATG 111832 ||||| | || | ||||||||||||| || | || || |||||| ||||| | Sbjct 13967 CCAAATCTGTTACGTGTGCAATCATGCGAGTCAAGAGCGCATAGGAAGCAATATTAAAAG 14026 Query 111833 GCACACCTAGGCCCATATCTCCCGATCTTTGATATAGCTGACATGATAGTTT-------- 111884 | ||||||| |||||||| | |||| ||||| ||| ||| |||||||| Sbjct 14027 GTACACCTAACCCCATATCGCAAGATCGCTGATAAAGCACACAAGATAGTTTAGCACGTC 14086 Query 111885 ----ATTT---------TGTGACACATAAAATTGACAAAGTACATGACAAGGAGGCAATG 111931 || | | || |||||||| ||||||| ||||||||||||| || | Sbjct 14087 CACCATCTGAAGGCGGATTGGAAACATAAAACTGACAAAAAGCATGACAAGGAGGTAAAG 14146 Query 111932 CCATCCCATTCATA----AAGGGTCCCCATGCACACATGATCATCCTTCT-GCTGTAGCG 111986 |||| | ||| ||| | ||| ||| | | || || | ||| |||| | | Sbjct 14147 CCATTATAGGAATATCTGCAGGAT-TCCAAGCAGAGAGAATAATTCGTCTATCTGTTG-G 14204 Query 111987 ATTATGTTCAATGTCGTGTATGACATTCAAGAGCTGGTCTATCCCTTTACCAGTATAATC 112046 ||||| || |||| | ||| || | | | ||| || || |||| |||| |||| || Sbjct 14205 ATTATTTTTAATGGTATCTATCACTTGCTGTAACTGATCAATGCCTTGACCACTATAGTC 14264 Query 112047 CGCCTGACATCCAGTGTATGTTGCCCCATAGTGTCTCCATTGGAATCCATAAATAGGCCC 112106 | | ||| || ||| | || ||| |||||||||| ||||| ||||| | || || Sbjct 14265 AGTATCACAATCAACGTACTTGGCTCCAAAGTGTCTCCACTGGAACCCATAGACTGGACC 14324 Query 112107 CAGATCTCC 112115 ||||| || Sbjct 14325 AAGATCACC 14333 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 391923788962258