Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopus_20oryzae_20[genbank_20GCA_5F000697195.1_202014-06-02] 4,566 sequences; 42,900,422 total letters Query= NC_029255.1 Length=129563 Score E Sequences producing significant alignments: (Bits) Value seq2418 93.3 3e-14 >seq2418 Length=25572 Score = 93.3 bits (102), Expect = 3e-14 Identities = 173/254 (68%), Gaps = 0/254 (0%) Strand=Plus/Plus Query 118357 TTGTAGTTTTCCAAAATAAAATCTTCAAACTTAAAGTCTTCTATATTTTTGATATCCTTG 118416 || || |||||||| | |||||||||||| || ||||| |||||| | || | Sbjct 13792 TTATAATTTTCCAATACAAAATCTTCAAATTTGAAGTCATCTATAGAGTCAATTTTACGA 13851 Query 118417 TTTATGGATAGTGTGGGAAACGGGAGAGGCTCCCTTGTGAGTTGGAGTTTCAGTGGCTCA 118476 || || |||||| || || | |||||| | || | ||| |||||| || || Sbjct 13852 TTGATCCTTAGTGTTGGGAAAGACCTAGGCTCGCGTGCTACTTGCTGTTTCAATGCATCC 13911 Query 118477 ATGTGATTCATATAGACATGAGCATCCCCAATTGTATGTATGAATTCACCAGGTGTAAGC 118536 | ||||| || || ||||| | ||| || || |||||||| ||||| ||||| | Sbjct 13912 AAGTGATCAATGTAAACATGTGTATCACCCATAGTATGTATAAATTCTCCAGGATCCAAA 13971 Query 118537 CCTGTCAGGTGAGCAATCATGTATGTCAACAAACTGTAGCTGGCTACATTAAAAGGAACA 118596 |||| | ||| ||||||||| ||||| | ||| || | ||||||||| ||| Sbjct 13972 TCTGTTACGTGTGCAATCATGCGAGTCAAGAGCGCATAGGAAGCAATATTAAAAGGTACA 14031 Query 118597 CCCAGACCCATGTC 118610 || | ||||| || Sbjct 14032 CCTAACCCCATATC 14045 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 414453735143224