Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopus_20oryzae_20[genbank_20GCA_5F000697195.1_202014-06-02] 4,566 sequences; 42,900,422 total letters Query= NC_030240.1 Length=128058 Score E Sequences producing significant alignments: (Bits) Value seq2600 96.9 3e-15 >seq2600 Length=207564 Score = 96.9 bits (106), Expect = 3e-15 Identities = 164/236 (69%), Gaps = 4/236 (2%) Strand=Plus/Minus Query 101005 ACTATTGCCGCCTCGCAATCTTAACACCATGTGCAAAGTTGATTCTTTTTGAATATTGTA 101064 |||||| || |||| || | ||| |||| || | |||||||| ||||| ||||| || Sbjct 124529 ACTATTTCCACCTCTTAAACGTAATACCAAATGGAGTGTTGATTCCTTTTGTATATTATA 124470 Query 101065 ATCGGCCATAGTTTTGGA--ATCTTCCAATTGTTTGCCCGCATATATAAGCCTTTGTTGG 101122 |||| | || | | || |||||| | ||||||||| ||| | ||||| |||||||| Sbjct 124469 ATCG--CTTAATGTACGACCATCTTCTAGTTGTTTGCCAGCAAAGATAAGTCTTTGTTGA 124412 Query 101123 TCTACGGGCACGCCTTCTTTGTCGGCAATTTTTTGTTTCACATCGGCCACCGTCTCTGTG 101182 ||| || | ||||||||||| |||||| |||||||| | | || || | Sbjct 124411 TCTGGTGGAATACCTTCTTTGTCTTGAATTTTACTTTTCACATTATCAATGGTATCGGAA 124352 Query 101183 GACGTTGTTTCGACGGTAATAGTTTTGCCCGTCAATGTTTTAATAAAAATTTGCAT 101238 || ||| | || || |||||||| || | || || | ||| |||||||| Sbjct 124351 GATTCAACTTCTAATGTGATTGTTTTGCCTGTAAGAGTCTTGACAAATATTTGCAT 124296 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 409638003144594