Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopus_20oryzae_20[genbank_20GCA_5F000697195.1_202014-06-02] 4,566 sequences; 42,900,422 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq2389 316 3e-81 seq3946 170 3e-37 seq4556 167 3e-36 >seq2389 Length=30206 Score = 316 bits (350), Expect = 3e-81 Identities = 744/1112 (67%), Gaps = 22/1112 (2%) Strand=Plus/Plus Query 77676 AAAGCTATAGATGCTAGATTACAAACTGCTACCTCATTAGCGTTGGCATATTGTATTATC 77735 ||||| ||||| || | |||||||| || || |||| | | | ||||| | || Sbjct 12413 AAAGCAATAGAAGCCAAGTTACAAACAGCAACTTCATCGGGACTTGTATATTCGACAATT 12472 Query 77736 TCGGTACATAGATTACTACATTTGATAGTGCCCAGATTTTGTTGGTTGCTCTTTTTATTG 77795 || ||||| || ||||||||||| || || |||| ||||| || ||||||||| |||| Sbjct 12473 TCCGTACAAAGGTTACTACATTTAATGGTACCCAAGTTTTGCTGATTGCTCTTTCTATTA 12532 Query 77796 CATGAGTCCTTATAAAGAATAAACGGAGTCCCGGTTTCAATCTGTGATTCGATAATAGAT 77855 || | ||||| || || ||||| ||| | ||||||||| | |||| ||| | |||| Sbjct 12533 CAAGCATCCTTGTAGAGCATAAATGGATTACCGGTTTCAGTTTGTGCTTCCAAGATAGCA 12592 Query 77856 TTCCAGACGACTCTAG--CTTTTATCATAGATTTGTATCGCCTCTCTCTTTCATA--TTG 77911 | ||| | ||| | | | || || | | | || | || | |||||| || Sbjct 12593 TACCATA--ACTTTTGTGCCTTAATTGTCTCTCTCGCTCTTCCTTCGCGTTCATAGCTTT 12650 Query 77912 AGTATATAGCCGTTCAAATTCATCTCCCCAAACATCATCCAATCCAGGGCATTCATTTGG 77971 || | |||| |||| ||||| ||||||||||| | ||| ||||| |||||| || Sbjct 12651 CATAAAGAGCCA--CAAACTCATCACCCCAAACATCTTGCAAACCAGGTGCTTCATTAGG 12708 Query 77972 GCACATCAATGACCAGTCACCATCTTCCTTAACTCGTTTCATAAAGAGATCAGGTATCCA 78031 || | | ||||| || ||| | ||||| || |||| ||| |||||||| |||| ||| Sbjct 12709 ACAAAAGAGAGACCAATCTCCACCGTCCTTGACACGTTGCATGAAGAGATCGGGTACCCA 12768 Query 78032 TAGAGCAATAAATAGATCTCGGGTTCTATGTTCTTCATTTCCTGTATTCTTTTTAAGATC 78091 || ||| ||| | ||| |||| ||| ||| || || || |||||| | | ||| Sbjct 12769 AAGGGCATAAAACAAATCACGGGCTCTGATTTCATCCTTACCAAAGTTCTTTCTTAAATC 12828 Query 78092 GAGAAACTCCATAATATCAGAATGCCATGGTTCTAGATATATTGCCATAACTCCAGGTCG 78151 | ||| | ||||||| ||||||||| || ||||| || || | |||| || || Sbjct 12829 TAAAAAGGTAAAGATATCAGCATGCCATGGCTCGAGATACATGGCAAAGGCTCCTGGACG 12888 Query 78152 TTTATTACCTCCCTGATCTATATATCTGGCGGTGTTATTATAAACTCTCAACATTGGAAT 78211 || || || || ||||| | ||| | || |||||||| | || | |||||| |||| Sbjct 12889 CTTGTTGCCGCCTTGATCGACATAACGTGCTGTGTTATTGAATACACGCAACATGGGAAG 12948 Query 78212 AATACCGTTAGATGTTCCATTTGTTCCAGAAATATAACTTCCACTTGCGCGAATATTACT 78271 | |||||| || |||||||| || | |||||| |||| | || ||||||||| Sbjct 12949 CAAACCGTTCGAATAACCATTTGTACCGGCAATATAGGATCCATTGGCACGAATATTATG 13008 Query 78272 AATGGATATCCCTATTCCTCCTGCCATCTTAGATATTAGAGCGCAACGTTTCAATGTATC 78331 |||| | || || || ||||| | || || ||| | || || ||| ||||| || Sbjct 13009 AATGTTGAGACCGATACCACCTGCAGTTTTCGAAATTTGGGCACAGATTTTTAATGTTTC 13068 Query 78332 GTAGATACCCTCTATACTGTCATCCATCATGTTAAG-AAGAA--AACAGCTAGACATTTG 78388 ||||| || || || || ||| ||||| | || ||||| || || ||||| || Sbjct 13069 ATAGATGCCTTCAATTGAATCTTCCTTCATGGTGAGCAAGAAGCAAGAG---GACATCTG 13125 Query 78389 ATGATGAACAGTTCCTGCATTAAATAATGTCGGAGATGCATGCGTAAACCATTTTTCAGA 78448 | || || || || ||||| || || || ||| ||||| ||||| |||| || || Sbjct 13126 AGGACGAGGTGTACCGGCATTGAACAAAGTAGGACTGGCATGAGTAAAGAATTTCTCGGA 13185 Query 78449 AAGTAGATTGTATGTTTCAATAGCTGATTCTATGTC-CCATTGATGAATTCCTACCGCTA 78507 | | ||||| || || || || | || || || || | || || || | || | Sbjct 13186 CATCAAGTTGTAAGTCTCGATTGCAGCGTCAATATCTTCACCG-TGGATACCAATGGCGA 13244 Query 78508 CACGCATCAACATATGCTGAGGTCTTTCAACCGTCTTATTATTTATTTTCAACAAGTATG 78567 ||||||| | | ||| ||||| | || | ||||| | || || | | || | Sbjct 13245 CACGCATGATAAGATGTTGAGGACGCTCGGCGGTCTTGCCGTCAATCTTGAGTAGATAGG 13304 Query 78568 ATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCTCTCGTAAATAATAA 78627 || ||| | ||| || || |||||| |||||||| || ||||| || |||||||| Sbjct 13305 ATCGTTCAAGAGTCTTGAATCCAAAAAAGTTGTATTTGAAATCTCTGTCATAAATAATGG 13364 Query 78628 CAGAATTTAGTTTATCTTTGTATTTGGTAACAATATCCATGACAGTAGTT---GAAATAA 78684 | || || || ||| || | ||||| || | || ||| || || | Sbjct 13365 CTGAGTTCAGACGTTCTGCGTTGTCCTGAACAA---CCTTATAGGTTGTTTCGGATATCA 13421 Query 78685 TAGGAGATCGTACACCATTTTTAGGATTAACATAGTTAAATAAATCTTCCATTACATCAC 78744 | || || | | | || ||||| |||||||| | | ||| || || || | | Sbjct 13422 TGGGGGAGTGCTTGCTTGTCTTGGGATTCACATAGTTGTAGAGATCCTCAATCACTTGAG 13481 Query 78745 TAAATAGtttttttGTTTCCTTGTGTAGATTA 78776 ||||| || |||||||||||||||| |||| Sbjct 13482 AAAATACCTTCTTTGTTTCCTTGTGTAAATTA 13513 Score = 201 bits (222), Expect = 2e-46 Identities = 549/836 (66%), Gaps = 11/836 (1%) Strand=Plus/Plus Query 76781 TGTAAACTGAATTGGAGAAGATGCGGGTTTTGTACGTAGATAGTACATACCAGTTTTTAG 76840 |||||||| |||| | | ||| || |||||| | ||| |||||||| || || | Sbjct 11451 TGTAAACTTGATTGCATCAACTGCAGGACGTGTACGCAAATAATACATACCCGTCTTCAA 11510 Query 76841 ACCCAGACTCCATCCGTAGAAATGCATGCTTGTCAGTTTGGAATAACTAGGATCGGCTAT 76900 ||| ||| || ||||| ||||| |||||||| || | | | || || || || Sbjct 11511 TCCCTTTTGCCAACCATAGAAGTGCATACTTGTCAGCTTACCAAAGTTGGGTTCAGCAAT 11570 Query 76901 ATGAATATTCATCGACTGACTTTGATCGATGAAAGCTCCTCTATCAGCCGCCATTTTTAT 76960 | || |||| ||||||||||| ||| | || || | ||||| ||||| | | Sbjct 11571 AAAGATGTTCAAACTTTGACTTTGATCAATGTAGGCGCCACGGTCAGCGGCCATATCAAC 11630 Query 76961 AATGGTCTTTTGAGGAATTTCCCAAATAGTTTTGAAAACTTGTTTGATATCATCTGGAAG 77020 ||| || ||||| ||||||||||| ||| ||| | | | ||||| | | |||| Sbjct 11631 AATTGTACGTTGAGAAATTTCCCAAACAGTCTTGTAGAGCTCTTTGAGGTGTTGAGGAAT 11690 Query 77021 -GTTTGTA--TTTTGAATGGAACCACCATCTGATATAATTGTATTCTTTATATCATCATT 77077 || ||| ||||||| || |||||||| | || || | ||||| | ||||| || Sbjct 11691 TGTGGGTACATTTTGAACAGATCCACCATCGGCCATGATCATGTTCTTGACTTCATCGTT 11750 Query 77078 CCACAATTTCCTCTCTGTTAAAACTCTAAGGAGATGAGGATTAACTATTTGAAATTCTCC 77137 ||| | | | || ||| | | ||| | ||| || || |||||| |||| || Sbjct 11751 CCAGATACCCATATCAACCAAATCACGAAGTAACCAAGGGTTGACCATTTGATATTCACC 11810 Query 77138 AGACAATACTCTACGAGTGTAAATATTACTGGTATATGGTTCCACAGATTCATTGTTTCC 77197 || | || | ||| || |||| || || || || || | | |||||| || Sbjct 11811 CGAGAGCACACGACGGGTATAAAAGTTGGAAGTGTAAGGCTCAAAGCACTCATTGAAACC 11870 Query 77198 CAAAATTTGAGCAGTAGAAGCAGTTGGCATAGGTGCCACCAATAAACTATTTCTGAGACC 77257 ||| ||||||| || ||||| || |||||||| || | || | ||| | || || Sbjct 11871 CAACATTTGAGAGGTGGAAGCGGTAGGCATAGGGGCTAATAAGAGTGAATTGCGGACGCC 11930 Query 77258 ATGTGTTCTGATTTTATCTTTTAGATATTTCCAATCCCAAAGATCTGAAGGTACAACATC 77317 ||| | || || || ||||| | ||| ||||||||| | || |||| Sbjct 11931 ATGCTTGGCTATCTTTTCCTTTAGTGAAGCCCAGTCCCAAAGAGAGGTGGGAGTCACATT 11990 Query 77318 CCAAAGATCGTATTGTAGAATTCCGTTACTAGCATAT--GAT--CCATTATATGTTTCAT 77373 ||| | |||||||||| || || || | ||| || || | ||| ||||||| Sbjct 11991 CCACATGTCGTATTGTAATATGCCCTT----GGATACAGGACTACCCTCATAAGTTTCAT 12046 Query 77374 AAGGTCCTTCTGTTTCAGCTAGTTCACAACTCGCTTCCAATGCTCCGTAATAAATTGTTT 77433 ||||||| | ||||||| | ||| || |||||||| || ||| ||| || |||| Sbjct 12047 AAGGTCCGTACTTTTCAGCCAATTCGCATGAGGCTTCCAAGGCAGCGTGATAGATGGTTT 12106 Query 77434 CGAAAATCTTCTTATTGAGATCTTGTGCTTCAATACTATCAAACGGATAATGTAAAAGAA 77493 | || || | |||| | | || |||||| | ||||| || ||| |||| | Sbjct 12107 CAAAGATTTGAATATTTAATTGTTTGGCTTCAGGAGAGTCAAAGGGGTAACGTAAGGCCA 12166 Query 77494 TAAAGGCATCTGCTAATCCCTGAACTCCAATACCAATAGGTCTATGTCTCTTATTGGAAA 77553 | || | || |||||||| || || || | ||| ||||| | ||||||||| || || Sbjct 12167 TGAATGTGTCGGCTAATCCTTGGACACCTAAACCGATAGGACGATGTCTCTTGTTTGATC 12226 Query 77554 TTTTAGCTTCTGGAATAGGATAATAATTAATGTCTATAATTTTATTGAGATTTCTA 77609 ||| ||||| | ||| ||||| || || || ||||| || || | |||||| Sbjct 12227 TTTCTGCTTCAATGACAGGGTAATAGTTGATATCGATAATCTTGTTCAAGTTTCTA 12282 >seq3946 Length=52427 Score = 170 bits (188), Expect = 3e-37 Identities = 299/433 (69%), Gaps = 2/433 (0%) Strand=Plus/Plus Query 47852 TTGATATTCACCCACACGTTTCTCGAAAAAATTAGTTTTGCCTTCCAATGATATATTTTC 47911 |||||| ||| || || || || ||||| || || || |||| || ||| || | || Sbjct 26031 TTGATAATCAGAAACGCGCTTTTCAAAAAAGTTGGTCTTTCCTTGCAGTGAAATCATATC 26090 Query 47912 CATAAAATCAAATGGATTAACTGCATTATAAAtttttttAAATCCTAATTCTGAAATCAG 47971 |||||| ||||| ||||| ||| |||||||||| | || || | | || || Sbjct 26091 CATAAAGTCAAACGGATTCGTTGCCATATAAATTTTATCGAACCCAAGAGCAACCATAAG 26150 Query 47972 TCTATCTGCAACGAATTCTATATATCTTTTCATCATTTCACAATTCATTCCTATAAGTTT 48031 | ||| ||||||||||| || ||| ||||| | ||||||| || || | | Sbjct 26151 ACGATCAGCAACGAATTCAATGTATTGACACATCAAAGTAGAATTCATACCAATCAATGC 26210 Query 48032 AACTGGTAGAGCCTCCGTAAGAAACTCTTGTTCGATAGTGACAGCATCCACTATTATCGA 48091 ||| |||| || || || | || |||||||| || ||||| |||| ||| || Sbjct 26211 AACAGGTAATGCATCGGTTAAGAATTCTTGTTCAATGCCTACAGCTTCCATTATAATATC 26270 Query 48092 TGTTACCGTTTCCTCACTTGGTGGAT-ACAACAAATGTTTAAACATTAAACATGCAAAAT 48150 | || || | || ||| | | || | | ||| |||||| | ||| || |||| Sbjct 26271 CTTCACACGTTGTTGGCTAGGTTGTTTACGA-ATATGAGTAAACAAAAGACAAGCGAAAT 26329 Query 48151 CACAATGAAGACCTTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGACCGGGCATTA 48210 | |||||||||||| || | || ||| ||||| ||| ||| || | ||||||||| | Sbjct 26330 CGGTATGAAGACCTTCGTCACGACAAATCAATTCATTACTAAAAGTCAAACCGGGCATCA 26389 Query 48211 GTCCACGTTTTTTGAGCCAAAATATTGCCGCGAAAGATCCAGAAAAGAATATGCCTTCTA 48270 |||||||| || |||||||| || | || || || || ||||||||||| ||||||| Sbjct 26390 AACCACGTTTCTTAAGCCAAAAAATAGAAGCAAATGAGCCGGAAAAGAATATACCTTCTA 26449 Query 48271 CGGCCGCAAATGC 48283 | || ||||| || Sbjct 26450 CTGCAGCAAAAGC 26462 Score = 154 bits (170), Expect = 2e-32 Identities = 230/323 (71%), Gaps = 5/323 (2%) Strand=Plus/Plus Query 48361 TTGTTTCTATAGCATTAAAGAGAAAGtttttttCATTGCTATCTTTAACGTAAGTATCTA 48420 |||| || |||||| || || | | |||||| | |||||| | || ||||| | Sbjct 26598 TTGTATCAATAGCAGAGAAAAGCATTTCTTTTTCTTCATCATCTTTTATATAGGTATCAA 26657 Query 48421 TTAAAAGACTATACATTTCGGAGTGAATATTTTCAATTGCCATCTGAAATCCGTAAAAAC 48480 | |||||||| || |||| ||||||||||||||||| || ||||| || ||||||| Sbjct 26658 TCAAAAGACTGTATGTTTCTGAGTGAATATTTTCAATCATGATTTGAAAGCCATAAAAAC 26717 Query 48481 ATCTCGCTTCTGTGATCTGTACCTCCGTACAAAATCGTTCAGCCAAATTCTCATTTACTA 48540 || | ||||| | || | || || |||||| || ||||||| |||||||| | Sbjct 26718 ATTTAGCTTCAGGAATTTTGACTTCATCACAAAAGTTTTGCACCAAATTTTCATTTACAA 26777 Query 48541 TTCCATCACTAGC-AGCAAAAAATGCTAATACATGTTTAATAAAATATTTTTCGTTGGAA 48599 | |||||| ||| ||||| || || || || | ||||||| || || || | Sbjct 26778 TACCATCA-GAGCTGGCAAAGAAAGCCAAAACGCGAGAAATAAAAAATCGCTCATTCTCA 26836 Query 48600 GTCAGTTTATT---CCAGTCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAA 48656 |||| ||| || ||| ||||| |||| | || ||||| |||||||||||||||| Sbjct 26837 GTCATTTTGTTTTCCCAATCATTTTGATCTCTACTTAAATCTATTTCTTCAGCTGTCCAA 26896 Query 48657 AATGATGCCTCTGCTTTTTTATA 48679 || ||||| ||||| || ||||| Sbjct 26897 AAAGATGCTTCTGCCTTCTTATA 26919 >seq4556 Length=51470 Score = 167 bits (184), Expect = 3e-36 Identities = 299/435 (69%), Gaps = 4/435 (1%) Strand=Plus/Plus Query 47852 TTGATATTCACCCACACGTTTCTCGAAAAAATTAGTTTTGCCTTCCAATGATATATTTTC 47911 |||||| ||| ||||| || || ||||| || || ||||||| | || || | || Sbjct 9583 TTGATAATCAGAAACACGCTTTTCAAAAAAGTTGGTCTTGCCTTGAAGGGAGATCATGTC 9642 Query 47912 CATAAAATCAAATGGATTAACTGCATTATAAAtttttttAAATCCTAATTCTGAAATCAG 47971 |||||| || ||||| ||| ||||| ||||| || | ||||| | | || || Sbjct 9643 CATAAAGTCGAATGGGTTAGTAGCATTGTAAATCTTGTCGAATCCAAGAGCGACCATGAG 9702 Query 47972 TCTATCTGCAACGAATTCTATATATCTTTTCATCATTTCACAATTCATTCCTATAAGTTT 48031 | ||| || |||||||| ||||| ||||| | ||||| || || | | Sbjct 9703 ACGATCAGCGACGAATTCGATATACTGACACATCAAGGTAGCGTTCATACCGATCAATGC 9762 Query 48032 AACTGGTAGAGCCTCCGTAAGAAACTCTTGTTCGATAGTGACAGCATCCACTATTATCGA 48091 ||| || ||||| |||| || || |||||||||||| ||| || || || || || Sbjct 9763 AACAGGCAGAGCATCCGACAGGAATTCTTGTTCGATACCGACGGCTTCTACAATGATGTC 9822 Query 48092 TGTTACCGTTTCCTCACTTGGTGGATACAACAAATGTT--TAAACATTAAACATGCAAAA 48149 | || || | ||| ||| | | || |||| | |||| | ||| ||||| Sbjct 9823 CTTGACGCGTTGTTGACTGGGTTGTTT--ACGGATGTGGGTGAACAAGAGACAGGCAAAG 9880 Query 48150 TCACAATGAAGACCTTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGACCGGGCATT 48209 ||| |||||||||||||| | || || ||||| ||| ||| || | ||||||||| Sbjct 9881 TCAGTGTGAAGACCTTCATCACGACAGATCAATTCATTACTAAAGGTCAAACCGGGCATC 9940 Query 48210 AGTCCACGTTTTTTGAGCCAAAATATTGCCGCGAAAGATCCAGAAAAGAATATGCCTTCT 48269 | |||||||| || | |||||| || | ||||| || ||||||||||| |||||||| Sbjct 9941 AAACCACGTTTCTTTAACCAAAAGATGGAGGCGAATGAGCCAGAAAAGAAGATGCCTTCG 10000 Query 48270 ACGGCCGCAAATGCG 48284 || || ||||| ||| Sbjct 10001 ACAGCGGCAAAGGCG 10015 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694629151778240